RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 KIF3BO15066 747 aa19.09■□□□□ 0.65
LDLRAP1-206ENST00000485476 TNRQ92752 1358 aa19.08■□□□□ 0.65
LDLRAP1-206ENST00000485476 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
LDLRAP1-206ENST00000485476 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
LDLRAP1-206ENST00000485476 PZPP20742 1482 aa19.07■□□□□ 0.64
LDLRAP1-206ENST00000485476 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
LDLRAP1-206ENST00000485476 THEMISQ8N1K5 641 aaPredicted RBP19.06■□□□□ 0.64
LDLRAP1-206ENST00000485476 NCOA2Q15596 1464 aa19.04■□□□□ 0.64
LDLRAP1-206ENST00000485476 DNMT1P26358 1616 aaKnown RBP19.04■□□□□ 0.64
LDLRAP1-206ENST00000485476 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
LDLRAP1-206ENST00000485476 ANKLE2Q86XL3 938 aa19.04■□□□□ 0.64
LDLRAP1-206ENST00000485476 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
LDLRAP1-206ENST00000485476 MIA2Q96PC5 1412 aa19.03■□□□□ 0.64
LDLRAP1-206ENST00000485476 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
LDLRAP1-206ENST00000485476 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.63
LDLRAP1-206ENST00000485476 CPS1P31327 1500 aa19.01■□□□□ 0.63
LDLRAP1-206ENST00000485476 TOM1O60784 492 aa19.01■□□□□ 0.63
LDLRAP1-206ENST00000485476 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
LDLRAP1-206ENST00000485476 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
LDLRAP1-206ENST00000485476 MED14O60244 1454 aa18.97■□□□□ 0.63
LDLRAP1-206ENST00000485476 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
LDLRAP1-206ENST00000485476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
LDLRAP1-206ENST00000485476 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
LDLRAP1-206ENST00000485476 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
LDLRAP1-206ENST00000485476 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
LDLRAP1-206ENST00000485476 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
LDLRAP1-206ENST00000485476 LRRC9Q6ZRR7 1453 aa18.92■□□□□ 0.62
LDLRAP1-206ENST00000485476 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
LDLRAP1-206ENST00000485476 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
LDLRAP1-206ENST00000485476 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
LDLRAP1-206ENST00000485476 POLR1AO95602 1720 aaPredicted RBP18.9■□□□□ 0.62
LDLRAP1-206ENST00000485476 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
LDLRAP1-206ENST00000485476 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
LDLRAP1-206ENST00000485476 ABCC3O15438 1527 aa18.88■□□□□ 0.61
LDLRAP1-206ENST00000485476 HSPA1LP34931 641 aa18.87■□□□□ 0.61
LDLRAP1-206ENST00000485476 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
LDLRAP1-206ENST00000485476 ZC3H13Q5T200 1668 aaKnown RBP18.86■□□□□ 0.61
LDLRAP1-206ENST00000485476 EIF2AK4Q9P2K8 1649 aaKnown RBP18.86■□□□□ 0.61
LDLRAP1-206ENST00000485476 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
LDLRAP1-206ENST00000485476 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
LDLRAP1-206ENST00000485476 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
LDLRAP1-206ENST00000485476 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
LDLRAP1-206ENST00000485476 DUOX2Q9NRD8 1548 aa18.83■□□□□ 0.6
LDLRAP1-206ENST00000485476 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
LDLRAP1-206ENST00000485476 ERBINQ96RT1 1412 aa18.79■□□□□ 0.6
LDLRAP1-206ENST00000485476 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
LDLRAP1-206ENST00000485476 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
LDLRAP1-206ENST00000485476 EID1Q9Y6B2 187 aa18.77■□□□□ 0.6
LDLRAP1-206ENST00000485476 MROH1Q8NDA8 1641 aa18.77■□□□□ 0.6
LDLRAP1-206ENST00000485476 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
LDLRAP1-206ENST00000485476 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.59
LDLRAP1-206ENST00000485476 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.59
LDLRAP1-206ENST00000485476 SLIT1O75093 1534 aa18.76■□□□□ 0.59
LDLRAP1-206ENST00000485476 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
LDLRAP1-206ENST00000485476 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
LDLRAP1-206ENST00000485476 SYNMO15061 1565 aa18.75■□□□□ 0.59
LDLRAP1-206ENST00000485476 KANK1Q14678 1352 aa18.74■□□□□ 0.59
LDLRAP1-206ENST00000485476 ABCC5O15440 1437 aa18.74■□□□□ 0.59
LDLRAP1-206ENST00000485476 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
LDLRAP1-206ENST00000485476 LTKP29376 864 aa18.73■□□□□ 0.59
LDLRAP1-206ENST00000485476 APLP2Q06481 763 aa18.73■□□□□ 0.59
LDLRAP1-206ENST00000485476 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
LDLRAP1-206ENST00000485476 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
LDLRAP1-206ENST00000485476 RRP7BPQ9NSQ0 103 aa18.71■□□□□ 0.59
LDLRAP1-206ENST00000485476 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
LDLRAP1-206ENST00000485476 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
LDLRAP1-206ENST00000485476 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
LDLRAP1-206ENST00000485476 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
LDLRAP1-206ENST00000485476 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
LDLRAP1-206ENST00000485476 DAPK1P53355 1430 aa18.67■□□□□ 0.58
LDLRAP1-206ENST00000485476 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
LDLRAP1-206ENST00000485476 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
LDLRAP1-206ENST00000485476 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
LDLRAP1-206ENST00000485476 KCNA6P17658 529 aa18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 IDI1Q13907 227 aa18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 CEP152O94986 1710 aa18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 STRCP1A6NGW2 1772 aa18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
LDLRAP1-206ENST00000485476 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
LDLRAP1-206ENST00000485476 EFCAB6Q5THR3 1501 aa18.61■□□□□ 0.57
LDLRAP1-206ENST00000485476 NOS1P29475 1434 aa18.61■□□□□ 0.57
LDLRAP1-206ENST00000485476 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
LDLRAP1-206ENST00000485476 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
LDLRAP1-206ENST00000485476 CFAP65Q6ZU64 1925 aaKnown RBP18.59■□□□□ 0.57
LDLRAP1-206ENST00000485476 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
LDLRAP1-206ENST00000485476 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
LDLRAP1-206ENST00000485476 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.56
LDLRAP1-206ENST00000485476 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
LDLRAP1-206ENST00000485476 TET3O43151 1660 aa18.57■□□□□ 0.56
LDLRAP1-206ENST00000485476 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
LDLRAP1-206ENST00000485476 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
LDLRAP1-206ENST00000485476 NKTRP30414 1462 aaKnown RBP18.54■□□□□ 0.56
LDLRAP1-206ENST00000485476 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
LDLRAP1-206ENST00000485476 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
LDLRAP1-206ENST00000485476 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
LDLRAP1-206ENST00000485476 ADGRB3O60242 1522 aa18.52■□□□□ 0.56
LDLRAP1-206ENST00000485476 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
LDLRAP1-206ENST00000485476 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms