RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
MCF2L-226ENST00000486210 CEP162Q5TB80 1403 aa28.06■■■□□ 2.08
MCF2L-226ENST00000486210 FBXO31Q5XUX0 539 aaPredicted RBP28.04■■■□□ 2.08
MCF2L-226ENST00000486210 KDM5DQ9BY66 1539 aa28.02■■■□□ 2.08
MCF2L-226ENST00000486210 PZPP20742 1482 aa28.02■■■□□ 2.08
MCF2L-226ENST00000486210 TNRQ92752 1358 aa28.01■■■□□ 2.07
MCF2L-226ENST00000486210 CCDC141Q6ZP82 1450 aa28■■■□□ 2.07
MCF2L-226ENST00000486210 FAM135AQ9P2D6 1515 aa27.99■■■□□ 2.07
MCF2L-226ENST00000486210 KIF3BO15066 747 aa27.99■■■□□ 2.07
MCF2L-226ENST00000486210 CPS1P31327 1500 aa27.98■■■□□ 2.07
MCF2L-226ENST00000486210 CAMSAP2Q08AD1 1489 aa27.98■■■□□ 2.07
MCF2L-226ENST00000486210 SHANK2Q9UPX8 1470 aa27.96■■■□□ 2.07
MCF2L-226ENST00000486210 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
MCF2L-226ENST00000486210 HSPA1LP34931 641 aa27.94■■■□□ 2.06
MCF2L-226ENST00000486210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.94■■■□□ 2.06
MCF2L-226ENST00000486210 NCOA2Q15596 1464 aa27.94■■■□□ 2.06
MCF2L-226ENST00000486210 MED1Q15648 1581 aaPredicted RBP27.93■■■□□ 2.06
MCF2L-226ENST00000486210 PIP4K2BP78356 416 aa27.91■■■□□ 2.06
MCF2L-226ENST00000486210 MIA2Q96PC5 1412 aa27.91■■■□□ 2.06
MCF2L-226ENST00000486210 WASHC2CQ9Y4E1 1318 aa27.91■■■□□ 2.06
MCF2L-226ENST00000486210 ALKQ9UM73 1620 aa27.9■■■□□ 2.06
MCF2L-226ENST00000486210 UGGT1Q9NYU2 1555 aa27.9■■■□□ 2.06
MCF2L-226ENST00000486210 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
MCF2L-226ENST00000486210 DEPDC5O75140 1603 aa27.89■■■□□ 2.06
MCF2L-226ENST00000486210 ARHGEF5Q12774 1597 aa27.89■■■□□ 2.05
MCF2L-226ENST00000486210 NLRP1Q9C000 1473 aa27.89■■■□□ 2.05
MCF2L-226ENST00000486210 TOM1O60784 492 aa27.88■■■□□ 2.05
MCF2L-226ENST00000486210 MED14O60244 1454 aa27.88■■■□□ 2.05
MCF2L-226ENST00000486210 RSPH4AQ5TD94 716 aa27.87■■■□□ 2.05
MCF2L-226ENST00000486210 ANKLE2Q86XL3 938 aa27.87■■■□□ 2.05
MCF2L-226ENST00000486210 NPHP4O75161 1426 aaPredicted RBP27.85■■■□□ 2.05
MCF2L-226ENST00000486210 THEMISQ8N1K5 641 aaPredicted RBP27.85■■■□□ 2.05
MCF2L-226ENST00000486210 STRCP1A6NGW2 1772 aa27.84■■■□□ 2.05
MCF2L-226ENST00000486210 RNF17Q9BXT8 1623 aaKnown RBP27.84■■■□□ 2.05
MCF2L-226ENST00000486210 IQGAP1P46940 1657 aa27.84■■■□□ 2.05
MCF2L-226ENST00000486210 ABCC3O15438 1527 aa27.8■■■□□ 2.04
MCF2L-226ENST00000486210 ZC3H13Q5T200 1668 aaKnown RBP27.8■■■□□ 2.04
MCF2L-226ENST00000486210 MAST1Q9Y2H9 1570 aa27.77■■■□□ 2.04
MCF2L-226ENST00000486210 TSPY4P0CV99 314 aa27.76■■■□□ 2.03
MCF2L-226ENST00000486210 TSPY10P0CW01 314 aa27.76■■■□□ 2.03
MCF2L-226ENST00000486210 MROH1Q8NDA8 1641 aa27.76■■■□□ 2.03
MCF2L-226ENST00000486210 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
MCF2L-226ENST00000486210 ERVK-7P63135 1459 aa27.74■■■□□ 2.03
MCF2L-226ENST00000486210 LRRC7Q96NW7 1537 aa27.73■■■□□ 2.03
MCF2L-226ENST00000486210 CEP152O94986 1710 aa27.72■■■□□ 2.03
MCF2L-226ENST00000486210 SYNMO15061 1565 aa27.71■■■□□ 2.03
MCF2L-226ENST00000486210 UBR1Q8IWV7 1749 aa27.71■■■□□ 2.03
MCF2L-226ENST00000486210 CFAP65Q6ZU64 1925 aaKnown RBP27.71■■■□□ 2.03
MCF2L-226ENST00000486210 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.03
MCF2L-226ENST00000486210 XIRP1Q702N8 1843 aaKnown RBP27.62■■■□□ 2.01
MCF2L-226ENST00000486210 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
MCF2L-226ENST00000486210 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
MCF2L-226ENST00000486210 SCAF11Q99590 1463 aaKnown RBP27.6■■■□□ 2.01
MCF2L-226ENST00000486210 ARHGAP23Q9P227 1491 aa27.6■■■□□ 2.01
MCF2L-226ENST00000486210 PHF23Q9BUL5 403 aaPredicted RBP27.6■■■□□ 2.01
MCF2L-226ENST00000486210 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
MCF2L-226ENST00000486210 KANK4Q5T7N3 995 aaPredicted RBP27.59■■■□□ 2.01
MCF2L-226ENST00000486210 SLIT1O75093 1534 aa27.58■■■□□ 2.01
MCF2L-226ENST00000486210 LTKP29376 864 aa27.57■■■□□ 2
MCF2L-226ENST00000486210 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
MCF2L-226ENST00000486210 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
MCF2L-226ENST00000486210 ARHGAP31Q2M1Z3 1444 aa27.54■■■□□ 2
MCF2L-226ENST00000486210 MAP3K1Q13233 1512 aa27.53■■■□□ 2
MCF2L-226ENST00000486210 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
MCF2L-226ENST00000486210 PIK3C2BO00750 1634 aa27.52■■■□□ 2
MCF2L-226ENST00000486210 TXNDC2Q86VQ3 553 aa27.51■■□□□ 1.99
MCF2L-226ENST00000486210 KIF15Q9NS87 1388 aa27.48■■□□□ 1.99
MCF2L-226ENST00000486210 ERBINQ96RT1 1412 aa27.48■■□□□ 1.99
MCF2L-226ENST00000486210 RGS17Q9UGC6 210 aaPredicted RBP27.47■■□□□ 1.99
MCF2L-226ENST00000486210 ABCC5O15440 1437 aa27.46■■□□□ 1.99
MCF2L-226ENST00000486210 TMEM2Q9UHN6 1383 aa27.43■■□□□ 1.98
MCF2L-226ENST00000486210 RRP7BPQ9NSQ0 103 aa27.42■■□□□ 1.98
MCF2L-226ENST00000486210 KDM5AP29375 1690 aaKnown RBP27.42■■□□□ 1.98
MCF2L-226ENST00000486210 PTPN23Q9H3S7 1636 aa27.41■■□□□ 1.98
MCF2L-226ENST00000486210 EID1Q9Y6B2 187 aa27.41■■□□□ 1.98
MCF2L-226ENST00000486210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.39■■□□□ 1.982e-6■■■□□ 18.5
MCF2L-226ENST00000486210 FAM135BQ49AJ0 1406 aa27.39■■□□□ 1.97
MCF2L-226ENST00000486210 EFCAB6Q5THR3 1501 aa27.38■■□□□ 1.97
MCF2L-226ENST00000486210 LMTK2Q8IWU2 1503 aa27.37■■□□□ 1.97
MCF2L-226ENST00000486210 TET3O43151 1660 aa27.37■■□□□ 1.97
MCF2L-226ENST00000486210 DAPK1P53355 1430 aa27.37■■□□□ 1.97
MCF2L-226ENST00000486210 TMEM94Q12767 1356 aa27.35■■□□□ 1.97
MCF2L-226ENST00000486210 APLP2Q06481 763 aa27.35■■□□□ 1.97
MCF2L-226ENST00000486210 ROBO1Q9Y6N7 1651 aa27.34■■□□□ 1.97
MCF2L-226ENST00000486210 IDI1Q13907 227 aa27.34■■□□□ 1.97
MCF2L-226ENST00000486210 STAG3Q9UJ98 1225 aa27.32■■□□□ 1.96
MCF2L-226ENST00000486210 KANK1Q14678 1352 aa27.32■■□□□ 1.96
MCF2L-226ENST00000486210 KCNA6P17658 529 aa27.31■■□□□ 1.96
MCF2L-226ENST00000486210 RBM33Q96EV2 1170 aaKnown RBP27.29■■□□□ 1.96
MCF2L-226ENST00000486210 SLC26A8Q96RN1 970 aa27.29■■□□□ 1.96
MCF2L-226ENST00000486210 NOS1P29475 1434 aa27.29■■□□□ 1.96
MCF2L-226ENST00000486210 NWD1Q149M9 1564 aa27.29■■□□□ 1.96
MCF2L-226ENST00000486210 ADGRB3O60242 1522 aa27.28■■□□□ 1.96
MCF2L-226ENST00000486210 FGD6Q6ZV73 1430 aa27.27■■□□□ 1.96
MCF2L-226ENST00000486210 POTEAQ6S8J7 498 aa27.27■■□□□ 1.96
MCF2L-226ENST00000486210 CHIC2Q9UKJ5 165 aa27.25■■□□□ 1.95
MCF2L-226ENST00000486210 ANKRD30AQ9BXX3 1397 aa27.24■■□□□ 1.95
MCF2L-226ENST00000486210 PROSER2Q86WR7 435 aaPredicted RBP27.24■■□□□ 1.95
MCF2L-226ENST00000486210 NKTRP30414 1462 aaKnown RBP27.24■■□□□ 1.95
MCF2L-226ENST00000486210 MYO5BQ9ULV0 1848 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms