RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 PZPP20742 1482 aa22.12■■□□□ 1.13
NUP188-206ENST00000485158 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
NUP188-206ENST00000485158 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
NUP188-206ENST00000485158 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
NUP188-206ENST00000485158 TNRQ92752 1358 aa22.09■■□□□ 1.13
NUP188-206ENST00000485158 NEURL4Q96JN8 1562 aa22.08■■□□□ 1.13
NUP188-206ENST00000485158 KIF3BO15066 747 aa22.08■■□□□ 1.13
NUP188-206ENST00000485158 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
NUP188-206ENST00000485158 NCOA2Q15596 1464 aa22.08■■□□□ 1.12
NUP188-206ENST00000485158 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
NUP188-206ENST00000485158 CPS1P31327 1500 aa22.06■■□□□ 1.12
NUP188-206ENST00000485158 POLR1AO95602 1720 aaPredicted RBP22.06■■□□□ 1.12
NUP188-206ENST00000485158 ARHGEF5Q12774 1597 aa22.05■■□□□ 1.12
NUP188-206ENST00000485158 NLRP1Q9C000 1473 aa22.04■■□□□ 1.12
NUP188-206ENST00000485158 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
NUP188-206ENST00000485158 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
NUP188-206ENST00000485158 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
NUP188-206ENST00000485158 MED14O60244 1454 aa22.02■■□□□ 1.12
NUP188-206ENST00000485158 ANKLE2Q86XL3 938 aa22■■□□□ 1.11
NUP188-206ENST00000485158 THEMISQ8N1K5 641 aaPredicted RBP22■■□□□ 1.11
NUP188-206ENST00000485158 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
NUP188-206ENST00000485158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.99■■□□□ 1.11
NUP188-206ENST00000485158 VWDEQ8N2E2 1590 aa21.98■■□□□ 1.11
NUP188-206ENST00000485158 UGGT1Q9NYU2 1555 aa21.98■■□□□ 1.11
NUP188-206ENST00000485158 TOM1O60784 492 aa21.97■■□□□ 1.11
NUP188-206ENST00000485158 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
NUP188-206ENST00000485158 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
NUP188-206ENST00000485158 RNF17Q9BXT8 1623 aaKnown RBP21.97■■□□□ 1.11
NUP188-206ENST00000485158 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.11
NUP188-206ENST00000485158 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
NUP188-206ENST00000485158 HSPA1LP34931 641 aa21.93■■□□□ 1.1
NUP188-206ENST00000485158 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
NUP188-206ENST00000485158 ABCC3O15438 1527 aa21.92■■□□□ 1.1
NUP188-206ENST00000485158 LRRC9Q6ZRR7 1453 aa21.92■■□□□ 1.1
NUP188-206ENST00000485158 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
NUP188-206ENST00000485158 ALKQ9UM73 1620 aa21.91■■□□□ 1.1
NUP188-206ENST00000485158 IQGAP1P46940 1657 aa21.88■■□□□ 1.09
NUP188-206ENST00000485158 MED1Q15648 1581 aaPredicted RBP21.88■■□□□ 1.09
NUP188-206ENST00000485158 PIP4K2BP78356 416 aa21.88■■□□□ 1.09
NUP188-206ENST00000485158 VPS8Q8N3P4 1428 aa21.88■■□□□ 1.09
NUP188-206ENST00000485158 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
NUP188-206ENST00000485158 MAP3K1Q13233 1512 aa21.87■■□□□ 1.09
NUP188-206ENST00000485158 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
NUP188-206ENST00000485158 SCAF1Q9H7N4 1312 aaKnown RBP21.84■■□□□ 1.09
NUP188-206ENST00000485158 LRRC7Q96NW7 1537 aa21.83■■□□□ 1.09
NUP188-206ENST00000485158 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
NUP188-206ENST00000485158 STRCP1A6NGW2 1772 aa21.82■■□□□ 1.08
NUP188-206ENST00000485158 SYNMO15061 1565 aa21.81■■□□□ 1.08
NUP188-206ENST00000485158 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
NUP188-206ENST00000485158 DUOX2Q9NRD8 1548 aa21.8■■□□□ 1.08
NUP188-206ENST00000485158 UBR1Q8IWV7 1749 aa21.8■■□□□ 1.08
NUP188-206ENST00000485158 ARHGAP23Q9P227 1491 aa21.79■■□□□ 1.08
NUP188-206ENST00000485158 KANK4Q5T7N3 995 aaPredicted RBP21.79■■□□□ 1.08
NUP188-206ENST00000485158 SLIT1O75093 1534 aa21.78■■□□□ 1.08
NUP188-206ENST00000485158 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
NUP188-206ENST00000485158 PRDM15P57071 1507 aaPredicted RBP21.77■■□□□ 1.08
NUP188-206ENST00000485158 CEP152O94986 1710 aa21.76■■□□□ 1.07
NUP188-206ENST00000485158 ERBINQ96RT1 1412 aa21.74■■□□□ 1.07
NUP188-206ENST00000485158 LTKP29376 864 aa21.73■■□□□ 1.07
NUP188-206ENST00000485158 KIF15Q9NS87 1388 aa21.72■■□□□ 1.07
NUP188-206ENST00000485158 ABCC5O15440 1437 aa21.71■■□□□ 1.07
NUP188-206ENST00000485158 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
NUP188-206ENST00000485158 CROCC2H7BZ55 1655 aa21.69■■□□□ 1.06
NUP188-206ENST00000485158 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
NUP188-206ENST00000485158 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
NUP188-206ENST00000485158 TMEM2Q9UHN6 1383 aa21.66■■□□□ 1.06
NUP188-206ENST00000485158 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
NUP188-206ENST00000485158 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
NUP188-206ENST00000485158 XIRP1Q702N8 1843 aaKnown RBP21.65■■□□□ 1.06
NUP188-206ENST00000485158 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
NUP188-206ENST00000485158 EID1Q9Y6B2 187 aa21.65■■□□□ 1.06
NUP188-206ENST00000485158 PIK3C2BO00750 1634 aa21.64■■□□□ 1.05
NUP188-206ENST00000485158 DAPK1P53355 1430 aa21.63■■□□□ 1.05
NUP188-206ENST00000485158 PTPN23Q9H3S7 1636 aa21.63■■□□□ 1.05
NUP188-206ENST00000485158 RRP7BPQ9NSQ0 103 aa21.63■■□□□ 1.05
NUP188-206ENST00000485158 FAM135BQ49AJ0 1406 aa21.61■■□□□ 1.05
NUP188-206ENST00000485158 KANK1Q14678 1352 aa21.61■■□□□ 1.05
NUP188-206ENST00000485158 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
NUP188-206ENST00000485158 TET3O43151 1660 aa21.59■■□□□ 1.05
NUP188-206ENST00000485158 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.05
NUP188-206ENST00000485158 IDI1Q13907 227 aa21.58■■□□□ 1.05
NUP188-206ENST00000485158 NOS1P29475 1434 aa21.57■■□□□ 1.04
NUP188-206ENST00000485158 RGS17Q9UGC6 210 aaPredicted RBP21.57■■□□□ 1.04
NUP188-206ENST00000485158 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
NUP188-206ENST00000485158 KCNA6P17658 529 aa21.56■■□□□ 1.04
NUP188-206ENST00000485158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.56■■□□□ 1.04
NUP188-206ENST00000485158 TMEM94Q12767 1356 aa21.54■■□□□ 1.04
NUP188-206ENST00000485158 STAG3Q9UJ98 1225 aa21.53■■□□□ 1.04
NUP188-206ENST00000485158 ADGRL2O95490 1459 aa21.52■■□□□ 1.03
NUP188-206ENST00000485158 SENP3Q9H4L4 574 aaPredicted RBP21.51■■□□□ 1.03
NUP188-206ENST00000485158 SLC52A1Q9NWF4 448 aa21.51■■□□□ 1.03
NUP188-206ENST00000485158 NWD1Q149M9 1564 aa21.51■■□□□ 1.03
NUP188-206ENST00000485158 NKTRP30414 1462 aaKnown RBP21.51■■□□□ 1.03
NUP188-206ENST00000485158 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
NUP188-206ENST00000485158 APLP2Q06481 763 aa21.49■■□□□ 1.03
NUP188-206ENST00000485158 RPRD2Q5VT52 1461 aaKnown RBP21.49■■□□□ 1.03
NUP188-206ENST00000485158 SLC26A8Q96RN1 970 aa21.47■■□□□ 1.03
NUP188-206ENST00000485158 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
NUP188-206ENST00000485158 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
NUP188-206ENST00000485158 PROSER2Q86WR7 435 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms