RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 PZPP20742 1482 aa14.09□□□□□ -0.15
SORT1-208ENST00000495777 KDM5DQ9BY66 1539 aa14.09□□□□□ -0.15
SORT1-208ENST00000495777 TNRQ92752 1358 aa14.09□□□□□ -0.15
SORT1-208ENST00000495777 DNMT1P26358 1616 aaKnown RBP14.08□□□□□ -0.15
SORT1-208ENST00000495777 KIF3BO15066 747 aa14.08□□□□□ -0.16
SORT1-208ENST00000495777 FBXO31Q5XUX0 539 aaPredicted RBP14.07□□□□□ -0.16
SORT1-208ENST00000495777 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
SORT1-208ENST00000495777 SPATA31D1Q6ZQQ2 1576 aa14.07□□□□□ -0.16
SORT1-208ENST00000495777 SOCS7O14512 581 aa14.06□□□□□ -0.16
SORT1-208ENST00000495777 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
SORT1-208ENST00000495777 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
SORT1-208ENST00000495777 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
SORT1-208ENST00000495777 MIA2Q96PC5 1412 aa14.04□□□□□ -0.16
SORT1-208ENST00000495777 NLRP1Q9C000 1473 aa14.04□□□□□ -0.16
SORT1-208ENST00000495777 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
SORT1-208ENST00000495777 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.16
SORT1-208ENST00000495777 TSPY4P0CV99 314 aa14.02□□□□□ -0.17
SORT1-208ENST00000495777 TSPY10P0CW01 314 aa14.02□□□□□ -0.17
SORT1-208ENST00000495777 CPS1P31327 1500 aa14.01□□□□□ -0.17
SORT1-208ENST00000495777 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
SORT1-208ENST00000495777 MED14O60244 1454 aa14□□□□□ -0.17
SORT1-208ENST00000495777 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
SORT1-208ENST00000495777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
SORT1-208ENST00000495777 THEMISQ8N1K5 641 aaPredicted RBP14□□□□□ -0.17
SORT1-208ENST00000495777 RNF17Q9BXT8 1623 aaKnown RBP14□□□□□ -0.17
SORT1-208ENST00000495777 MAP3K1Q13233 1512 aa14□□□□□ -0.17
SORT1-208ENST00000495777 ANKLE2Q86XL3 938 aa13.99□□□□□ -0.17
SORT1-208ENST00000495777 UGGT1Q9NYU2 1555 aa13.99□□□□□ -0.17
SORT1-208ENST00000495777 ABCC3O15438 1527 aa13.99□□□□□ -0.17
SORT1-208ENST00000495777 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
SORT1-208ENST00000495777 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
SORT1-208ENST00000495777 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
SORT1-208ENST00000495777 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
SORT1-208ENST00000495777 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
SORT1-208ENST00000495777 EIF2AK4Q9P2K8 1649 aaKnown RBP13.96□□□□□ -0.17
SORT1-208ENST00000495777 MYOM3Q5VTT5 1437 aa13.96□□□□□ -0.18
SORT1-208ENST00000495777 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
SORT1-208ENST00000495777 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
SORT1-208ENST00000495777 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
SORT1-208ENST00000495777 TOM1O60784 492 aa13.94□□□□□ -0.18
SORT1-208ENST00000495777 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
SORT1-208ENST00000495777 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
SORT1-208ENST00000495777 HSPA1LP34931 641 aa13.92□□□□□ -0.18
SORT1-208ENST00000495777 ALKQ9UM73 1620 aa13.91□□□□□ -0.18
SORT1-208ENST00000495777 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
SORT1-208ENST00000495777 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
SORT1-208ENST00000495777 IQGAP1P46940 1657 aa13.9□□□□□ -0.18
SORT1-208ENST00000495777 PRDM15P57071 1507 aaPredicted RBP13.89□□□□□ -0.19
SORT1-208ENST00000495777 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
SORT1-208ENST00000495777 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
SORT1-208ENST00000495777 KIF15Q9NS87 1388 aa13.88□□□□□ -0.19
SORT1-208ENST00000495777 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
SORT1-208ENST00000495777 ABCC5O15440 1437 aa13.88□□□□□ -0.19
SORT1-208ENST00000495777 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
SORT1-208ENST00000495777 SLIT1O75093 1534 aa13.87□□□□□ -0.19
SORT1-208ENST00000495777 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
SORT1-208ENST00000495777 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
SORT1-208ENST00000495777 SYNMO15061 1565 aa13.86□□□□□ -0.19
SORT1-208ENST00000495777 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
SORT1-208ENST00000495777 LTKP29376 864 aa13.84□□□□□ -0.19
SORT1-208ENST00000495777 CEP152O94986 1710 aa13.84□□□□□ -0.19
SORT1-208ENST00000495777 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.19
SORT1-208ENST00000495777 DAPK1P53355 1430 aa13.83□□□□□ -0.2
SORT1-208ENST00000495777 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
SORT1-208ENST00000495777 RRP7BPQ9NSQ0 103 aa13.83□□□□□ -0.2
SORT1-208ENST00000495777 PTPN23Q9H3S7 1636 aa13.82□□□□□ -0.2
SORT1-208ENST00000495777 LMTK2Q8IWU2 1503 aa13.82□□□□□ -0.2
SORT1-208ENST00000495777 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
SORT1-208ENST00000495777 TXNDC2Q86VQ3 553 aa13.81□□□□□ -0.2
SORT1-208ENST00000495777 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
SORT1-208ENST00000495777 EID1Q9Y6B2 187 aa13.79□□□□□ -0.2
SORT1-208ENST00000495777 KANK1Q14678 1352 aa13.79□□□□□ -0.2
SORT1-208ENST00000495777 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
SORT1-208ENST00000495777 PIK3C2BO00750 1634 aa13.78□□□□□ -0.2
SORT1-208ENST00000495777 KDM5AP29375 1690 aaKnown RBP13.77□□□□□ -0.21
SORT1-208ENST00000495777 NOS1P29475 1434 aa13.77□□□□□ -0.21
SORT1-208ENST00000495777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
SORT1-208ENST00000495777 EFCAB6Q5THR3 1501 aa13.76□□□□□ -0.21
SORT1-208ENST00000495777 ADGRL2O95490 1459 aa13.76□□□□□ -0.21
SORT1-208ENST00000495777 APLP2Q06481 763 aa13.76□□□□□ -0.21
SORT1-208ENST00000495777 IDI1Q13907 227 aa13.76□□□□□ -0.21
SORT1-208ENST00000495777 CHIC2Q9UKJ5 165 aa13.74□□□□□ -0.21
SORT1-208ENST00000495777 TET3O43151 1660 aa13.74□□□□□ -0.21
SORT1-208ENST00000495777 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
SORT1-208ENST00000495777 KCNA6P17658 529 aa13.72□□□□□ -0.21
SORT1-208ENST00000495777 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
SORT1-208ENST00000495777 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
SORT1-208ENST00000495777 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
SORT1-208ENST00000495777 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
SORT1-208ENST00000495777 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
SORT1-208ENST00000495777 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.21
SORT1-208ENST00000495777 RPRD2Q5VT52 1461 aaKnown RBP13.71□□□□□ -0.21
SORT1-208ENST00000495777 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
SORT1-208ENST00000495777 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SORT1-208ENST00000495777 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
SORT1-208ENST00000495777 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
SORT1-208ENST00000495777 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
SORT1-208ENST00000495777 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
SORT1-208ENST00000495777 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
SORT1-208ENST00000495777 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms