RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 NISCHQ9Y2I1 1504 aa40.79■■■■■ 4.12
PDE6D-205ENST00000486044 ABCC9O60706 1549 aa37■■■■□ 3.51
PDE6D-205ENST00000486044 CCDC180Q9P1Z9 1646 aa36.73■■■■□ 3.47
PDE6D-205ENST00000486044 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
PDE6D-205ENST00000486044 DNAJC5BQ9UF47 199 aa34.94■■■■□ 3.18
PDE6D-205ENST00000486044 NACADO15069 1562 aa34.83■■■■□ 3.17
PDE6D-205ENST00000486044 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
PDE6D-205ENST00000486044 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
PDE6D-205ENST00000486044 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
PDE6D-205ENST00000486044 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
PDE6D-205ENST00000486044 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
PDE6D-205ENST00000486044 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
PDE6D-205ENST00000486044 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
PDE6D-205ENST00000486044 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
PDE6D-205ENST00000486044 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
PDE6D-205ENST00000486044 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
PDE6D-205ENST00000486044 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
PDE6D-205ENST00000486044 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.92
PDE6D-205ENST00000486044 DNAJC5Q9H3Z4 198 aa32.38■■■□□ 2.77
PDE6D-205ENST00000486044 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
PDE6D-205ENST00000486044 CUX2O14529 1486 aa32.05■■■□□ 2.72
PDE6D-205ENST00000486044 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
PDE6D-205ENST00000486044 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
PDE6D-205ENST00000486044 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
PDE6D-205ENST00000486044 SMARCA4P51532 1647 aa31.86■■■□□ 2.69
PDE6D-205ENST00000486044 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
PDE6D-205ENST00000486044 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
PDE6D-205ENST00000486044 BAZ1BQ9UIG0 1483 aaKnown RBP31.69■■■□□ 2.66
PDE6D-205ENST00000486044 NESP48681 1621 aa31.67■■■□□ 2.66
PDE6D-205ENST00000486044 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
PDE6D-205ENST00000486044 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
PDE6D-205ENST00000486044 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.62
PDE6D-205ENST00000486044 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.62
PDE6D-205ENST00000486044 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
PDE6D-205ENST00000486044 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
PDE6D-205ENST00000486044 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
PDE6D-205ENST00000486044 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
PDE6D-205ENST00000486044 WIZO95785 1651 aa31■■■□□ 2.55
PDE6D-205ENST00000486044 WDR62O43379 1518 aa30.94■■■□□ 2.54
PDE6D-205ENST00000486044 CEP164Q9UPV0 1460 aa30.87■■■□□ 2.53
PDE6D-205ENST00000486044 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
PDE6D-205ENST00000486044 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
PDE6D-205ENST00000486044 CFTRP13569 1480 aa30.74■■■□□ 2.51
PDE6D-205ENST00000486044 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
PDE6D-205ENST00000486044 TOP2AP11388 1531 aaKnown RBP30.62■■■□□ 2.49
PDE6D-205ENST00000486044 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
PDE6D-205ENST00000486044 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
PDE6D-205ENST00000486044 PRDM2Q13029 1718 aa30.37■■■□□ 2.45
PDE6D-205ENST00000486044 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
PDE6D-205ENST00000486044 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
PDE6D-205ENST00000486044 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
PDE6D-205ENST00000486044 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
PDE6D-205ENST00000486044 TOPBP1Q92547 1522 aa30.17■■■□□ 2.42
PDE6D-205ENST00000486044 RIMBP3CA6NJZ7 1639 aa30.12■■■□□ 2.41
PDE6D-205ENST00000486044 RIMBP3BA6NNM3 1639 aa30.12■■■□□ 2.41
PDE6D-205ENST00000486044 RIMBP3Q9UFD9 1639 aa30.12■■■□□ 2.41
PDE6D-205ENST00000486044 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
PDE6D-205ENST00000486044 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
PDE6D-205ENST00000486044 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
PDE6D-205ENST00000486044 AQRO60306 1485 aaKnown RBP eCLIP29.91■■■□□ 2.38
PDE6D-205ENST00000486044 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
PDE6D-205ENST00000486044 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
PDE6D-205ENST00000486044 FBLN2P98095 1184 aa29.85■■■□□ 2.37
PDE6D-205ENST00000486044 CHD1O14646 1710 aa29.84■■■□□ 2.37
PDE6D-205ENST00000486044 POLA1P09884 1462 aaPredicted RBP29.83■■■□□ 2.37
PDE6D-205ENST00000486044 SOGA1O94964 1423 aa29.75■■■□□ 2.35
PDE6D-205ENST00000486044 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
PDE6D-205ENST00000486044 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
PDE6D-205ENST00000486044 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
PDE6D-205ENST00000486044 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
PDE6D-205ENST00000486044 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
PDE6D-205ENST00000486044 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
PDE6D-205ENST00000486044 CHMP7Q8WUX9 453 aaPredicted RBP29.6■■■□□ 2.33
PDE6D-205ENST00000486044 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
PDE6D-205ENST00000486044 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
PDE6D-205ENST00000486044 CUX1P39880 1505 aa29.51■■■□□ 2.32
PDE6D-205ENST00000486044 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
PDE6D-205ENST00000486044 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
PDE6D-205ENST00000486044 CLASP1Q7Z460 1538 aa29.5■■■□□ 2.31
PDE6D-205ENST00000486044 SYNJ2O15056 1496 aa29.44■■■□□ 2.3
PDE6D-205ENST00000486044 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
PDE6D-205ENST00000486044 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
PDE6D-205ENST00000486044 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
PDE6D-205ENST00000486044 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
PDE6D-205ENST00000486044 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
PDE6D-205ENST00000486044 SUPT5HO00267 1087 aaKnown RBP29.15■■■□□ 2.26
PDE6D-205ENST00000486044 GRIN2AQ12879 1464 aa29.11■■■□□ 2.25
PDE6D-205ENST00000486044 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
PDE6D-205ENST00000486044 NUP160Q12769 1436 aa29.02■■■□□ 2.24
PDE6D-205ENST00000486044 ADAMTS12P58397 1594 aa29.01■■■□□ 2.24
PDE6D-205ENST00000486044 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
PDE6D-205ENST00000486044 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
PDE6D-205ENST00000486044 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
PDE6D-205ENST00000486044 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
PDE6D-205ENST00000486044 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
PDE6D-205ENST00000486044 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
PDE6D-205ENST00000486044 SHROOM2Q13796 1616 aa28.9■■■□□ 2.22
PDE6D-205ENST00000486044 PRG4Q92954 1404 aaPredicted RBP28.79■■■□□ 2.2
PDE6D-205ENST00000486044 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
PDE6D-205ENST00000486044 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms