RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NPATQ14207 1427 aa14.83□□□□□ -0.04
TMEM39A-208ENST00000486159 KIF3BO15066 747 aa14.82□□□□□ -0.04
TMEM39A-208ENST00000486159 FBXO31Q5XUX0 539 aaPredicted RBP14.82□□□□□ -0.04
TMEM39A-208ENST00000486159 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
TMEM39A-208ENST00000486159 RTEL1-TNFRSF6BF6WH68 1400 aa14.82□□□□□ -0.04
TMEM39A-208ENST00000486159 VPS8Q8N3P4 1428 aa14.82□□□□□ -0.04
TMEM39A-208ENST00000486159 CCDC141Q6ZP82 1450 aa14.81□□□□□ -0.04
TMEM39A-208ENST00000486159 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
TMEM39A-208ENST00000486159 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
TMEM39A-208ENST00000486159 MYO3AQ8NEV4 1616 aa14.81□□□□□ -0.04
TMEM39A-208ENST00000486159 CEP170BQ9Y4F5 1589 aaPredicted RBP14.77□□□□□ -0.04
TMEM39A-208ENST00000486159 ZNF335Q9H4Z2 1342 aaPredicted RBP14.77□□□□□ -0.04
TMEM39A-208ENST00000486159 ZNF142P52746 1687 aaPredicted RBP14.76□□□□□ -0.05
TMEM39A-208ENST00000486159 ARHGEF5Q12774 1597 aa14.74□□□□□ -0.05
TMEM39A-208ENST00000486159 DNMT1P26358 1616 aaKnown RBP14.74□□□□□ -0.05
TMEM39A-208ENST00000486159 TSPY4P0CV99 314 aa14.73□□□□□ -0.05
TMEM39A-208ENST00000486159 TSPY10P0CW01 314 aa14.73□□□□□ -0.05
TMEM39A-208ENST00000486159 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
TMEM39A-208ENST00000486159 WASHC2CQ9Y4E1 1318 aa14.72□□□□□ -0.05
TMEM39A-208ENST00000486159 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
TMEM39A-208ENST00000486159 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.05
TMEM39A-208ENST00000486159 TNRQ92752 1358 aa14.71□□□□□ -0.06
TMEM39A-208ENST00000486159 KDM5DQ9BY66 1539 aa14.7□□□□□ -0.06
TMEM39A-208ENST00000486159 PZPP20742 1482 aa14.69□□□□□ -0.06
TMEM39A-208ENST00000486159 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
TMEM39A-208ENST00000486159 MYOM3Q5VTT5 1437 aa14.69□□□□□ -0.06
TMEM39A-208ENST00000486159 PKD2Q13563 968 aa14.69□□□□□ -0.06
TMEM39A-208ENST00000486159 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
TMEM39A-208ENST00000486159 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
TMEM39A-208ENST00000486159 CFAP65Q6ZU64 1925 aaKnown RBP14.67□□□□□ -0.06
TMEM39A-208ENST00000486159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
TMEM39A-208ENST00000486159 NEURL4Q96JN8 1562 aa14.67□□□□□ -0.06
TMEM39A-208ENST00000486159 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
TMEM39A-208ENST00000486159 MROH1Q8NDA8 1641 aa14.66□□□□□ -0.06
TMEM39A-208ENST00000486159 ABCC3O15438 1527 aa14.66□□□□□ -0.06
TMEM39A-208ENST00000486159 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
TMEM39A-208ENST00000486159 CEP152O94986 1710 aa14.65□□□□□ -0.06
TMEM39A-208ENST00000486159 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
TMEM39A-208ENST00000486159 ABCC5O15440 1437 aa14.65□□□□□ -0.06
TMEM39A-208ENST00000486159 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
TMEM39A-208ENST00000486159 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
TMEM39A-208ENST00000486159 PTPN23Q9H3S7 1636 aa14.63□□□□□ -0.07
TMEM39A-208ENST00000486159 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
TMEM39A-208ENST00000486159 UGGT1Q9NYU2 1555 aa14.61□□□□□ -0.07
TMEM39A-208ENST00000486159 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
TMEM39A-208ENST00000486159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMEM39A-208ENST00000486159 IQSEC2Q5JU85 1478 aa14.61□□□□□ -0.07
TMEM39A-208ENST00000486159 FAM135AQ9P2D6 1515 aa14.6□□□□□ -0.07
TMEM39A-208ENST00000486159 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
TMEM39A-208ENST00000486159 EIF2AK4Q9P2K8 1649 aaKnown RBP14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 ANKLE2Q86XL3 938 aa14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 THEMISQ8N1K5 641 aaPredicted RBP14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 DUOX2Q9NRD8 1548 aa14.59□□□□□ -0.07
TMEM39A-208ENST00000486159 DAPK1P53355 1430 aa14.58□□□□□ -0.07
TMEM39A-208ENST00000486159 NLRP1Q9C000 1473 aa14.58□□□□□ -0.08
TMEM39A-208ENST00000486159 APLP2Q06481 763 aa14.58□□□□□ -0.08
TMEM39A-208ENST00000486159 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.08
TMEM39A-208ENST00000486159 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
TMEM39A-208ENST00000486159 VWDEQ8N2E2 1590 aa14.57□□□□□ -0.08
TMEM39A-208ENST00000486159 ZC3H13Q5T200 1668 aaKnown RBP14.57□□□□□ -0.08
TMEM39A-208ENST00000486159 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
TMEM39A-208ENST00000486159 NPHP4O75161 1426 aaPredicted RBP14.57□□□□□ -0.08
TMEM39A-208ENST00000486159 PIP4K2BP78356 416 aa14.56□□□□□ -0.08
TMEM39A-208ENST00000486159 UBR1Q8IWV7 1749 aa14.55□□□□□ -0.08
TMEM39A-208ENST00000486159 LTKP29376 864 aa14.54□□□□□ -0.08
TMEM39A-208ENST00000486159 MED14O60244 1454 aa14.54□□□□□ -0.08
TMEM39A-208ENST00000486159 DEPDC5O75140 1603 aa14.53□□□□□ -0.08
TMEM39A-208ENST00000486159 IQGAP1P46940 1657 aa14.52□□□□□ -0.08
TMEM39A-208ENST00000486159 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.08
TMEM39A-208ENST00000486159 HSPA1LP34931 641 aa14.52□□□□□ -0.09
TMEM39A-208ENST00000486159 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
TMEM39A-208ENST00000486159 ALKQ9UM73 1620 aa14.52□□□□□ -0.09
TMEM39A-208ENST00000486159 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
TMEM39A-208ENST00000486159 FAM50AQ14320 339 aaKnown RBP14.51□□□□□ -0.09
TMEM39A-208ENST00000486159 CPS1P31327 1500 aa14.51□□□□□ -0.09
TMEM39A-208ENST00000486159 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
TMEM39A-208ENST00000486159 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
TMEM39A-208ENST00000486159 TXNDC2Q86VQ3 553 aa14.49□□□□□ -0.09
TMEM39A-208ENST00000486159 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
TMEM39A-208ENST00000486159 IDI1Q13907 227 aa14.48□□□□□ -0.09
TMEM39A-208ENST00000486159 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
TMEM39A-208ENST00000486159 LRRC7Q96NW7 1537 aa14.47□□□□□ -0.09
TMEM39A-208ENST00000486159 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
TMEM39A-208ENST00000486159 SCAF11Q99590 1463 aaKnown RBP14.46□□□□□ -0.09
TMEM39A-208ENST00000486159 TOM1O60784 492 aa14.46□□□□□ -0.09
TMEM39A-208ENST00000486159 SYNMO15061 1565 aa14.46□□□□□ -0.09
TMEM39A-208ENST00000486159 MED1Q15648 1581 aaPredicted RBP14.45□□□□□ -0.1
TMEM39A-208ENST00000486159 SLIT1O75093 1534 aa14.45□□□□□ -0.1
TMEM39A-208ENST00000486159 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
TMEM39A-208ENST00000486159 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
TMEM39A-208ENST00000486159 KANK1Q14678 1352 aa14.44□□□□□ -0.1
TMEM39A-208ENST00000486159 ADGRL2O95490 1459 aa14.44□□□□□ -0.1
TMEM39A-208ENST00000486159 LMTK2Q8IWU2 1503 aa14.43□□□□□ -0.1
TMEM39A-208ENST00000486159 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
TMEM39A-208ENST00000486159 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
TMEM39A-208ENST00000486159 TMEM2Q9UHN6 1383 aa14.42□□□□□ -0.1
TMEM39A-208ENST00000486159 NOS1P29475 1434 aa14.41□□□□□ -0.1
TMEM39A-208ENST00000486159 SLC26A8Q96RN1 970 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms