RNA–Protein interactions for RNA: ENST00000493222.5

UGP2-223, Transcript of UDP-glucose pyrophosphorylase 2, human

TSL 3

Gene UGP2, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UGP2-223	ENST00000493222	PTPRT	O14522	1441 aa		32.72	■■■□□ 2.83
UGP2-223	ENST00000493222	KIF3B	O15066	747 aa		32.72	■■■□□ 2.83
UGP2-223	ENST00000493222	CERK	Q8TCT0	537 aa		32.7	■■■□□ 2.83
UGP2-223	ENST00000493222	CROCC2	H7BZ55	1655 aa		32.69	■■■□□ 2.82
UGP2-223	ENST00000493222	RNF17	Q9BXT8	1623 aa	Known RBP	32.68	■■■□□ 2.82
UGP2-223	ENST00000493222	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.67	■■■□□ 2.82
UGP2-223	ENST00000493222	APLP2	Q06481	763 aa		32.67	■■■□□ 2.82
UGP2-223	ENST00000493222	PTPN23	Q9H3S7	1636 aa		32.66	■■■□□ 2.82
UGP2-223	ENST00000493222	PZP	P20742	1482 aa		32.63	■■■□□ 2.81
UGP2-223	ENST00000493222	ZC3H13	Q5T200	1668 aa	Known RBP	32.62	■■■□□ 2.81
UGP2-223	ENST00000493222	PLA2R1	Q13018	1463 aa		32.61	■■■□□ 2.81
UGP2-223	ENST00000493222	A2ML1	A8K2U0	1454 aa		32.59	■■■□□ 2.81
UGP2-223	ENST00000493222	DNMT1	P26358	1616 aa	Known RBP	32.59	■■■□□ 2.81
UGP2-223	ENST00000493222	WASHC2C	Q9Y4E1	1318 aa		32.58	■■■□□ 2.81
UGP2-223	ENST00000493222	SHANK2	Q9UPX8	1470 aa		32.56	■■■□□ 2.8
UGP2-223	ENST00000493222	MROH1	Q8NDA8	1641 aa		32.55	■■■□□ 2.8
UGP2-223	ENST00000493222	DUOX2	Q9NRD8	1548 aa		32.55	■■■□□ 2.8
UGP2-223	ENST00000493222	TNR	Q92752	1358 aa		32.55	■■■□□ 2.8
UGP2-223	ENST00000493222	CEP152	O94986	1710 aa		32.54	■■■□□ 2.8
UGP2-223	ENST00000493222	TCOF1	Q13428	1488 aa	Known RBP	32.54	■■■□□ 2.8
UGP2-223	ENST00000493222	FGD6	Q6ZV73	1430 aa		32.53	■■■□□ 2.8
UGP2-223	ENST00000493222	ABCC3	O15438	1527 aa		32.53	■■■□□ 2.8
UGP2-223	ENST00000493222	LTBP4	Q8N2S1	1624 aa		32.53	■■■□□ 2.8
UGP2-223	ENST00000493222	POLR1A	O95602	1720 aa	Predicted RBP	32.53	■■■□□ 2.8
UGP2-223	ENST00000493222	NCKAP5L	Q9HCH0	1330 aa		32.51	■■■□□ 2.8
UGP2-223	ENST00000493222	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.51	■■■□□ 2.79
UGP2-223	ENST00000493222	ABCC5	O15440	1437 aa		32.5	■■■□□ 2.79
UGP2-223	ENST00000493222	DAPK1	P53355	1430 aa		32.47	■■■□□ 2.79
UGP2-223	ENST00000493222	PKD2	Q13563	968 aa		32.47	■■■□□ 2.79
UGP2-223	ENST00000493222	KIF15	Q9NS87	1388 aa		32.46	■■■□□ 2.79
UGP2-223	ENST00000493222	PRDM15	P57071	1507 aa	Predicted RBP	32.44	■■■□□ 2.78
UGP2-223	ENST00000493222	NLRP1	Q9C000	1473 aa		32.43	■■■□□ 2.78
UGP2-223	ENST00000493222	ERBIN	Q96RT1	1412 aa		32.43	■■■□□ 2.78
UGP2-223	ENST00000493222	SPATA31D1	Q6ZQQ2	1576 aa		32.42	■■■□□ 2.78
UGP2-223	ENST00000493222	IQSEC2	Q5JU85	1478 aa		32.4	■■■□□ 2.78
UGP2-223	ENST00000493222	NEURL4	Q96JN8	1562 aa		32.4	■■■□□ 2.78
UGP2-223	ENST00000493222	DEPDC5	O75140	1603 aa		32.4	■■■□□ 2.78
UGP2-223	ENST00000493222	UGGT1	Q9NYU2	1555 aa		32.39	■■■□□ 2.78
UGP2-223	ENST00000493222	CFAP65	Q6ZU64	1925 aa	Known RBP	32.38	■■■□□ 2.77
UGP2-223	ENST00000493222	ERVK-7	P63135	1459 aa		32.37	■■■□□ 2.77
UGP2-223	ENST00000493222	RRP7BP	Q9NSQ0	103 aa		32.36	■■■□□ 2.77
UGP2-223	ENST00000493222	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.35	■■■□□ 2.77
UGP2-223	ENST00000493222	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.31	■■■□□ 2.76	7e-7	■■□□□ 12.8
UGP2-223	ENST00000493222	ANKRD30A	Q9BXX3	1397 aa		32.3	■■■□□ 2.76
UGP2-223	ENST00000493222	UBR1	Q8IWV7	1749 aa		32.27	■■■□□ 2.76
UGP2-223	ENST00000493222	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.26	■■■□□ 2.75
UGP2-223	ENST00000493222	CHIC2	Q9UKJ5	165 aa		32.26	■■■□□ 2.75
UGP2-223	ENST00000493222	ADGRL2	O95490	1459 aa		32.25	■■■□□ 2.75
UGP2-223	ENST00000493222	ARHGAP31	Q2M1Z3	1444 aa		32.24	■■■□□ 2.75
UGP2-223	ENST00000493222	IQGAP1	P46940	1657 aa		32.24	■■■□□ 2.75
UGP2-223	ENST00000493222	ANKLE2	Q86XL3	938 aa		32.22	■■■□□ 2.75
UGP2-223	ENST00000493222	KANK1	Q14678	1352 aa		32.21	■■■□□ 2.75
UGP2-223	ENST00000493222	FAM50A	Q14320	339 aa	Known RBP	32.21	■■■□□ 2.75
UGP2-223	ENST00000493222	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.21	■■■□□ 2.75
UGP2-223	ENST00000493222	VWDE	Q8N2E2	1590 aa		32.2	■■■□□ 2.75
UGP2-223	ENST00000493222	MED14	O60244	1454 aa		32.2	■■■□□ 2.75
UGP2-223	ENST00000493222	NPHP4	O75161	1426 aa	Predicted RBP	32.18	■■■□□ 2.74
UGP2-223	ENST00000493222	LMTK2	Q8IWU2	1503 aa		32.18	■■■□□ 2.74
UGP2-223	ENST00000493222	CPS1	P31327	1500 aa		32.16	■■■□□ 2.74
UGP2-223	ENST00000493222	PIK3C2B	O00750	1634 aa		32.15	■■■□□ 2.74
UGP2-223	ENST00000493222	EFCAB6	Q5THR3	1501 aa		32.13	■■■□□ 2.73
UGP2-223	ENST00000493222	SLIT1	O75093	1534 aa		32.08	■■■□□ 2.73
UGP2-223	ENST00000493222	KDM5A	P29375	1690 aa	Known RBP	32.08	■■■□□ 2.73
UGP2-223	ENST00000493222	ANKRD50	Q9ULJ7	1429 aa		32.08	■■■□□ 2.73
UGP2-223	ENST00000493222	SCAF11	Q99590	1463 aa	Known RBP	32.07	■■■□□ 2.72
UGP2-223	ENST00000493222	SYNM	O15061	1565 aa		32.07	■■■□□ 2.72
UGP2-223	ENST00000493222	ARHGAP23	Q9P227	1491 aa		32.06	■■■□□ 2.72
UGP2-223	ENST00000493222	UBAP1L	F5GYI3	381 aa		32.06	■■■□□ 2.72
UGP2-223	ENST00000493222	STRCP1	A6NGW2	1772 aa		32.04	■■■□□ 2.72
UGP2-223	ENST00000493222	UNC13B	O14795	1591 aa		32.02	■■■□□ 2.72
UGP2-223	ENST00000493222	TET3	O43151	1660 aa		32.02	■■■□□ 2.72
UGP2-223	ENST00000493222	GCC2	Q8IWJ2	1684 aa		32	■■■□□ 2.71
UGP2-223	ENST00000493222	NOS1	P29475	1434 aa		31.98	■■■□□ 2.71
UGP2-223	ENST00000493222	ADGRB3	O60242	1522 aa		31.96	■■■□□ 2.71
UGP2-223	ENST00000493222	RPRD2	Q5VT52	1461 aa	Known RBP	31.96	■■■□□ 2.71
UGP2-223	ENST00000493222	STAG3	Q9UJ98	1225 aa		31.94	■■■□□ 2.7
UGP2-223	ENST00000493222	ROCK1	Q13464	1354 aa		31.94	■■■□□ 2.7
UGP2-223	ENST00000493222	TMEM2	Q9UHN6	1383 aa		31.94	■■■□□ 2.7
UGP2-223	ENST00000493222	LTK	P29376	864 aa		31.93	■■■□□ 2.7
UGP2-223	ENST00000493222	TXNDC2	Q86VQ3	553 aa		31.92	■■■□□ 2.7
UGP2-223	ENST00000493222	EID1	Q9Y6B2	187 aa		31.91	■■■□□ 2.7
UGP2-223	ENST00000493222	IDI1	Q13907	227 aa		31.9	■■■□□ 2.7
UGP2-223	ENST00000493222	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.9	■■■□□ 2.7
UGP2-223	ENST00000493222	MYO5B	Q9ULV0	1848 aa		31.89	■■■□□ 2.7
UGP2-223	ENST00000493222	LRRC7	Q96NW7	1537 aa		31.89	■■■□□ 2.7
UGP2-223	ENST00000493222	IQGAP3	Q86VI3	1631 aa		31.89	■■■□□ 2.7
UGP2-223	ENST00000493222	DISP3	Q9P2K9	1392 aa		31.88	■■■□□ 2.69
UGP2-223	ENST00000493222		E9PCH4	1651 aa		31.88	■■■□□ 2.69
UGP2-223	ENST00000493222	SCAF1	Q9H7N4	1312 aa	Known RBP	31.86	■■■□□ 2.69
UGP2-223	ENST00000493222	TOM1	O60784	492 aa		31.85	■■■□□ 2.69
UGP2-223	ENST00000493222	ALK	Q9UM73	1620 aa		31.85	■■■□□ 2.69
UGP2-223	ENST00000493222	ITGAE	P38570	1179 aa		31.83	■■■□□ 2.69
UGP2-223	ENST00000493222	PIP4K2B	P78356	416 aa		31.82	■■■□□ 2.68
UGP2-223	ENST00000493222	SLC52A1	Q9NWF4	448 aa		31.82	■■■□□ 2.68
UGP2-223	ENST00000493222	XIRP1	Q702N8	1843 aa	Known RBP	31.82	■■■□□ 2.68
UGP2-223	ENST00000493222	TMEM131L	A2VDJ0	1609 aa		31.78	■■■□□ 2.68
UGP2-223	ENST00000493222	HSPA1L	P34931	641 aa		31.71	■■■□□ 2.67
UGP2-223	ENST00000493222	ZFYVE9	O95405	1425 aa		31.71	■■■□□ 2.67
UGP2-223	ENST00000493222	RRBP1	Q9P2E9	1410 aa	Known RBP	31.71	■■■□□ 2.67
UGP2-223	ENST00000493222	NUP155	O75694	1391 aa		31.7	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms