RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
TM2D1-209ENST00000488410 CEP170BQ9Y4F5 1589 aaPredicted RBP15.38■□□□□ 0.05
TM2D1-209ENST00000488410 UBAP1LF5GYI3 381 aa15.38■□□□□ 0.05
TM2D1-209ENST00000488410 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
TM2D1-209ENST00000488410 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
TM2D1-209ENST00000488410 CFAP65Q6ZU64 1925 aaKnown RBP15.37■□□□□ 0.05
TM2D1-209ENST00000488410 TNRQ92752 1358 aa15.36■□□□□ 0.05
TM2D1-209ENST00000488410 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
TM2D1-209ENST00000488410 KCNA4P22459 653 aa15.36■□□□□ 0.05
TM2D1-209ENST00000488410 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
TM2D1-209ENST00000488410 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
TM2D1-209ENST00000488410 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
TM2D1-209ENST00000488410 LTBP4Q8N2S1 1624 aa15.35■□□□□ 0.05
TM2D1-209ENST00000488410 ZNF142P52746 1687 aaPredicted RBP15.35■□□□□ 0.05
TM2D1-209ENST00000488410 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
TM2D1-209ENST00000488410 A2ML1A8K2U0 1454 aa15.34■□□□□ 0.05
TM2D1-209ENST00000488410 PLA2R1Q13018 1463 aa15.33■□□□□ 0.05
TM2D1-209ENST00000488410 ARHGEF5Q12774 1597 aa15.33■□□□□ 0.05
TM2D1-209ENST00000488410 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
TM2D1-209ENST00000488410 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
TM2D1-209ENST00000488410 DNMT1P26358 1616 aaKnown RBP15.32■□□□□ 0.04
TM2D1-209ENST00000488410 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
TM2D1-209ENST00000488410 PZPP20742 1482 aa15.3■□□□□ 0.04
TM2D1-209ENST00000488410 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
TM2D1-209ENST00000488410 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
TM2D1-209ENST00000488410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.29■□□□□ 0.04
TM2D1-209ENST00000488410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
TM2D1-209ENST00000488410 POLR1AO95602 1720 aaPredicted RBP15.29■□□□□ 0.04
TM2D1-209ENST00000488410 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
TM2D1-209ENST00000488410 PIP4K2BP78356 416 aa15.28■□□□□ 0.04
TM2D1-209ENST00000488410 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
TM2D1-209ENST00000488410 MAP3K1Q13233 1512 aa15.27■□□□□ 0.04
TM2D1-209ENST00000488410 TOM1O60784 492 aa15.27■□□□□ 0.04
TM2D1-209ENST00000488410 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
TM2D1-209ENST00000488410 UGGT1Q9NYU2 1555 aa15.25■□□□□ 0.03
TM2D1-209ENST00000488410 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
TM2D1-209ENST00000488410 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
TM2D1-209ENST00000488410 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
TM2D1-209ENST00000488410 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
TM2D1-209ENST00000488410 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
TM2D1-209ENST00000488410 CEP152O94986 1710 aa15.22■□□□□ 0.03
TM2D1-209ENST00000488410 DUOX2Q9NRD8 1548 aa15.22■□□□□ 0.03
TM2D1-209ENST00000488410 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
TM2D1-209ENST00000488410 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.03
TM2D1-209ENST00000488410 EIF2AK4Q9P2K8 1649 aaKnown RBP15.21■□□□□ 0.03
TM2D1-209ENST00000488410 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
TM2D1-209ENST00000488410 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.03
TM2D1-209ENST00000488410 ABCC3O15438 1527 aa15.21■□□□□ 0.03
TM2D1-209ENST00000488410 KANK1Q14678 1352 aa15.21■□□□□ 0.02
TM2D1-209ENST00000488410 KIF15Q9NS87 1388 aa15.21■□□□□ 0.02
TM2D1-209ENST00000488410 PTPN23Q9H3S7 1636 aa15.2■□□□□ 0.02
TM2D1-209ENST00000488410 SPATA31D1Q6ZQQ2 1576 aa15.19■□□□□ 0.02
TM2D1-209ENST00000488410 CPS1P31327 1500 aa15.19■□□□□ 0.02
TM2D1-209ENST00000488410 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
TM2D1-209ENST00000488410 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
TM2D1-209ENST00000488410 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
TM2D1-209ENST00000488410 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
TM2D1-209ENST00000488410 ABCC5O15440 1437 aa15.17■□□□□ 0.02
TM2D1-209ENST00000488410 SOCS7O14512 581 aa15.17■□□□□ 0.02
TM2D1-209ENST00000488410 IQGAP1P46940 1657 aa15.16■□□□□ 0.02
TM2D1-209ENST00000488410 ERVK-7P63135 1459 aa15.16■□□□□ 0.02
TM2D1-209ENST00000488410 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
TM2D1-209ENST00000488410 HSPA1LP34931 641 aa15.16■□□□□ 0.02
TM2D1-209ENST00000488410 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
TM2D1-209ENST00000488410 BCANQ96GW7 911 aa15.15■□□□□ 0.02
TM2D1-209ENST00000488410 DAPK1P53355 1430 aa15.15■□□□□ 0.02
TM2D1-209ENST00000488410 CROCC2H7BZ55 1655 aa15.15■□□□□ 0.02
TM2D1-209ENST00000488410 ERBINQ96RT1 1412 aa15.14■□□□□ 0.01
TM2D1-209ENST00000488410 MED14O60244 1454 aa15.14■□□□□ 0.01
TM2D1-209ENST00000488410 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
TM2D1-209ENST00000488410 UBR1Q8IWV7 1749 aa15.12■□□□□ 0.01
TM2D1-209ENST00000488410 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
TM2D1-209ENST00000488410 MROH1Q8NDA8 1641 aa15.12■□□□□ 0.01
TM2D1-209ENST00000488410 VWDEQ8N2E2 1590 aa15.11■□□□□ 0.01
TM2D1-209ENST00000488410 LTKP29376 864 aa15.11■□□□□ 0.01
TM2D1-209ENST00000488410 SCAF11Q99590 1463 aaKnown RBP15.09■□□□□ 0.01
TM2D1-209ENST00000488410 IDI1Q13907 227 aa15.09■□□□□ 0.01
TM2D1-209ENST00000488410 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
TM2D1-209ENST00000488410 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
TM2D1-209ENST00000488410 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
TM2D1-209ENST00000488410 PIK3C2BO00750 1634 aa15.06■□□□□ 0
TM2D1-209ENST00000488410 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
TM2D1-209ENST00000488410 LRRC7Q96NW7 1537 aa15.05■□□□□ -0
TM2D1-209ENST00000488410 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
TM2D1-209ENST00000488410 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
TM2D1-209ENST00000488410 SLC26A8Q96RN1 970 aa15.04■□□□□ -0
TM2D1-209ENST00000488410 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
TM2D1-209ENST00000488410 PPP1R15AO75807 674 aaPredicted RBP15.03■□□□□ -0
TM2D1-209ENST00000488410 ITGAEP38570 1179 aa15.03■□□□□ -0
TM2D1-209ENST00000488410 PROSER2Q86WR7 435 aaPredicted RBP15.03■□□□□ -0
TM2D1-209ENST00000488410 SLIT1O75093 1534 aa15.02■□□□□ -0
TM2D1-209ENST00000488410 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
TM2D1-209ENST00000488410 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
TM2D1-209ENST00000488410 SYNMO15061 1565 aa15.01□□□□□ -0.01
TM2D1-209ENST00000488410 ANKRD50Q9ULJ7 1429 aa15□□□□□ -0.01
TM2D1-209ENST00000488410 KCNA6P17658 529 aa15□□□□□ -0.01
TM2D1-209ENST00000488410 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
TM2D1-209ENST00000488410 RBM33Q96EV2 1170 aaKnown RBP14.99□□□□□ -0.01
TM2D1-209ENST00000488410 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
TM2D1-209ENST00000488410 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms