RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
TM2D1-209ENST00000488410 ABCC9O60706 1549 aa21.8■■□□□ 1.08
TM2D1-209ENST00000488410 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
TM2D1-209ENST00000488410 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
TM2D1-209ENST00000488410 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
TM2D1-209ENST00000488410 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
TM2D1-209ENST00000488410 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
TM2D1-209ENST00000488410 NACADO15069 1562 aa20.54■□□□□ 0.88
TM2D1-209ENST00000488410 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
TM2D1-209ENST00000488410 PABPN1Q86U42 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
TM2D1-209ENST00000488410 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
TM2D1-209ENST00000488410 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
TM2D1-209ENST00000488410 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
TM2D1-209ENST00000488410 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
TM2D1-209ENST00000488410 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
TM2D1-209ENST00000488410 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
TM2D1-209ENST00000488410 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
TM2D1-209ENST00000488410 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
TM2D1-209ENST00000488410 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
TM2D1-209ENST00000488410 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
TM2D1-209ENST00000488410 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
TM2D1-209ENST00000488410 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
TM2D1-209ENST00000488410 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
TM2D1-209ENST00000488410 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
TM2D1-209ENST00000488410 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
TM2D1-209ENST00000488410 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
TM2D1-209ENST00000488410 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
TM2D1-209ENST00000488410 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
TM2D1-209ENST00000488410 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
TM2D1-209ENST00000488410 CUX2O14529 1486 aa18.72■□□□□ 0.59
TM2D1-209ENST00000488410 NESP48681 1621 aa18.69■□□□□ 0.58
TM2D1-209ENST00000488410 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
TM2D1-209ENST00000488410 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
TM2D1-209ENST00000488410 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
TM2D1-209ENST00000488410 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
TM2D1-209ENST00000488410 WIZO95785 1651 aa18.47■□□□□ 0.55
TM2D1-209ENST00000488410 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
TM2D1-209ENST00000488410 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
TM2D1-209ENST00000488410 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
TM2D1-209ENST00000488410 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
TM2D1-209ENST00000488410 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
TM2D1-209ENST00000488410 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
TM2D1-209ENST00000488410 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
TM2D1-209ENST00000488410 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
TM2D1-209ENST00000488410 WDR62O43379 1518 aa18.18■□□□□ 0.5
TM2D1-209ENST00000488410 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
TM2D1-209ENST00000488410 CFTRP13569 1480 aa18.14■□□□□ 0.5
TM2D1-209ENST00000488410 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
TM2D1-209ENST00000488410 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
TM2D1-209ENST00000488410 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
TM2D1-209ENST00000488410 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
TM2D1-209ENST00000488410 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
TM2D1-209ENST00000488410 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
TM2D1-209ENST00000488410 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
TM2D1-209ENST00000488410 TOPBP1Q92547 1522 aa17.83■□□□□ 0.45
TM2D1-209ENST00000488410 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
TM2D1-209ENST00000488410 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
TM2D1-209ENST00000488410 FBLN2P98095 1184 aa17.76■□□□□ 0.43
TM2D1-209ENST00000488410 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.42
TM2D1-209ENST00000488410 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
TM2D1-209ENST00000488410 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
TM2D1-209ENST00000488410 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
TM2D1-209ENST00000488410 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
TM2D1-209ENST00000488410 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
TM2D1-209ENST00000488410 SOGA1O94964 1423 aa17.65■□□□□ 0.42
TM2D1-209ENST00000488410 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
TM2D1-209ENST00000488410 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
TM2D1-209ENST00000488410 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
TM2D1-209ENST00000488410 CHD1O14646 1710 aa17.63■□□□□ 0.41
TM2D1-209ENST00000488410 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
TM2D1-209ENST00000488410 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
TM2D1-209ENST00000488410 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
TM2D1-209ENST00000488410 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
TM2D1-209ENST00000488410 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
TM2D1-209ENST00000488410 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
TM2D1-209ENST00000488410 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
TM2D1-209ENST00000488410 CUX1P39880 1505 aa17.51■□□□□ 0.39
TM2D1-209ENST00000488410 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
TM2D1-209ENST00000488410 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
TM2D1-209ENST00000488410 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
TM2D1-209ENST00000488410 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
TM2D1-209ENST00000488410 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
TM2D1-209ENST00000488410 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
TM2D1-209ENST00000488410 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
TM2D1-209ENST00000488410 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
TM2D1-209ENST00000488410 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
TM2D1-209ENST00000488410 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
TM2D1-209ENST00000488410 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
TM2D1-209ENST00000488410 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
TM2D1-209ENST00000488410 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
TM2D1-209ENST00000488410 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
TM2D1-209ENST00000488410 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
TM2D1-209ENST00000488410 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
TM2D1-209ENST00000488410 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
TM2D1-209ENST00000488410 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
TM2D1-209ENST00000488410 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
TM2D1-209ENST00000488410 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
TM2D1-209ENST00000488410 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
TM2D1-209ENST00000488410 NUP160Q12769 1436 aa17.1■□□□□ 0.33
TM2D1-209ENST00000488410 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms