RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 DHX29Q7Z478 1369 aaKnown RBP17.78■□□□□ 0.44
SND1-215ENST00000492772 CCDC141Q6ZP82 1450 aa17.77■□□□□ 0.44
SND1-215ENST00000492772 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
SND1-215ENST00000492772 PZPP20742 1482 aa17.75■□□□□ 0.43
SND1-215ENST00000492772 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
SND1-215ENST00000492772 CAMSAP2Q08AD1 1489 aa17.75■□□□□ 0.43
SND1-215ENST00000492772 CPS1P31327 1500 aa17.74■□□□□ 0.43
SND1-215ENST00000492772 TNRQ92752 1358 aa17.74■□□□□ 0.43
SND1-215ENST00000492772 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
SND1-215ENST00000492772 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
SND1-215ENST00000492772 NLRP1Q9C000 1473 aa17.69■□□□□ 0.42
SND1-215ENST00000492772 KIF3BO15066 747 aa17.69■□□□□ 0.42
SND1-215ENST00000492772 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
SND1-215ENST00000492772 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
SND1-215ENST00000492772 DEPDC5O75140 1603 aa17.69■□□□□ 0.42
SND1-215ENST00000492772 ZC3H13Q5T200 1668 aaKnown RBP17.68■□□□□ 0.42
SND1-215ENST00000492772 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
SND1-215ENST00000492772 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
SND1-215ENST00000492772 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
SND1-215ENST00000492772 VWDEQ8N2E2 1590 aa17.66■□□□□ 0.42
SND1-215ENST00000492772 MIA2Q96PC5 1412 aa17.65■□□□□ 0.42
SND1-215ENST00000492772 FBXO31Q5XUX0 539 aaPredicted RBP17.65■□□□□ 0.42
SND1-215ENST00000492772 MED14O60244 1454 aa17.64■□□□□ 0.41
SND1-215ENST00000492772 MED1Q15648 1581 aaPredicted RBP17.64■□□□□ 0.41
SND1-215ENST00000492772 MAST1Q9Y2H9 1570 aa17.64■□□□□ 0.41
SND1-215ENST00000492772 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
SND1-215ENST00000492772 IQGAP1P46940 1657 aa17.64■□□□□ 0.41
SND1-215ENST00000492772 TOM1O60784 492 aa17.63■□□□□ 0.41
SND1-215ENST00000492772 ANKLE2Q86XL3 938 aa17.63■□□□□ 0.41
SND1-215ENST00000492772 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
SND1-215ENST00000492772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
SND1-215ENST00000492772 NPHP4O75161 1426 aaPredicted RBP17.63■□□□□ 0.41
SND1-215ENST00000492772 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
SND1-215ENST00000492772 ABCC3O15438 1527 aa17.62■□□□□ 0.41
SND1-215ENST00000492772 SYNMO15061 1565 aa17.61■□□□□ 0.41
SND1-215ENST00000492772 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
SND1-215ENST00000492772 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
SND1-215ENST00000492772 HSPA1LP34931 641 aa17.59■□□□□ 0.41
SND1-215ENST00000492772 PIP4K2BP78356 416 aa17.59■□□□□ 0.41
SND1-215ENST00000492772 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
SND1-215ENST00000492772 MROH1Q8NDA8 1641 aa17.57■□□□□ 0.4
SND1-215ENST00000492772 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
SND1-215ENST00000492772 ALKQ9UM73 1620 aa17.56■□□□□ 0.4
SND1-215ENST00000492772 CEP152O94986 1710 aa17.55■□□□□ 0.4
SND1-215ENST00000492772 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
SND1-215ENST00000492772 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
SND1-215ENST00000492772 STRCP1A6NGW2 1772 aa17.54■□□□□ 0.4
SND1-215ENST00000492772 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.4
SND1-215ENST00000492772 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
SND1-215ENST00000492772 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
SND1-215ENST00000492772 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
SND1-215ENST00000492772 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
SND1-215ENST00000492772 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
SND1-215ENST00000492772 CROCC2H7BZ55 1655 aa17.49■□□□□ 0.39
SND1-215ENST00000492772 SLIT1O75093 1534 aa17.47■□□□□ 0.39
SND1-215ENST00000492772 ARHGAP23Q9P227 1491 aa17.46■□□□□ 0.39
SND1-215ENST00000492772 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
SND1-215ENST00000492772 ARHGAP31Q2M1Z3 1444 aa17.46■□□□□ 0.39
SND1-215ENST00000492772 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
SND1-215ENST00000492772 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
SND1-215ENST00000492772 KIF15Q9NS87 1388 aa17.43■□□□□ 0.38
SND1-215ENST00000492772 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
SND1-215ENST00000492772 PIK3C2BO00750 1634 aa17.42■□□□□ 0.38
SND1-215ENST00000492772 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
SND1-215ENST00000492772 PTPN23Q9H3S7 1636 aa17.4■□□□□ 0.38
SND1-215ENST00000492772 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
SND1-215ENST00000492772 EID1Q9Y6B2 187 aa17.38■□□□□ 0.37
SND1-215ENST00000492772 ABCC5O15440 1437 aa17.38■□□□□ 0.37
SND1-215ENST00000492772 LTKP29376 864 aa17.37■□□□□ 0.37
SND1-215ENST00000492772 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
SND1-215ENST00000492772 KANK1Q14678 1352 aa17.37■□□□□ 0.37
SND1-215ENST00000492772 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
SND1-215ENST00000492772 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
SND1-215ENST00000492772 TMEM2Q9UHN6 1383 aa17.36■□□□□ 0.37
SND1-215ENST00000492772 DAPK1P53355 1430 aa17.36■□□□□ 0.37
SND1-215ENST00000492772 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
SND1-215ENST00000492772 RRP7BPQ9NSQ0 103 aa17.32■□□□□ 0.36
SND1-215ENST00000492772 ADGRB3O60242 1522 aa17.31■□□□□ 0.36
SND1-215ENST00000492772 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
SND1-215ENST00000492772 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
SND1-215ENST00000492772 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
SND1-215ENST00000492772 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
SND1-215ENST00000492772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.365e-8■□□□□ 8.5
SND1-215ENST00000492772 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
SND1-215ENST00000492772 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
SND1-215ENST00000492772 TET3O43151 1660 aa17.29■□□□□ 0.36
SND1-215ENST00000492772 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
SND1-215ENST00000492772 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
SND1-215ENST00000492772 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
SND1-215ENST00000492772 NOS1P29475 1434 aa17.28■□□□□ 0.36
SND1-215ENST00000492772 APLP2Q06481 763 aa17.27■□□□□ 0.36
SND1-215ENST00000492772 KCNA6P17658 529 aa17.26■□□□□ 0.35
SND1-215ENST00000492772 ADGRL2O95490 1459 aa17.25■□□□□ 0.35
SND1-215ENST00000492772 IDI1Q13907 227 aa17.25■□□□□ 0.35
SND1-215ENST00000492772 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
SND1-215ENST00000492772 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
SND1-215ENST00000492772 GCC2Q8IWJ2 1684 aa17.21■□□□□ 0.35
SND1-215ENST00000492772 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
SND1-215ENST00000492772 SLC26A8Q96RN1 970 aa17.21■□□□□ 0.35
SND1-215ENST00000492772 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms