RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 CAMSAP2Q08AD1 1489 aa34.48■■■■□ 3.11
PFDN4-205ENST00000493356 NCOA2Q15596 1464 aa34.48■■■■□ 3.11
PFDN4-205ENST00000493356 KIF3BO15066 747 aa34.47■■■■□ 3.11
PFDN4-205ENST00000493356 KDM5DQ9BY66 1539 aa34.46■■■■□ 3.11
PFDN4-205ENST00000493356 FAM135AQ9P2D6 1515 aa34.45■■■■□ 3.11
PFDN4-205ENST00000493356 TNRQ92752 1358 aa34.44■■■■□ 3.1
PFDN4-205ENST00000493356 PZPP20742 1482 aa34.44■■■■□ 3.1
PFDN4-205ENST00000493356 POLR1AO95602 1720 aaPredicted RBP34.44■■■■□ 3.1
PFDN4-205ENST00000493356 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
PFDN4-205ENST00000493356 RSPH4AQ5TD94 716 aa34.41■■■■□ 3.1
PFDN4-205ENST00000493356 NEURL4Q96JN8 1562 aa34.4■■■■□ 3.1
PFDN4-205ENST00000493356 ARHGEF5Q12774 1597 aa34.37■■■■□ 3.09
PFDN4-205ENST00000493356 WASHC2CQ9Y4E1 1318 aa34.36■■■■□ 3.09
PFDN4-205ENST00000493356 CPS1P31327 1500 aa34.3■■■■□ 3.08
PFDN4-205ENST00000493356 MIA2Q96PC5 1412 aa34.3■■■■□ 3.08
PFDN4-205ENST00000493356 NLRP1Q9C000 1473 aa34.29■■■■□ 3.08
PFDN4-205ENST00000493356 SHANK2Q9UPX8 1470 aa34.28■■■■□ 3.08
PFDN4-205ENST00000493356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.28■■■■□ 3.08
PFDN4-205ENST00000493356 TSPY4P0CV99 314 aa34.28■■■■□ 3.08
PFDN4-205ENST00000493356 TSPY10P0CW01 314 aa34.28■■■■□ 3.08
PFDN4-205ENST00000493356 ANKLE2Q86XL3 938 aa34.26■■■■□ 3.08
PFDN4-205ENST00000493356 UGGT1Q9NYU2 1555 aa34.25■■■■□ 3.07
PFDN4-205ENST00000493356 THEMISQ8N1K5 641 aaPredicted RBP34.25■■■■□ 3.07
PFDN4-205ENST00000493356 RNF17Q9BXT8 1623 aaKnown RBP34.24■■■■□ 3.07
PFDN4-205ENST00000493356 LRRC9Q6ZRR7 1453 aa34.22■■■■□ 3.07
PFDN4-205ENST00000493356 VWDEQ8N2E2 1590 aa34.22■■■■□ 3.07
PFDN4-205ENST00000493356 DEPDC5O75140 1603 aa34.22■■■■□ 3.07
PFDN4-205ENST00000493356 MAST1Q9Y2H9 1570 aa34.21■■■■□ 3.07
PFDN4-205ENST00000493356 MED14O60244 1454 aa34.2■■■■□ 3.07
PFDN4-205ENST00000493356 SCAF1Q9H7N4 1312 aaKnown RBP34.19■■■■□ 3.06
PFDN4-205ENST00000493356 ABCC3O15438 1527 aa34.19■■■■□ 3.06
PFDN4-205ENST00000493356 ZC3H13Q5T200 1668 aaKnown RBP34.19■■■■□ 3.06
PFDN4-205ENST00000493356 TOM1O60784 492 aa34.18■■■■□ 3.06
PFDN4-205ENST00000493356 NPHP4O75161 1426 aaPredicted RBP34.18■■■■□ 3.06
PFDN4-205ENST00000493356 VPS8Q8N3P4 1428 aa34.18■■■■□ 3.06
PFDN4-205ENST00000493356 PIP4K2BP78356 416 aa34.17■■■■□ 3.06
PFDN4-205ENST00000493356 HSPA1LP34931 641 aa34.16■■■■□ 3.06
PFDN4-205ENST00000493356 EIF2AK4Q9P2K8 1649 aaKnown RBP34.15■■■■□ 3.06
PFDN4-205ENST00000493356 IQGAP1P46940 1657 aa34.13■■■■□ 3.05
PFDN4-205ENST00000493356 MROH1Q8NDA8 1641 aa34.12■■■■□ 3.05
PFDN4-205ENST00000493356 ERVK-7P63135 1459 aa34.1■■■■□ 3.05
PFDN4-205ENST00000493356 MED1Q15648 1581 aaPredicted RBP34.08■■■■□ 3.05
PFDN4-205ENST00000493356 ALKQ9UM73 1620 aa34.07■■■■□ 3.04
PFDN4-205ENST00000493356 MAP3K1Q13233 1512 aa34.06■■■■□ 3.04
PFDN4-205ENST00000493356 KANK4Q5T7N3 995 aaPredicted RBP34.06■■■■□ 3.04
PFDN4-205ENST00000493356 CEP152O94986 1710 aa34.06■■■■□ 3.04
PFDN4-205ENST00000493356 MYOM3Q5VTT5 1437 aa34.05■■■■□ 3.04
PFDN4-205ENST00000493356 STRCP1A6NGW2 1772 aa34.04■■■■□ 3.04
PFDN4-205ENST00000493356 CFAP65Q6ZU64 1925 aaKnown RBP34.02■■■■□ 3.04
PFDN4-205ENST00000493356 DUOX2Q9NRD8 1548 aa34.01■■■■□ 3.04
PFDN4-205ENST00000493356 UBR1Q8IWV7 1749 aa34.01■■■■□ 3.03
PFDN4-205ENST00000493356 LOC105371045A0A1W2PR82 267 aa33.99■■■■□ 3.03
PFDN4-205ENST00000493356 LRRC7Q96NW7 1537 aa33.98■■■■□ 3.03
PFDN4-205ENST00000493356 SYNMO15061 1565 aa33.97■■■■□ 3.03
PFDN4-205ENST00000493356 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
PFDN4-205ENST00000493356 SCAF11Q99590 1463 aaKnown RBP33.92■■■■□ 3.02
PFDN4-205ENST00000493356 CROCC2H7BZ55 1655 aa33.91■■■■□ 3.02
PFDN4-205ENST00000493356 KIF15Q9NS87 1388 aa33.91■■■■□ 3.02
PFDN4-205ENST00000493356 ARHGAP31Q2M1Z3 1444 aa33.9■■■■□ 3.02
PFDN4-205ENST00000493356 ARHGAP23Q9P227 1491 aa33.89■■■■□ 3.02
PFDN4-205ENST00000493356 SLIT1O75093 1534 aa33.89■■■■□ 3.02
PFDN4-205ENST00000493356 ERBINQ96RT1 1412 aa33.87■■■■□ 3.01
PFDN4-205ENST00000493356 ABCC5O15440 1437 aa33.87■■■■□ 3.01
PFDN4-205ENST00000493356 LTKP29376 864 aa33.86■■■■□ 3.01
PFDN4-205ENST00000493356 PTPN23Q9H3S7 1636 aa33.84■■■■□ 3.01
PFDN4-205ENST00000493356 TXNDC2Q86VQ3 553 aa33.83■■■■□ 3.01
PFDN4-205ENST00000493356 RRP7BPQ9NSQ0 103 aa33.83■■■■□ 3.01
PFDN4-205ENST00000493356 PIK3C2BO00750 1634 aa33.8■■■■□ 3
PFDN4-205ENST00000493356 SENP3Q9H4L4 574 aaPredicted RBP33.79■■■■□ 3
PFDN4-205ENST00000493356 PHF23Q9BUL5 403 aaPredicted RBP33.78■■■■□ 3
PFDN4-205ENST00000493356 DAPK1P53355 1430 aa33.78■■■■□ 3
PFDN4-205ENST00000493356 XIRP1Q702N8 1843 aaKnown RBP33.77■■■■□ 3
PFDN4-205ENST00000493356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.77■■■■□ 33e-7■■□□□ 11.7
PFDN4-205ENST00000493356 EID1Q9Y6B2 187 aa33.76■■■□□ 2.99
PFDN4-205ENST00000493356 TMEM2Q9UHN6 1383 aa33.73■■■□□ 2.99
PFDN4-205ENST00000493356 KANK1Q14678 1352 aa33.72■■■□□ 2.99
PFDN4-205ENST00000493356 KDM5AP29375 1690 aaKnown RBP33.71■■■□□ 2.99
PFDN4-205ENST00000493356 FGD6Q6ZV73 1430 aa33.7■■■□□ 2.99
PFDN4-205ENST00000493356 LMTK2Q8IWU2 1503 aa33.69■■■□□ 2.98
PFDN4-205ENST00000493356 APLP2Q06481 763 aa33.68■■■□□ 2.98
PFDN4-205ENST00000493356 EFCAB6Q5THR3 1501 aa33.68■■■□□ 2.98
PFDN4-205ENST00000493356 STAG3Q9UJ98 1225 aa33.67■■■□□ 2.98
PFDN4-205ENST00000493356 ANKRD30AQ9BXX3 1397 aa33.65■■■□□ 2.98
PFDN4-205ENST00000493356 IDI1Q13907 227 aa33.64■■■□□ 2.98
PFDN4-205ENST00000493356 CHIC2Q9UKJ5 165 aa33.63■■■□□ 2.97
PFDN4-205ENST00000493356 TET3O43151 1660 aa33.59■■■□□ 2.97
PFDN4-205ENST00000493356 NOS1P29475 1434 aa33.59■■■□□ 2.97
PFDN4-205ENST00000493356 TMEM94Q12767 1356 aa33.58■■■□□ 2.97
PFDN4-205ENST00000493356 FAM135BQ49AJ0 1406 aa33.57■■■□□ 2.96
PFDN4-205ENST00000493356 ADGRB3O60242 1522 aa33.56■■■□□ 2.96
PFDN4-205ENST00000493356 KCNA6P17658 529 aa33.55■■■□□ 2.96
PFDN4-205ENST00000493356 SLC26A8Q96RN1 970 aa33.54■■■□□ 2.96
PFDN4-205ENST00000493356 ADGRL2O95490 1459 aa33.53■■■□□ 2.96
PFDN4-205ENST00000493356 RGS17Q9UGC6 210 aaPredicted RBP33.52■■■□□ 2.96
PFDN4-205ENST00000493356 NWD1Q149M9 1564 aa33.49■■■□□ 2.95
PFDN4-205ENST00000493356 PROSER2Q86WR7 435 aaPredicted RBP33.48■■■□□ 2.95
PFDN4-205ENST00000493356 SLC52A1Q9NWF4 448 aa33.48■■■□□ 2.95
PFDN4-205ENST00000493356 ROBO1Q9Y6N7 1651 aa33.48■■■□□ 2.95
PFDN4-205ENST00000493356 NKTRP30414 1462 aaKnown RBP33.47■■■□□ 2.95
PFDN4-205ENST00000493356 RBM33Q96EV2 1170 aaKnown RBP33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms