RNA–Protein interactions for RNA: ENST00000480432.5

RFC2-207, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-207ENST00000480432 NISCHQ9Y2I1 1504 aa48.16■■■■■ 5.3
RFC2-207ENST00000480432 ABCC9O60706 1549 aa43.47■■■■■ 4.55
RFC2-207ENST00000480432 CCDC180Q9P1Z9 1646 aa43.38■■■■■ 4.54
RFC2-207ENST00000480432 RB1CC1Q8TDY2 1594 aa41.35■■■■■ 4.21
RFC2-207ENST00000480432 NACADO15069 1562 aa41.03■■■■■ 4.16
RFC2-207ENST00000480432 DNAJC5BQ9UF47 199 aa40.96■■■■■ 4.15
RFC2-207ENST00000480432 DCAF8L2P0C7V8 631 aa40.55■■■■■ 4.08
RFC2-207ENST00000480432 UNC13AQ9UPW8 1703 aa40.46■■■■■ 4.07
RFC2-207ENST00000480432 MYO15BQ96JP2 1530 aa40.43■■■■■ 4.06
RFC2-207ENST00000480432 PABPN1Q86U42 306 aaKnown RBP eCLIP40.37■■■■■ 4.05
RFC2-207ENST00000480432 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
RFC2-207ENST00000480432 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.97
RFC2-207ENST00000480432 DCAF1Q9Y4B6 1507 aa39.82■■■■□ 3.97
RFC2-207ENST00000480432 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
RFC2-207ENST00000480432 SCRIBQ14160 1630 aa39.41■■■■□ 3.9
RFC2-207ENST00000480432 CC2D2AQ9P2K1 1620 aa39.31■■■■□ 3.88
RFC2-207ENST00000480432 CECR2Q9BXF3 1484 aa39.2■■■■□ 3.87
RFC2-207ENST00000480432 EIF4G1Q04637 1599 aaKnown RBP39.18■■■■□ 3.86
RFC2-207ENST00000480432 NCAPD3P42695 1498 aa37.87■■■■□ 3.65
RFC2-207ENST00000480432 DNAJC5Q9H3Z4 198 aa37.8■■■■□ 3.64
RFC2-207ENST00000480432 ATAD2BQ9ULI0 1458 aa37.7■■■■□ 3.63
RFC2-207ENST00000480432 SMARCA4P51532 1647 aa37.62■■■■□ 3.61
RFC2-207ENST00000480432 CUX2O14529 1486 aa37.62■■■■□ 3.61
RFC2-207ENST00000480432 SMARCA2P51531 1590 aa37.6■■■■□ 3.61
RFC2-207ENST00000480432 HMGXB3Q12766 1538 aa37.59■■■■□ 3.61
RFC2-207ENST00000480432 ERCC6Q03468 1493 aa37.53■■■■□ 3.6
RFC2-207ENST00000480432 BAZ1AQ9NRL2 1556 aaPredicted RBP37.4■■■■□ 3.58
RFC2-207ENST00000480432 PEG3Q9GZU2 1588 aa37.31■■■■□ 3.56
RFC2-207ENST00000480432 BAZ1BQ9UIG0 1483 aaKnown RBP37.3■■■■□ 3.56
RFC2-207ENST00000480432 NESP48681 1621 aa37.28■■■■□ 3.56
RFC2-207ENST00000480432 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
RFC2-207ENST00000480432 LAMC3Q9Y6N6 1575 aa37.06■■■■□ 3.52
RFC2-207ENST00000480432 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
RFC2-207ENST00000480432 KIF21AQ7Z4S6 1674 aa36.86■■■■□ 3.49
RFC2-207ENST00000480432 PDS5BQ9NTI5 1447 aa36.8■■■■□ 3.48
RFC2-207ENST00000480432 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
RFC2-207ENST00000480432 WIZO95785 1651 aa36.64■■■■□ 3.46
RFC2-207ENST00000480432 MRC2Q9UBG0 1479 aa36.51■■■■□ 3.44
RFC2-207ENST00000480432 WDR62O43379 1518 aa36.47■■■■□ 3.43
RFC2-207ENST00000480432 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
RFC2-207ENST00000480432 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
RFC2-207ENST00000480432 CFTRP13569 1480 aa36.23■■■■□ 3.39
RFC2-207ENST00000480432 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
RFC2-207ENST00000480432 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
RFC2-207ENST00000480432 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
RFC2-207ENST00000480432 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
RFC2-207ENST00000480432 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
RFC2-207ENST00000480432 OSCARQ8IYS5 282 aa35.78■■■■□ 3.32
RFC2-207ENST00000480432 CCDC88BA6NC98 1476 aa35.73■■■■□ 3.31
RFC2-207ENST00000480432 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
RFC2-207ENST00000480432 TOPBP1Q92547 1522 aa35.56■■■■□ 3.28
RFC2-207ENST00000480432 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
RFC2-207ENST00000480432 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
RFC2-207ENST00000480432 DNMBPQ6XZF7 1577 aa35.42■■■■□ 3.26
RFC2-207ENST00000480432 RIMBP3CA6NJZ7 1639 aa35.41■■■■□ 3.26
RFC2-207ENST00000480432 RIMBP3BA6NNM3 1639 aa35.41■■■■□ 3.26
RFC2-207ENST00000480432 RIMBP3Q9UFD9 1639 aa35.41■■■■□ 3.26
RFC2-207ENST00000480432 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
RFC2-207ENST00000480432 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
RFC2-207ENST00000480432 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
RFC2-207ENST00000480432 CHD1O14646 1710 aa35.18■■■■□ 3.22
RFC2-207ENST00000480432 AQRO60306 1485 aaKnown RBP eCLIP35.17■■■■□ 3.221e-6■■■□□ 18.3
RFC2-207ENST00000480432 POLA1P09884 1462 aaPredicted RBP35.17■■■■□ 3.22
RFC2-207ENST00000480432 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
RFC2-207ENST00000480432 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
RFC2-207ENST00000480432 SOGA1O94964 1423 aa34.98■■■■□ 3.19
RFC2-207ENST00000480432 WDR97A6NE52 1622 aa34.95■■■■□ 3.19
RFC2-207ENST00000480432 CYB5RLQ6IPT4 315 aa34.93■■■■□ 3.18
RFC2-207ENST00000480432 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
RFC2-207ENST00000480432 TDRD9Q8NDG6 1382 aaKnown RBP34.91■■■■□ 3.18
RFC2-207ENST00000480432 FBLN2P98095 1184 aa34.91■■■■□ 3.18
RFC2-207ENST00000480432 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
RFC2-207ENST00000480432 CUX1P39880 1505 aa34.86■■■■□ 3.17
RFC2-207ENST00000480432 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
RFC2-207ENST00000480432 CLASP1Q7Z460 1538 aa34.78■■■■□ 3.16
RFC2-207ENST00000480432 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
RFC2-207ENST00000480432 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
RFC2-207ENST00000480432 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
RFC2-207ENST00000480432 CHMP7Q8WUX9 453 aaPredicted RBP34.66■■■■□ 3.14
RFC2-207ENST00000480432 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
RFC2-207ENST00000480432 PBRM1Q86U86 1689 aa34.62■■■■□ 3.13
RFC2-207ENST00000480432 TRHP20396 242 aaPredicted RBP34.58■■■■□ 3.13
RFC2-207ENST00000480432 GAPVD1Q14C86 1478 aa34.56■■■■□ 3.12
RFC2-207ENST00000480432 ABCA5Q8WWZ7 1642 aa34.53■■■■□ 3.12
RFC2-207ENST00000480432 ABCA10Q8WWZ4 1543 aa34.53■■■■□ 3.12
RFC2-207ENST00000480432 WRNQ14191 1432 aaPredicted RBP eCLIP34.31■■■■□ 3.08
RFC2-207ENST00000480432 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
RFC2-207ENST00000480432 GRIN2AQ12879 1464 aa34.29■■■■□ 3.08
RFC2-207ENST00000480432 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
RFC2-207ENST00000480432 TOP2BQ02880 1626 aa34.26■■■■□ 3.08
RFC2-207ENST00000480432 NUP160Q12769 1436 aa34.2■■■■□ 3.06
RFC2-207ENST00000480432 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
RFC2-207ENST00000480432 ERCC6L2Q5T890 1561 aa34.18■■■■□ 3.06
RFC2-207ENST00000480432 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
RFC2-207ENST00000480432 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
RFC2-207ENST00000480432 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
RFC2-207ENST00000480432 PRG4Q92954 1404 aaPredicted RBP33.84■■■■□ 3.01
RFC2-207ENST00000480432 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
RFC2-207ENST00000480432 JPH4Q96JJ6 628 aa33.77■■■■□ 3
RFC2-207ENST00000480432 KIF13AQ9H1H9 1805 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms