RNA–Protein interactions for RNA: ENST00000480432.5

RFC2-207, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-207ENST00000480432 A2ML1A8K2U0 1454 aa30.53■■■□□ 2.48
RFC2-207ENST00000480432 CCDC141Q6ZP82 1450 aa30.53■■■□□ 2.48
RFC2-207ENST00000480432 FAM135AQ9P2D6 1515 aa30.52■■■□□ 2.48
RFC2-207ENST00000480432 DNMT1P26358 1616 aaKnown RBP30.52■■■□□ 2.48
RFC2-207ENST00000480432 SPATA31D1Q6ZQQ2 1576 aa30.52■■■□□ 2.48
RFC2-207ENST00000480432 CAMSAP2Q08AD1 1489 aa30.5■■■□□ 2.47
RFC2-207ENST00000480432 ILDR2Q71H61 639 aa30.49■■■□□ 2.47
RFC2-207ENST00000480432 KDM5DQ9BY66 1539 aa30.47■■■□□ 2.47
RFC2-207ENST00000480432 RSPH4AQ5TD94 716 aa30.46■■■□□ 2.47
RFC2-207ENST00000480432 ARHGEF5Q12774 1597 aa30.45■■■□□ 2.46
RFC2-207ENST00000480432 POLR1AO95602 1720 aaPredicted RBP30.44■■■□□ 2.46
RFC2-207ENST00000480432 PZPP20742 1482 aa30.44■■■□□ 2.46
RFC2-207ENST00000480432 KIF3BO15066 747 aa30.43■■■□□ 2.46
RFC2-207ENST00000480432 TNRQ92752 1358 aa30.41■■■□□ 2.46
RFC2-207ENST00000480432 NEURL4Q96JN8 1562 aa30.39■■■□□ 2.46
RFC2-207ENST00000480432 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.45
RFC2-207ENST00000480432 MIA2Q96PC5 1412 aa30.39■■■□□ 2.45
RFC2-207ENST00000480432 UBAP1LF5GYI3 381 aa30.38■■■□□ 2.45
RFC2-207ENST00000480432 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
RFC2-207ENST00000480432 SOCS7O14512 581 aa30.37■■■□□ 2.45
RFC2-207ENST00000480432 WASHC2CQ9Y4E1 1318 aa30.35■■■□□ 2.45
RFC2-207ENST00000480432 RNF17Q9BXT8 1623 aaKnown RBP30.32■■■□□ 2.44
RFC2-207ENST00000480432 NLRP1Q9C000 1473 aa30.31■■■□□ 2.44
RFC2-207ENST00000480432 MAST1Q9Y2H9 1570 aa30.31■■■□□ 2.44
RFC2-207ENST00000480432 CPS1P31327 1500 aa30.31■■■□□ 2.44
RFC2-207ENST00000480432 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
RFC2-207ENST00000480432 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
RFC2-207ENST00000480432 ZC3H13Q5T200 1668 aaKnown RBP30.28■■■□□ 2.44
RFC2-207ENST00000480432 UGGT1Q9NYU2 1555 aa30.27■■■□□ 2.44
RFC2-207ENST00000480432 SHANK2Q9UPX8 1470 aa30.26■■■□□ 2.44
RFC2-207ENST00000480432 DEPDC5O75140 1603 aa30.26■■■□□ 2.44
RFC2-207ENST00000480432 EIF2AK4Q9P2K8 1649 aaKnown RBP30.25■■■□□ 2.43
RFC2-207ENST00000480432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.25■■■□□ 2.43
RFC2-207ENST00000480432 THEMISQ8N1K5 641 aaPredicted RBP30.24■■■□□ 2.43
RFC2-207ENST00000480432 MED14O60244 1454 aa30.24■■■□□ 2.43
RFC2-207ENST00000480432 ABCC3O15438 1527 aa30.23■■■□□ 2.43
RFC2-207ENST00000480432 ANKLE2Q86XL3 938 aa30.23■■■□□ 2.43
RFC2-207ENST00000480432 VWDEQ8N2E2 1590 aa30.23■■■□□ 2.43
RFC2-207ENST00000480432 MROH1Q8NDA8 1641 aa30.19■■■□□ 2.42
RFC2-207ENST00000480432 NPHP4O75161 1426 aaPredicted RBP30.18■■■□□ 2.42
RFC2-207ENST00000480432 FGD6Q6ZV73 1430 aa30.18■■■□□ 2.42
RFC2-207ENST00000480432 IQGAP1P46940 1657 aa30.17■■■□□ 2.42
RFC2-207ENST00000480432 ERVK-7P63135 1459 aa30.14■■■□□ 2.42
RFC2-207ENST00000480432 PTPN23Q9H3S7 1636 aa30.14■■■□□ 2.41
RFC2-207ENST00000480432 TOM1O60784 492 aa30.13■■■□□ 2.41
RFC2-207ENST00000480432 CEP152O94986 1710 aa30.13■■■□□ 2.41
RFC2-207ENST00000480432 DUOX2Q9NRD8 1548 aa30.11■■■□□ 2.41
RFC2-207ENST00000480432 HSPA1LP34931 641 aa30.09■■■□□ 2.41
RFC2-207ENST00000480432 ALKQ9UM73 1620 aa30.08■■■□□ 2.41
RFC2-207ENST00000480432 STRCP1A6NGW2 1772 aa30.08■■■□□ 2.41
RFC2-207ENST00000480432 UBR1Q8IWV7 1749 aa30.08■■■□□ 2.41
RFC2-207ENST00000480432 ABCC5O15440 1437 aa30.07■■■□□ 2.4
RFC2-207ENST00000480432 SCAF1Q9H7N4 1312 aaKnown RBP30.07■■■□□ 2.4
RFC2-207ENST00000480432 PIP4K2BP78356 416 aa30.07■■■□□ 2.4
RFC2-207ENST00000480432 CROCC2H7BZ55 1655 aa30.05■■■□□ 2.4
RFC2-207ENST00000480432 MED1Q15648 1581 aaPredicted RBP30.04■■■□□ 2.4
RFC2-207ENST00000480432 PRDM15P57071 1507 aaPredicted RBP30.04■■■□□ 2.4
RFC2-207ENST00000480432 CFAP65Q6ZU64 1925 aaKnown RBP30.04■■■□□ 2.4
RFC2-207ENST00000480432 SYNMO15061 1565 aa30.03■■■□□ 2.4
RFC2-207ENST00000480432 DAPK1P53355 1430 aa30.03■■■□□ 2.4
RFC2-207ENST00000480432 ARHGAP31Q2M1Z3 1444 aa30■■■□□ 2.39
RFC2-207ENST00000480432 LRRC7Q96NW7 1537 aa30■■■□□ 2.39
RFC2-207ENST00000480432 ERBINQ96RT1 1412 aa29.99■■■□□ 2.39
RFC2-207ENST00000480432 KIF15Q9NS87 1388 aa29.98■■■□□ 2.39
RFC2-207ENST00000480432 SCAF11Q99590 1463 aaKnown RBP29.97■■■□□ 2.39
RFC2-207ENST00000480432 ARHGAP23Q9P227 1491 aa29.97■■■□□ 2.39
RFC2-207ENST00000480432 SLIT1O75093 1534 aa29.96■■■□□ 2.39
RFC2-207ENST00000480432 FAM50AQ14320 339 aaKnown RBP29.95■■■□□ 2.39
RFC2-207ENST00000480432 PPARGC1BQ86YN6 1023 aaKnown RBP29.9■■■□□ 2.38
RFC2-207ENST00000480432 ANKRD30AQ9BXX3 1397 aa29.9■■■□□ 2.38
RFC2-207ENST00000480432 RRP7BPQ9NSQ0 103 aa29.89■■■□□ 2.38
RFC2-207ENST00000480432 PIK3C2BO00750 1634 aa29.89■■■□□ 2.37
RFC2-207ENST00000480432 LTKP29376 864 aa29.88■■■□□ 2.37
RFC2-207ENST00000480432 CHIC2Q9UKJ5 165 aa29.87■■■□□ 2.37
RFC2-207ENST00000480432 KDM5AP29375 1690 aaKnown RBP29.87■■■□□ 2.37
RFC2-207ENST00000480432 TXNDC2Q86VQ3 553 aa29.85■■■□□ 2.37
RFC2-207ENST00000480432 XIRP1Q702N8 1843 aaKnown RBP29.85■■■□□ 2.37
RFC2-207ENST00000480432 ADGRL2O95490 1459 aa29.84■■■□□ 2.37
RFC2-207ENST00000480432 LMTK2Q8IWU2 1503 aa29.84■■■□□ 2.37
RFC2-207ENST00000480432 KANK1Q14678 1352 aa29.82■■■□□ 2.36
RFC2-207ENST00000480432 TMEM2Q9UHN6 1383 aa29.81■■■□□ 2.36
RFC2-207ENST00000480432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.8■■■□□ 2.36
RFC2-207ENST00000480432 EID1Q9Y6B2 187 aa29.8■■■□□ 2.36
RFC2-207ENST00000480432 EFCAB6Q5THR3 1501 aa29.77■■■□□ 2.36
RFC2-207ENST00000480432 PHF23Q9BUL5 403 aaPredicted RBP29.73■■■□□ 2.35
RFC2-207ENST00000480432 NOS1P29475 1434 aa29.71■■■□□ 2.35
RFC2-207ENST00000480432 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
RFC2-207ENST00000480432 IDI1Q13907 227 aa29.71■■■□□ 2.35
RFC2-207ENST00000480432 ROCK1Q13464 1354 aa29.71■■■□□ 2.35
RFC2-207ENST00000480432 TET3O43151 1660 aa29.7■■■□□ 2.35
RFC2-207ENST00000480432 STAG3Q9UJ98 1225 aa29.7■■■□□ 2.35
RFC2-207ENST00000480432 ADGRB3O60242 1522 aa29.69■■■□□ 2.34
RFC2-207ENST00000480432 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
RFC2-207ENST00000480432 ANKRD50Q9ULJ7 1429 aa29.67■■■□□ 2.34
RFC2-207ENST00000480432 FAM135BQ49AJ0 1406 aa29.64■■■□□ 2.34
RFC2-207ENST00000480432 KCNA6P17658 529 aa29.63■■■□□ 2.33
RFC2-207ENST00000480432 TMEM94Q12767 1356 aa29.63■■■□□ 2.33
RFC2-207ENST00000480432 NWD1Q149M9 1564 aa29.62■■■□□ 2.33
RFC2-207ENST00000480432 RPRD2Q5VT52 1461 aaKnown RBP29.61■■■□□ 2.33
RFC2-207ENST00000480432 ITGAEP38570 1179 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms