RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 DNMT1P26358 1616 aaKnown RBP25.92■■□□□ 1.74
PDE6D-205ENST00000486044 TNRQ92752 1358 aa25.9■■□□□ 1.74
PDE6D-205ENST00000486044 CCDC141Q6ZP82 1450 aa25.89■■□□□ 1.73
PDE6D-205ENST00000486044 WASHC2CQ9Y4E1 1318 aa25.88■■□□□ 1.73
PDE6D-205ENST00000486044 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
PDE6D-205ENST00000486044 FBXO31Q5XUX0 539 aaPredicted RBP25.87■■□□□ 1.73
PDE6D-205ENST00000486044 KDM5DQ9BY66 1539 aa25.86■■□□□ 1.73
PDE6D-205ENST00000486044 PZPP20742 1482 aa25.85■■□□□ 1.73
PDE6D-205ENST00000486044 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
PDE6D-205ENST00000486044 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
PDE6D-205ENST00000486044 ANKLE2Q86XL3 938 aa25.84■■□□□ 1.73
PDE6D-205ENST00000486044 THEMISQ8N1K5 641 aaPredicted RBP25.84■■□□□ 1.73
PDE6D-205ENST00000486044 CAMSAP2Q08AD1 1489 aa25.84■■□□□ 1.73
PDE6D-205ENST00000486044 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
PDE6D-205ENST00000486044 POLR1AO95602 1720 aaPredicted RBP25.83■■□□□ 1.72
PDE6D-205ENST00000486044 TOM1O60784 492 aa25.82■■□□□ 1.72
PDE6D-205ENST00000486044 CPS1P31327 1500 aa25.82■■□□□ 1.72
PDE6D-205ENST00000486044 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
PDE6D-205ENST00000486044 MIA2Q96PC5 1412 aa25.79■■□□□ 1.72
PDE6D-205ENST00000486044 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
PDE6D-205ENST00000486044 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
PDE6D-205ENST00000486044 PIP4K2BP78356 416 aa25.77■■□□□ 1.72
PDE6D-205ENST00000486044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.77■■□□□ 1.72
PDE6D-205ENST00000486044 NEURL4Q96JN8 1562 aa25.77■■□□□ 1.72
PDE6D-205ENST00000486044 ARHGEF5Q12774 1597 aa25.76■■□□□ 1.71
PDE6D-205ENST00000486044 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
PDE6D-205ENST00000486044 HSPA1LP34931 641 aa25.73■■□□□ 1.71
PDE6D-205ENST00000486044 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
PDE6D-205ENST00000486044 MED14O60244 1454 aa25.7■■□□□ 1.7
PDE6D-205ENST00000486044 DEPDC5O75140 1603 aa25.7■■□□□ 1.7
PDE6D-205ENST00000486044 VWDEQ8N2E2 1590 aa25.66■■□□□ 1.7
PDE6D-205ENST00000486044 RNF17Q9BXT8 1623 aaKnown RBP25.65■■□□□ 1.7
PDE6D-205ENST00000486044 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.7
PDE6D-205ENST00000486044 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
PDE6D-205ENST00000486044 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
PDE6D-205ENST00000486044 ABCC3O15438 1527 aa25.63■■□□□ 1.69
PDE6D-205ENST00000486044 IQGAP1P46940 1657 aa25.62■■□□□ 1.69
PDE6D-205ENST00000486044 EIF2AK4Q9P2K8 1649 aaKnown RBP25.61■■□□□ 1.69
PDE6D-205ENST00000486044 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
PDE6D-205ENST00000486044 VPS8Q8N3P4 1428 aa25.6■■□□□ 1.69
PDE6D-205ENST00000486044 ERVK-7P63135 1459 aa25.58■■□□□ 1.69
PDE6D-205ENST00000486044 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
PDE6D-205ENST00000486044 PHF23Q9BUL5 403 aaPredicted RBP25.54■■□□□ 1.68
PDE6D-205ENST00000486044 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
PDE6D-205ENST00000486044 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
PDE6D-205ENST00000486044 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
PDE6D-205ENST00000486044 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
PDE6D-205ENST00000486044 SYNMO15061 1565 aa25.5■■□□□ 1.67
PDE6D-205ENST00000486044 CFAP65Q6ZU64 1925 aaKnown RBP25.5■■□□□ 1.67
PDE6D-205ENST00000486044 MROH1Q8NDA8 1641 aa25.5■■□□□ 1.67
PDE6D-205ENST00000486044 CEP152O94986 1710 aa25.49■■□□□ 1.67
PDE6D-205ENST00000486044 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
PDE6D-205ENST00000486044 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
PDE6D-205ENST00000486044 TXNDC2Q86VQ3 553 aa25.49■■□□□ 1.67
PDE6D-205ENST00000486044 UBR1Q8IWV7 1749 aa25.49■■□□□ 1.67
PDE6D-205ENST00000486044 EID1Q9Y6B2 187 aa25.48■■□□□ 1.67
PDE6D-205ENST00000486044 STRCP1A6NGW2 1772 aa25.48■■□□□ 1.67
PDE6D-205ENST00000486044 ARHGAP31Q2M1Z3 1444 aa25.46■■□□□ 1.67
PDE6D-205ENST00000486044 KIF15Q9NS87 1388 aa25.45■■□□□ 1.67
PDE6D-205ENST00000486044 LOC105371045A0A1W2PR82 267 aa25.45■■□□□ 1.66
PDE6D-205ENST00000486044 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
PDE6D-205ENST00000486044 ERBINQ96RT1 1412 aa25.44■■□□□ 1.66
PDE6D-205ENST00000486044 SLIT1O75093 1534 aa25.43■■□□□ 1.66
PDE6D-205ENST00000486044 LTKP29376 864 aa25.43■■□□□ 1.66
PDE6D-205ENST00000486044 RRP7BPQ9NSQ0 103 aa25.43■■□□□ 1.66
PDE6D-205ENST00000486044 ARHGAP23Q9P227 1491 aa25.42■■□□□ 1.66
PDE6D-205ENST00000486044 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
PDE6D-205ENST00000486044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.41■■□□□ 1.66
PDE6D-205ENST00000486044 STAG3Q9UJ98 1225 aa25.41■■□□□ 1.66
PDE6D-205ENST00000486044 KANK1Q14678 1352 aa25.41■■□□□ 1.66
PDE6D-205ENST00000486044 APLP2Q06481 763 aa25.4■■□□□ 1.66
PDE6D-205ENST00000486044 ABCC5O15440 1437 aa25.38■■□□□ 1.65
PDE6D-205ENST00000486044 TMEM2Q9UHN6 1383 aa25.35■■□□□ 1.65
PDE6D-205ENST00000486044 CROCC2H7BZ55 1655 aa25.35■■□□□ 1.65
PDE6D-205ENST00000486044 PTPN23Q9H3S7 1636 aa25.34■■□□□ 1.65
PDE6D-205ENST00000486044 PIK3C2BO00750 1634 aa25.33■■□□□ 1.65
PDE6D-205ENST00000486044 DAPK1P53355 1430 aa25.32■■□□□ 1.64
PDE6D-205ENST00000486044 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
PDE6D-205ENST00000486044 KDM5AP29375 1690 aaKnown RBP25.29■■□□□ 1.64
PDE6D-205ENST00000486044 EFCAB6Q5THR3 1501 aa25.29■■□□□ 1.64
PDE6D-205ENST00000486044 IDI1Q13907 227 aa25.29■■□□□ 1.64
PDE6D-205ENST00000486044 XIRP1Q702N8 1843 aaKnown RBP25.28■■□□□ 1.64
PDE6D-205ENST00000486044 FAM135BQ49AJ0 1406 aa25.28■■□□□ 1.64
PDE6D-205ENST00000486044 KCNA6P17658 529 aa25.27■■□□□ 1.64
PDE6D-205ENST00000486044 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
PDE6D-205ENST00000486044 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
PDE6D-205ENST00000486044 FGD6Q6ZV73 1430 aa25.26■■□□□ 1.63
PDE6D-205ENST00000486044 TMEM94Q12767 1356 aa25.25■■□□□ 1.63
PDE6D-205ENST00000486044 PROSER2Q86WR7 435 aaPredicted RBP25.24■■□□□ 1.63
PDE6D-205ENST00000486044 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
PDE6D-205ENST00000486044 SLC52A1Q9NWF4 448 aa25.23■■□□□ 1.63
PDE6D-205ENST00000486044 BCANQ96GW7 911 aa25.21■■□□□ 1.63
PDE6D-205ENST00000486044 RGS17Q9UGC6 210 aaPredicted RBP25.2■■□□□ 1.62
PDE6D-205ENST00000486044 NOS1P29475 1434 aa25.2■■□□□ 1.62
PDE6D-205ENST00000486044 TET3O43151 1660 aa25.19■■□□□ 1.62
PDE6D-205ENST00000486044 HDGFP51858 240 aaKnown RBP25.16■■□□□ 1.62
PDE6D-205ENST00000486044 ADGRB3O60242 1522 aa25.16■■□□□ 1.62
PDE6D-205ENST00000486044 NKTRP30414 1462 aaKnown RBP25.15■■□□□ 1.62
PDE6D-205ENST00000486044 RBM33Q96EV2 1170 aaKnown RBP25.14■■□□□ 1.62
PDE6D-205ENST00000486044 MSH6P52701 1360 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms