RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
NEK4-206ENST00000496822 CEP170BQ9Y4F5 1589 aaPredicted RBP23.66■■□□□ 1.38
NEK4-206ENST00000496822 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
NEK4-206ENST00000496822 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
NEK4-206ENST00000496822 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.38
NEK4-206ENST00000496822 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
NEK4-206ENST00000496822 PTPRTO14522 1441 aa23.64■■□□□ 1.37
NEK4-206ENST00000496822 ABCC5O15440 1437 aa23.64■■□□□ 1.37
NEK4-206ENST00000496822 PZPP20742 1482 aa23.62■■□□□ 1.37
NEK4-206ENST00000496822 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
NEK4-206ENST00000496822 CERKQ8TCT0 537 aa23.62■■□□□ 1.37
NEK4-206ENST00000496822 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
NEK4-206ENST00000496822 SHANK2Q9UPX8 1470 aa23.62■■□□□ 1.37
NEK4-206ENST00000496822 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
NEK4-206ENST00000496822 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
NEK4-206ENST00000496822 MROH1Q8NDA8 1641 aa23.61■■□□□ 1.37
NEK4-206ENST00000496822 DAPK1P53355 1430 aa23.59■■□□□ 1.37
NEK4-206ENST00000496822 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
NEK4-206ENST00000496822 ABCC3O15438 1527 aa23.59■■□□□ 1.37
NEK4-206ENST00000496822 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
NEK4-206ENST00000496822 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
NEK4-206ENST00000496822 TNRQ92752 1358 aa23.58■■□□□ 1.37
NEK4-206ENST00000496822 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
NEK4-206ENST00000496822 KIF15Q9NS87 1388 aa23.57■■□□□ 1.36
NEK4-206ENST00000496822 NCKAP5LQ9HCH0 1330 aa23.57■■□□□ 1.36
NEK4-206ENST00000496822 ZC3H13Q5T200 1668 aaKnown RBP23.54■■□□□ 1.36
NEK4-206ENST00000496822 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
NEK4-206ENST00000496822 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
NEK4-206ENST00000496822 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
NEK4-206ENST00000496822 CEP152O94986 1710 aa23.5■■□□□ 1.35
NEK4-206ENST00000496822 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
NEK4-206ENST00000496822 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
NEK4-206ENST00000496822 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
NEK4-206ENST00000496822 PKD2Q13563 968 aa23.47■■□□□ 1.35
NEK4-206ENST00000496822 NLRP1Q9C000 1473 aa23.47■■□□□ 1.35
NEK4-206ENST00000496822 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
NEK4-206ENST00000496822 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
NEK4-206ENST00000496822 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
NEK4-206ENST00000496822 NEURL4Q96JN8 1562 aa23.44■■□□□ 1.34
NEK4-206ENST00000496822 ZNF335Q9H4Z2 1342 aaPredicted RBP23.43■■□□□ 1.34
NEK4-206ENST00000496822 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
NEK4-206ENST00000496822 FAM50AQ14320 339 aaKnown RBP23.42■■□□□ 1.34
NEK4-206ENST00000496822 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
NEK4-206ENST00000496822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
NEK4-206ENST00000496822 POLR1AO95602 1720 aaPredicted RBP23.41■■□□□ 1.34
NEK4-206ENST00000496822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.39■■□□□ 1.33
NEK4-206ENST00000496822 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
NEK4-206ENST00000496822 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
NEK4-206ENST00000496822 THEMISQ8N1K5 641 aaPredicted RBP23.35■■□□□ 1.33
NEK4-206ENST00000496822 IQSEC2Q5JU85 1478 aa23.35■■□□□ 1.33
NEK4-206ENST00000496822 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.33
NEK4-206ENST00000496822 KANK1Q14678 1352 aa23.33■■□□□ 1.33
NEK4-206ENST00000496822 CFAP65Q6ZU64 1925 aaKnown RBP23.32■■□□□ 1.32
NEK4-206ENST00000496822 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
NEK4-206ENST00000496822 UBR1Q8IWV7 1749 aa23.31■■□□□ 1.32
NEK4-206ENST00000496822 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
NEK4-206ENST00000496822 NPHP4O75161 1426 aaPredicted RBP23.3■■□□□ 1.32
NEK4-206ENST00000496822 ANKRD50Q9ULJ7 1429 aa23.3■■□□□ 1.32
NEK4-206ENST00000496822 MED14O60244 1454 aa23.3■■□□□ 1.32
NEK4-206ENST00000496822 EFCAB6Q5THR3 1501 aa23.28■■□□□ 1.32
NEK4-206ENST00000496822 IQGAP1P46940 1657 aa23.25■■□□□ 1.31
NEK4-206ENST00000496822 SYNMO15061 1565 aa23.25■■□□□ 1.31
NEK4-206ENST00000496822 PIK3C2BO00750 1634 aa23.25■■□□□ 1.31
NEK4-206ENST00000496822 ARHGAP23Q9P227 1491 aa23.23■■□□□ 1.31
NEK4-206ENST00000496822 SLIT1O75093 1534 aa23.22■■□□□ 1.31
NEK4-206ENST00000496822 ROCK1Q13464 1354 aa23.21■■□□□ 1.31
NEK4-206ENST00000496822 NOS1P29475 1434 aa23.21■■□□□ 1.31
NEK4-206ENST00000496822 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
NEK4-206ENST00000496822 CPS1P31327 1500 aa23.21■■□□□ 1.31
NEK4-206ENST00000496822 UNC13BO14795 1591 aa23.2■■□□□ 1.3
NEK4-206ENST00000496822 LTKP29376 864 aa23.18■■□□□ 1.3
NEK4-206ENST00000496822 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
NEK4-206ENST00000496822 ITGAEP38570 1179 aa23.17■■□□□ 1.3
NEK4-206ENST00000496822 IDI1Q13907 227 aa23.17■■□□□ 1.3
NEK4-206ENST00000496822 TET3O43151 1660 aa23.16■■□□□ 1.3
NEK4-206ENST00000496822 TMEM2Q9UHN6 1383 aa23.15■■□□□ 1.3
NEK4-206ENST00000496822 STRCP1A6NGW2 1772 aa23.14■■□□□ 1.3
NEK4-206ENST00000496822 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
NEK4-206ENST00000496822 RPRD2Q5VT52 1461 aaKnown RBP23.14■■□□□ 1.29
NEK4-206ENST00000496822 TXNDC2Q86VQ3 553 aa23.14■■□□□ 1.29
NEK4-206ENST00000496822 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
NEK4-206ENST00000496822 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
NEK4-206ENST00000496822 GCC2Q8IWJ2 1684 aa23.12■■□□□ 1.29
NEK4-206ENST00000496822 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
NEK4-206ENST00000496822 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
NEK4-206ENST00000496822 EID1Q9Y6B2 187 aa23.09■■□□□ 1.29
NEK4-206ENST00000496822 E9PCH4 1651 aa23.08■■□□□ 1.29
NEK4-206ENST00000496822 LRRC7Q96NW7 1537 aa23.08■■□□□ 1.28
NEK4-206ENST00000496822 SLC52A1Q9NWF4 448 aa23.06■■□□□ 1.28
NEK4-206ENST00000496822 ALKQ9UM73 1620 aa23.06■■□□□ 1.28
NEK4-206ENST00000496822 NUP155O75694 1391 aa23.03■■□□□ 1.28
NEK4-206ENST00000496822 PIP4K2BP78356 416 aa23.02■■□□□ 1.28
NEK4-206ENST00000496822 TMEM131LA2VDJ0 1609 aa23.01■■□□□ 1.27
NEK4-206ENST00000496822 SCAF1Q9H7N4 1312 aaKnown RBP23.01■■□□□ 1.27
NEK4-206ENST00000496822 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
NEK4-206ENST00000496822 ZFYVE9O95405 1425 aa23■■□□□ 1.27
NEK4-206ENST00000496822 TOM1O60784 492 aa23■■□□□ 1.27
NEK4-206ENST00000496822 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
NEK4-206ENST00000496822 DISP3Q9P2K9 1392 aa22.97■■□□□ 1.27
NEK4-206ENST00000496822 RIMS2Q9UQ26 1411 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms