RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PTPRTO14522 1441 aa12.89□□□□□ -0.35
LSM2-213ENST00000491421 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
LSM2-213ENST00000491421 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
LSM2-213ENST00000491421 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
LSM2-213ENST00000491421 PZPP20742 1482 aa12.88□□□□□ -0.35
LSM2-213ENST00000491421 CEP170BQ9Y4F5 1589 aaPredicted RBP12.87□□□□□ -0.35
LSM2-213ENST00000491421 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
LSM2-213ENST00000491421 TNRQ92752 1358 aa12.87□□□□□ -0.35
LSM2-213ENST00000491421 FBXO31Q5XUX0 539 aaPredicted RBP12.87□□□□□ -0.35
LSM2-213ENST00000491421 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
LSM2-213ENST00000491421 ABCC5O15440 1437 aa12.87□□□□□ -0.35
LSM2-213ENST00000491421 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
LSM2-213ENST00000491421 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
LSM2-213ENST00000491421 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
LSM2-213ENST00000491421 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
LSM2-213ENST00000491421 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
LSM2-213ENST00000491421 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
LSM2-213ENST00000491421 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
LSM2-213ENST00000491421 DAPK1P53355 1430 aa12.85□□□□□ -0.35
LSM2-213ENST00000491421 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
LSM2-213ENST00000491421 EIF2AK4Q9P2K8 1649 aaKnown RBP12.84□□□□□ -0.35
LSM2-213ENST00000491421 PKD2Q13563 968 aa12.84□□□□□ -0.35
LSM2-213ENST00000491421 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
LSM2-213ENST00000491421 ABCC3O15438 1527 aa12.83□□□□□ -0.35
LSM2-213ENST00000491421 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
LSM2-213ENST00000491421 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
LSM2-213ENST00000491421 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
LSM2-213ENST00000491421 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
LSM2-213ENST00000491421 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
LSM2-213ENST00000491421 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
LSM2-213ENST00000491421 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
LSM2-213ENST00000491421 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
LSM2-213ENST00000491421 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
LSM2-213ENST00000491421 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
LSM2-213ENST00000491421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
LSM2-213ENST00000491421 ZNF335Q9H4Z2 1342 aaPredicted RBP12.78□□□□□ -0.36
LSM2-213ENST00000491421 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
LSM2-213ENST00000491421 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
LSM2-213ENST00000491421 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.37
LSM2-213ENST00000491421 KANK1Q14678 1352 aa12.77□□□□□ -0.37
LSM2-213ENST00000491421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.77□□□□□ -0.37
LSM2-213ENST00000491421 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
LSM2-213ENST00000491421 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
LSM2-213ENST00000491421 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
LSM2-213ENST00000491421 ARHGAP31Q2M1Z3 1444 aa12.75□□□□□ -0.37
LSM2-213ENST00000491421 ANKLE2Q86XL3 938 aa12.75□□□□□ -0.37
LSM2-213ENST00000491421 CEP152O94986 1710 aa12.74□□□□□ -0.37
LSM2-213ENST00000491421 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
LSM2-213ENST00000491421 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
LSM2-213ENST00000491421 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
LSM2-213ENST00000491421 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.38
LSM2-213ENST00000491421 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.38
LSM2-213ENST00000491421 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.38
LSM2-213ENST00000491421 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
LSM2-213ENST00000491421 LMTK2Q8IWU2 1503 aa12.7□□□□□ -0.38
LSM2-213ENST00000491421 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
LSM2-213ENST00000491421 MED14O60244 1454 aa12.69□□□□□ -0.38
LSM2-213ENST00000491421 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
LSM2-213ENST00000491421 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
LSM2-213ENST00000491421 UBAP1LF5GYI3 381 aa12.66□□□□□ -0.38
LSM2-213ENST00000491421 ITGAEP38570 1179 aa12.66□□□□□ -0.38
LSM2-213ENST00000491421 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
LSM2-213ENST00000491421 CPS1P31327 1500 aa12.66□□□□□ -0.38
LSM2-213ENST00000491421 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
LSM2-213ENST00000491421 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
LSM2-213ENST00000491421 ARHGAP23Q9P227 1491 aa12.65□□□□□ -0.38
LSM2-213ENST00000491421 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 NOS1P29475 1434 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 SLIT1O75093 1534 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 IDI1Q13907 227 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 TXNDC2Q86VQ3 553 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
LSM2-213ENST00000491421 LTKP29376 864 aa12.63□□□□□ -0.39
LSM2-213ENST00000491421 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
LSM2-213ENST00000491421 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
LSM2-213ENST00000491421 RPRD2Q5VT52 1461 aaKnown RBP12.63□□□□□ -0.39
LSM2-213ENST00000491421 SYNMO15061 1565 aa12.63□□□□□ -0.39
LSM2-213ENST00000491421 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
LSM2-213ENST00000491421 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
LSM2-213ENST00000491421 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
LSM2-213ENST00000491421 UNC13BO14795 1591 aa12.6□□□□□ -0.39
LSM2-213ENST00000491421 ADGRB3O60242 1522 aa12.59□□□□□ -0.39
LSM2-213ENST00000491421 TET3O43151 1660 aa12.59□□□□□ -0.39
LSM2-213ENST00000491421 TOM1O60784 492 aa12.59□□□□□ -0.39
LSM2-213ENST00000491421 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
LSM2-213ENST00000491421 NUP155O75694 1391 aa12.58□□□□□ -0.4
LSM2-213ENST00000491421 KDM5AP29375 1690 aaKnown RBP12.58□□□□□ -0.4
LSM2-213ENST00000491421 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
LSM2-213ENST00000491421 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
LSM2-213ENST00000491421 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
LSM2-213ENST00000491421 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
LSM2-213ENST00000491421 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
LSM2-213ENST00000491421 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
LSM2-213ENST00000491421 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
LSM2-213ENST00000491421 BCANQ96GW7 911 aa12.54□□□□□ -0.4
LSM2-213ENST00000491421 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
LSM2-213ENST00000491421 SLC26A8Q96RN1 970 aa12.53□□□□□ -0.4
LSM2-213ENST00000491421 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
LSM2-213ENST00000491421 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
LSM2-213ENST00000491421 E9PCH4 1651 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms