RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
VCP-206ENST00000480327 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
VCP-206ENST00000480327 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
VCP-206ENST00000480327 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.13
VCP-206ENST00000480327 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
VCP-206ENST00000480327 PZPP20742 1482 aa14.19□□□□□ -0.14
VCP-206ENST00000480327 PKD2Q13563 968 aa14.19□□□□□ -0.14
VCP-206ENST00000480327 FBXO31Q5XUX0 539 aaPredicted RBP14.19□□□□□ -0.14
VCP-206ENST00000480327 FAM135AQ9P2D6 1515 aa14.19□□□□□ -0.14
VCP-206ENST00000480327 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
VCP-206ENST00000480327 APLP2Q06481 763 aa14.18□□□□□ -0.14
VCP-206ENST00000480327 MAST1Q9Y2H9 1570 aa14.17□□□□□ -0.14
VCP-206ENST00000480327 MROH1Q8NDA8 1641 aa14.17□□□□□ -0.14
VCP-206ENST00000480327 KIF3BO15066 747 aa14.17□□□□□ -0.14
VCP-206ENST00000480327 CFAP65Q6ZU64 1925 aaKnown RBP14.16□□□□□ -0.14
VCP-206ENST00000480327 TNRQ92752 1358 aa14.16□□□□□ -0.14
VCP-206ENST00000480327 STRCP1A6NGW2 1772 aa14.16□□□□□ -0.14
VCP-206ENST00000480327 VWDEQ8N2E2 1590 aa14.15□□□□□ -0.14
VCP-206ENST00000480327 LRRC9Q6ZRR7 1453 aa14.15□□□□□ -0.14
VCP-206ENST00000480327 KANK4Q5T7N3 995 aaPredicted RBP14.15□□□□□ -0.14
VCP-206ENST00000480327 CEP152O94986 1710 aa14.15□□□□□ -0.14
VCP-206ENST00000480327 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
VCP-206ENST00000480327 ALKQ9UM73 1620 aa14.14□□□□□ -0.15
VCP-206ENST00000480327 DEPDC5O75140 1603 aa14.13□□□□□ -0.15
VCP-206ENST00000480327 EIF2AK4Q9P2K8 1649 aaKnown RBP14.13□□□□□ -0.15
VCP-206ENST00000480327 ABCC3O15438 1527 aa14.13□□□□□ -0.15
VCP-206ENST00000480327 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
VCP-206ENST00000480327 MIA2Q96PC5 1412 aa14.12□□□□□ -0.15
VCP-206ENST00000480327 SOCS7O14512 581 aa14.11□□□□□ -0.15
VCP-206ENST00000480327 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
VCP-206ENST00000480327 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
VCP-206ENST00000480327 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
VCP-206ENST00000480327 SHANK2Q9UPX8 1470 aa14.11□□□□□ -0.15
VCP-206ENST00000480327 CROCC2H7BZ55 1655 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 IQGAP1P46940 1657 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.1□□□□□ -0.15
VCP-206ENST00000480327 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 MED14O60244 1454 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 CPS1P31327 1500 aa14.1□□□□□ -0.15
VCP-206ENST00000480327 ERVK-7P63135 1459 aa14.07□□□□□ -0.16
VCP-206ENST00000480327 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
VCP-206ENST00000480327 NPHP4O75161 1426 aaPredicted RBP14.06□□□□□ -0.16
VCP-206ENST00000480327 MYOM3Q5VTT5 1437 aa14.06□□□□□ -0.16
VCP-206ENST00000480327 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
VCP-206ENST00000480327 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
VCP-206ENST00000480327 PRDM15P57071 1507 aaPredicted RBP14.04□□□□□ -0.16
VCP-206ENST00000480327 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
VCP-206ENST00000480327 MED1Q15648 1581 aaPredicted RBP14.04□□□□□ -0.16
VCP-206ENST00000480327 HSPA1LP34931 641 aa14.03□□□□□ -0.16
VCP-206ENST00000480327 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
VCP-206ENST00000480327 THEMISQ8N1K5 641 aaPredicted RBP14.03□□□□□ -0.16
VCP-206ENST00000480327 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
VCP-206ENST00000480327 SYNMO15061 1565 aa14.01□□□□□ -0.17
VCP-206ENST00000480327 LRRC7Q96NW7 1537 aa14.01□□□□□ -0.17
VCP-206ENST00000480327 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
VCP-206ENST00000480327 ABCC5O15440 1437 aa14□□□□□ -0.17
VCP-206ENST00000480327 PIP4K2BP78356 416 aa14□□□□□ -0.17
VCP-206ENST00000480327 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
VCP-206ENST00000480327 SLIT1O75093 1534 aa13.99□□□□□ -0.17
VCP-206ENST00000480327 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
VCP-206ENST00000480327 KIF15Q9NS87 1388 aa13.96□□□□□ -0.17
VCP-206ENST00000480327 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
VCP-206ENST00000480327 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
VCP-206ENST00000480327 TOM1O60784 492 aa13.96□□□□□ -0.17
VCP-206ENST00000480327 LTKP29376 864 aa13.96□□□□□ -0.17
VCP-206ENST00000480327 ERBINQ96RT1 1412 aa13.96□□□□□ -0.18
VCP-206ENST00000480327 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
VCP-206ENST00000480327 DAPK1P53355 1430 aa13.95□□□□□ -0.18
VCP-206ENST00000480327 MYO5BQ9ULV0 1848 aa13.93□□□□□ -0.18
VCP-206ENST00000480327 LMTK2Q8IWU2 1503 aa13.93□□□□□ -0.18
VCP-206ENST00000480327 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
VCP-206ENST00000480327 RRP7BPQ9NSQ0 103 aa13.92□□□□□ -0.18
VCP-206ENST00000480327 TET3O43151 1660 aa13.91□□□□□ -0.18
VCP-206ENST00000480327 EFCAB6Q5THR3 1501 aa13.9□□□□□ -0.19
VCP-206ENST00000480327 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
VCP-206ENST00000480327 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
VCP-206ENST00000480327 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
VCP-206ENST00000480327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■□□□□ 8.5
VCP-206ENST00000480327 NOS1P29475 1434 aa13.87□□□□□ -0.19
VCP-206ENST00000480327 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
VCP-206ENST00000480327 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
VCP-206ENST00000480327 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
VCP-206ENST00000480327 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
VCP-206ENST00000480327 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
VCP-206ENST00000480327 NWD1Q149M9 1564 aa13.85□□□□□ -0.19
VCP-206ENST00000480327 IDI1Q13907 227 aa13.85□□□□□ -0.19
VCP-206ENST00000480327 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.19
VCP-206ENST00000480327 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
VCP-206ENST00000480327 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.2
VCP-206ENST00000480327 KANK1Q14678 1352 aa13.83□□□□□ -0.2
VCP-206ENST00000480327 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
VCP-206ENST00000480327 UNC13BO14795 1591 aa13.81□□□□□ -0.2
VCP-206ENST00000480327 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
VCP-206ENST00000480327 E9PCH4 1651 aa13.81□□□□□ -0.2
VCP-206ENST00000480327 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
VCP-206ENST00000480327 ITGAEP38570 1179 aa13.8□□□□□ -0.2
VCP-206ENST00000480327 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms