RNA–Protein interactions for RNA: ENST00000488484.1

RANBP1-214, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-214ENST00000488484 POLR1AO95602 1720 aaPredicted RBP23.78■■□□□ 1.4
RANBP1-214ENST00000488484 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
RANBP1-214ENST00000488484 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
RANBP1-214ENST00000488484 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
RANBP1-214ENST00000488484 MED1Q15648 1581 aaPredicted RBP23.73■■□□□ 1.39
RANBP1-214ENST00000488484 ZNF644Q9H582 1327 aaPredicted RBP23.72■■□□□ 1.39
RANBP1-214ENST00000488484 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
RANBP1-214ENST00000488484 CPS1P31327 1500 aa23.72■■□□□ 1.39
RANBP1-214ENST00000488484 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
RANBP1-214ENST00000488484 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
RANBP1-214ENST00000488484 TNRQ92752 1358 aa23.69■■□□□ 1.38
RANBP1-214ENST00000488484 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
RANBP1-214ENST00000488484 HSPA1LP34931 641 aa23.68■■□□□ 1.38
RANBP1-214ENST00000488484 PIP4K2BP78356 416 aa23.68■■□□□ 1.38
RANBP1-214ENST00000488484 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
RANBP1-214ENST00000488484 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
RANBP1-214ENST00000488484 FAM135AQ9P2D6 1515 aa23.67■■□□□ 1.38
RANBP1-214ENST00000488484 PZPP20742 1482 aa23.67■■□□□ 1.38
RANBP1-214ENST00000488484 TOM1O60784 492 aa23.65■■□□□ 1.38
RANBP1-214ENST00000488484 FBXO31Q5XUX0 539 aaPredicted RBP23.65■■□□□ 1.38
RANBP1-214ENST00000488484 KIF3BO15066 747 aa23.63■■□□□ 1.37
RANBP1-214ENST00000488484 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
RANBP1-214ENST00000488484 VWDEQ8N2E2 1590 aa23.62■■□□□ 1.37
RANBP1-214ENST00000488484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.374e-9■■■■□ 24.6
RANBP1-214ENST00000488484 ANKLE2Q86XL3 938 aa23.59■■□□□ 1.37
RANBP1-214ENST00000488484 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
RANBP1-214ENST00000488484 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
RANBP1-214ENST00000488484 MYOM3Q5VTT5 1437 aa23.59■■□□□ 1.37
RANBP1-214ENST00000488484 MIA2Q96PC5 1412 aa23.59■■□□□ 1.37
RANBP1-214ENST00000488484 UGGT1Q9NYU2 1555 aa23.58■■□□□ 1.37
RANBP1-214ENST00000488484 CAMSAP2Q08AD1 1489 aa23.58■■□□□ 1.37
RANBP1-214ENST00000488484 RSPH4AQ5TD94 716 aa23.58■■□□□ 1.37
RANBP1-214ENST00000488484 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.36
RANBP1-214ENST00000488484 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
RANBP1-214ENST00000488484 MED14O60244 1454 aa23.56■■□□□ 1.36
RANBP1-214ENST00000488484 ALKQ9UM73 1620 aa23.55■■□□□ 1.36
RANBP1-214ENST00000488484 IQGAP1P46940 1657 aa23.55■■□□□ 1.36
RANBP1-214ENST00000488484 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
RANBP1-214ENST00000488484 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
RANBP1-214ENST00000488484 ARHGEF5Q12774 1597 aa23.5■■□□□ 1.35
RANBP1-214ENST00000488484 STRCP1A6NGW2 1772 aa23.49■■□□□ 1.35
RANBP1-214ENST00000488484 SYNMO15061 1565 aa23.48■■□□□ 1.35
RANBP1-214ENST00000488484 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
RANBP1-214ENST00000488484 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
RANBP1-214ENST00000488484 ABCC3O15438 1527 aa23.45■■□□□ 1.34
RANBP1-214ENST00000488484 LRRC7Q96NW7 1537 aa23.45■■□□□ 1.34
RANBP1-214ENST00000488484 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
RANBP1-214ENST00000488484 TSPY4P0CV99 314 aa23.45■■□□□ 1.34
RANBP1-214ENST00000488484 TSPY10P0CW01 314 aa23.45■■□□□ 1.34
RANBP1-214ENST00000488484 SENP3Q9H4L4 574 aaPredicted RBP23.43■■□□□ 1.34
RANBP1-214ENST00000488484 ERVK-7P63135 1459 aa23.42■■□□□ 1.34
RANBP1-214ENST00000488484 PTPN23Q9H3S7 1636 aa23.41■■□□□ 1.34
RANBP1-214ENST00000488484 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
RANBP1-214ENST00000488484 MAST1Q9Y2H9 1570 aa23.4■■□□□ 1.34
RANBP1-214ENST00000488484 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.33
RANBP1-214ENST00000488484 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
RANBP1-214ENST00000488484 CEP152O94986 1710 aa23.38■■□□□ 1.33
RANBP1-214ENST00000488484 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
RANBP1-214ENST00000488484 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
RANBP1-214ENST00000488484 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.33
RANBP1-214ENST00000488484 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
RANBP1-214ENST00000488484 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
RANBP1-214ENST00000488484 SLIT1O75093 1534 aa23.29■■□□□ 1.32
RANBP1-214ENST00000488484 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
RANBP1-214ENST00000488484 ABCC5O15440 1437 aa23.28■■□□□ 1.32
RANBP1-214ENST00000488484 DAPK1P53355 1430 aa23.27■■□□□ 1.32
RANBP1-214ENST00000488484 DUOX2Q9NRD8 1548 aa23.27■■□□□ 1.32
RANBP1-214ENST00000488484 PRDM15P57071 1507 aaPredicted RBP23.25■■□□□ 1.31
RANBP1-214ENST00000488484 LTKP29376 864 aa23.25■■□□□ 1.31
RANBP1-214ENST00000488484 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
RANBP1-214ENST00000488484 RGS17Q9UGC6 210 aaPredicted RBP23.23■■□□□ 1.31
RANBP1-214ENST00000488484 ARHGAP31Q2M1Z3 1444 aa23.22■■□□□ 1.31
RANBP1-214ENST00000488484 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
RANBP1-214ENST00000488484 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
RANBP1-214ENST00000488484 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
RANBP1-214ENST00000488484 EID1Q9Y6B2 187 aa23.2■■□□□ 1.3
RANBP1-214ENST00000488484 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
RANBP1-214ENST00000488484 KIF15Q9NS87 1388 aa23.18■■□□□ 1.3
RANBP1-214ENST00000488484 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
RANBP1-214ENST00000488484 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
RANBP1-214ENST00000488484 TMEM2Q9UHN6 1383 aa23.16■■□□□ 1.3
RANBP1-214ENST00000488484 RRP7BPQ9NSQ0 103 aa23.15■■□□□ 1.3
RANBP1-214ENST00000488484 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
RANBP1-214ENST00000488484 TMEM94Q12767 1356 aa23.14■■□□□ 1.3
RANBP1-214ENST00000488484 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
RANBP1-214ENST00000488484 ROBO1Q9Y6N7 1651 aa23.14■■□□□ 1.29
RANBP1-214ENST00000488484 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
RANBP1-214ENST00000488484 STAG3Q9UJ98 1225 aa23.13■■□□□ 1.29
RANBP1-214ENST00000488484 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
RANBP1-214ENST00000488484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.11■■□□□ 1.296e-9■■■■□ 19.9
RANBP1-214ENST00000488484 ROCK1Q13464 1354 aa23.1■■□□□ 1.29
RANBP1-214ENST00000488484 POTEAQ6S8J7 498 aa23.09■■□□□ 1.29
RANBP1-214ENST00000488484 KANK1Q14678 1352 aa23.09■■□□□ 1.29
RANBP1-214ENST00000488484 ITGAEP38570 1179 aa23.08■■□□□ 1.29
RANBP1-214ENST00000488484 TET3O43151 1660 aa23.07■■□□□ 1.28
RANBP1-214ENST00000488484 KCNA6P17658 529 aa23.07■■□□□ 1.28
RANBP1-214ENST00000488484 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
RANBP1-214ENST00000488484 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
RANBP1-214ENST00000488484 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
RANBP1-214ENST00000488484 ADGRB3O60242 1522 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms