RNA–Protein interactions for RNA: ENST00000488484.1

RANBP1-214, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-214ENST00000488484 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
RANBP1-214ENST00000488484 ABCC9O60706 1549 aa34.09■■■■□ 3.05
RANBP1-214ENST00000488484 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
RANBP1-214ENST00000488484 DNAJC5BQ9UF47 199 aa32.3■■■□□ 2.76
RANBP1-214ENST00000488484 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
RANBP1-214ENST00000488484 NACADO15069 1562 aa31.93■■■□□ 2.7
RANBP1-214ENST00000488484 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
RANBP1-214ENST00000488484 DCAF8L2P0C7V8 631 aa31.61■■■□□ 2.65
RANBP1-214ENST00000488484 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
RANBP1-214ENST00000488484 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
RANBP1-214ENST00000488484 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
RANBP1-214ENST00000488484 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
RANBP1-214ENST00000488484 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
RANBP1-214ENST00000488484 CC2D2AQ9P2K1 1620 aa30.79■■■□□ 2.52
RANBP1-214ENST00000488484 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
RANBP1-214ENST00000488484 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
RANBP1-214ENST00000488484 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
RANBP1-214ENST00000488484 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
RANBP1-214ENST00000488484 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
RANBP1-214ENST00000488484 CUX2O14529 1486 aa29.57■■■□□ 2.32
RANBP1-214ENST00000488484 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
RANBP1-214ENST00000488484 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
RANBP1-214ENST00000488484 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
RANBP1-214ENST00000488484 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
RANBP1-214ENST00000488484 SMARCA2P51531 1590 aa29.24■■■□□ 2.27
RANBP1-214ENST00000488484 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
RANBP1-214ENST00000488484 NESP48681 1621 aa29.16■■■□□ 2.26
RANBP1-214ENST00000488484 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
RANBP1-214ENST00000488484 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
RANBP1-214ENST00000488484 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
RANBP1-214ENST00000488484 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
RANBP1-214ENST00000488484 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
RANBP1-214ENST00000488484 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
RANBP1-214ENST00000488484 MROH2BQ7Z745 1585 aa28.74■■■□□ 2.19
RANBP1-214ENST00000488484 PDS5BQ9NTI5 1447 aa28.72■■■□□ 2.19
RANBP1-214ENST00000488484 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
RANBP1-214ENST00000488484 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
RANBP1-214ENST00000488484 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
RANBP1-214ENST00000488484 WDR62O43379 1518 aa28.48■■■□□ 2.15
RANBP1-214ENST00000488484 WIZO95785 1651 aa28.38■■■□□ 2.13
RANBP1-214ENST00000488484 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
RANBP1-214ENST00000488484 FANCD2Q9BXW9 1451 aa28.24■■■□□ 2.11
RANBP1-214ENST00000488484 CFTRP13569 1480 aa28.13■■■□□ 2.09
RANBP1-214ENST00000488484 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
RANBP1-214ENST00000488484 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
RANBP1-214ENST00000488484 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
RANBP1-214ENST00000488484 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
RANBP1-214ENST00000488484 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
RANBP1-214ENST00000488484 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
RANBP1-214ENST00000488484 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
RANBP1-214ENST00000488484 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
RANBP1-214ENST00000488484 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
RANBP1-214ENST00000488484 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
RANBP1-214ENST00000488484 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
RANBP1-214ENST00000488484 TOPBP1Q92547 1522 aa27.67■■■□□ 2.02
RANBP1-214ENST00000488484 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
RANBP1-214ENST00000488484 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
RANBP1-214ENST00000488484 ABCC8Q09428 1581 aa27.56■■■□□ 2
RANBP1-214ENST00000488484 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
RANBP1-214ENST00000488484 CHD1O14646 1710 aa27.52■■■□□ 2
RANBP1-214ENST00000488484 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
RANBP1-214ENST00000488484 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
RANBP1-214ENST00000488484 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.984e-10■■■■■ 28.7
RANBP1-214ENST00000488484 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
RANBP1-214ENST00000488484 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
RANBP1-214ENST00000488484 FBLN2P98095 1184 aa27.34■■□□□ 1.97
RANBP1-214ENST00000488484 TRHP20396 242 aaPredicted RBP27.32■■□□□ 1.96
RANBP1-214ENST00000488484 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
RANBP1-214ENST00000488484 RAD54L2Q9Y4B4 1467 aa27.25■■□□□ 1.95
RANBP1-214ENST00000488484 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
RANBP1-214ENST00000488484 SOGA1O94964 1423 aa27.19■■□□□ 1.94
RANBP1-214ENST00000488484 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
RANBP1-214ENST00000488484 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
RANBP1-214ENST00000488484 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
RANBP1-214ENST00000488484 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
RANBP1-214ENST00000488484 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
RANBP1-214ENST00000488484 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
RANBP1-214ENST00000488484 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
RANBP1-214ENST00000488484 CUX1P39880 1505 aa27.03■■□□□ 1.92
RANBP1-214ENST00000488484 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
RANBP1-214ENST00000488484 SYNJ2O15056 1496 aa27■■□□□ 1.91
RANBP1-214ENST00000488484 PBRM1Q86U86 1689 aa26.95■■□□□ 1.91
RANBP1-214ENST00000488484 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
RANBP1-214ENST00000488484 AEBP2Q6ZN18 517 aaPredicted RBP26.85■■□□□ 1.89
RANBP1-214ENST00000488484 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
RANBP1-214ENST00000488484 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
RANBP1-214ENST00000488484 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
RANBP1-214ENST00000488484 GRIN2AQ12879 1464 aa26.69■■□□□ 1.86
RANBP1-214ENST00000488484 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
RANBP1-214ENST00000488484 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
RANBP1-214ENST00000488484 NUP160Q12769 1436 aa26.61■■□□□ 1.85
RANBP1-214ENST00000488484 WRNQ14191 1432 aaPredicted RBP eCLIP26.58■■□□□ 1.851e-9■□□□□ 8.8
RANBP1-214ENST00000488484 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
RANBP1-214ENST00000488484 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
RANBP1-214ENST00000488484 FHAD1B1AJZ9 1412 aa26.51■■□□□ 1.83
RANBP1-214ENST00000488484 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
RANBP1-214ENST00000488484 KIF13AQ9H1H9 1805 aa26.46■■□□□ 1.83
RANBP1-214ENST00000488484 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
RANBP1-214ENST00000488484 PRG4Q92954 1404 aaPredicted RBP26.38■■□□□ 1.81
RANBP1-214ENST00000488484 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms