RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CFAP65Q6ZU64 1925 aaKnown RBP10.74□□□□□ -0.69
RTFDC1-206ENST00000477485 PIP4K2BP78356 416 aa10.74□□□□□ -0.69
RTFDC1-206ENST00000477485 KIF3BO15066 747 aa10.73□□□□□ -0.69
RTFDC1-206ENST00000477485 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
RTFDC1-206ENST00000477485 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
RTFDC1-206ENST00000477485 TNRQ92752 1358 aa10.72□□□□□ -0.69
RTFDC1-206ENST00000477485 CCDC141Q6ZP82 1450 aa10.72□□□□□ -0.69
RTFDC1-206ENST00000477485 MBD5Q9P267 1494 aa10.71□□□□□ -0.69
RTFDC1-206ENST00000477485 CEP152O94986 1710 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 IQGAP1P46940 1657 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 MED1Q15648 1581 aaPredicted RBP10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 CPS1P31327 1500 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 RTEL1-TNFRSF6BF6WH68 1400 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 WASHC2CQ9Y4E1 1318 aa10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 FBXO31Q5XUX0 539 aaPredicted RBP10.7□□□□□ -0.7
RTFDC1-206ENST00000477485 UGGT1Q9NYU2 1555 aa10.69□□□□□ -0.7
RTFDC1-206ENST00000477485 PZPP20742 1482 aa10.69□□□□□ -0.7
RTFDC1-206ENST00000477485 NCOA2Q15596 1464 aa10.69□□□□□ -0.7
RTFDC1-206ENST00000477485 ZC3H13Q5T200 1668 aaKnown RBP10.69□□□□□ -0.7
RTFDC1-206ENST00000477485 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
RTFDC1-206ENST00000477485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.68□□□□□ -0.7
RTFDC1-206ENST00000477485 TOM1O60784 492 aa10.68□□□□□ -0.7
RTFDC1-206ENST00000477485 HSPA1LP34931 641 aa10.68□□□□□ -0.7
RTFDC1-206ENST00000477485 FAM135AQ9P2D6 1515 aa10.68□□□□□ -0.7
RTFDC1-206ENST00000477485 ANKLE2Q86XL3 938 aa10.67□□□□□ -0.7
RTFDC1-206ENST00000477485 ARHGEF5Q12774 1597 aa10.67□□□□□ -0.7
RTFDC1-206ENST00000477485 DEPDC5O75140 1603 aa10.66□□□□□ -0.7
RTFDC1-206ENST00000477485 VWDEQ8N2E2 1590 aa10.66□□□□□ -0.7
RTFDC1-206ENST00000477485 STRCP1A6NGW2 1772 aa10.66□□□□□ -0.7
RTFDC1-206ENST00000477485 NPHP4O75161 1426 aaPredicted RBP10.66□□□□□ -0.7
RTFDC1-206ENST00000477485 TSPY4P0CV99 314 aa10.65□□□□□ -0.7
RTFDC1-206ENST00000477485 TSPY10P0CW01 314 aa10.65□□□□□ -0.7
RTFDC1-206ENST00000477485 THEMISQ8N1K5 641 aaPredicted RBP10.65□□□□□ -0.7
RTFDC1-206ENST00000477485 NLRP1Q9C000 1473 aa10.65□□□□□ -0.7
RTFDC1-206ENST00000477485 RNF17Q9BXT8 1623 aaKnown RBP10.65□□□□□ -0.7
RTFDC1-206ENST00000477485 EIF2AK4Q9P2K8 1649 aaKnown RBP10.64□□□□□ -0.71
RTFDC1-206ENST00000477485 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
RTFDC1-206ENST00000477485 SYNMO15061 1565 aa10.64□□□□□ -0.71
RTFDC1-206ENST00000477485 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
RTFDC1-206ENST00000477485 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
RTFDC1-206ENST00000477485 ABCC3O15438 1527 aa10.63□□□□□ -0.71
RTFDC1-206ENST00000477485 MAST1Q9Y2H9 1570 aa10.61□□□□□ -0.71
RTFDC1-206ENST00000477485 MED14O60244 1454 aa10.61□□□□□ -0.71
RTFDC1-206ENST00000477485 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
RTFDC1-206ENST00000477485 ALKQ9UM73 1620 aa10.6□□□□□ -0.71
RTFDC1-206ENST00000477485 ERVK-7P63135 1459 aa10.6□□□□□ -0.71
RTFDC1-206ENST00000477485 MROH1Q8NDA8 1641 aa10.59□□□□□ -0.71
RTFDC1-206ENST00000477485 XIRP1Q702N8 1843 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-206ENST00000477485 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
RTFDC1-206ENST00000477485 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
RTFDC1-206ENST00000477485 PIK3C2BO00750 1634 aa10.57□□□□□ -0.72
RTFDC1-206ENST00000477485 DUOX2Q9NRD8 1548 aa10.57□□□□□ -0.72
RTFDC1-206ENST00000477485 SCAF11Q99590 1463 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-206ENST00000477485 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
RTFDC1-206ENST00000477485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.722e-8■■■□□ 17.3
RTFDC1-206ENST00000477485 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
RTFDC1-206ENST00000477485 MYOM3Q5VTT5 1437 aa10.55□□□□□ -0.72
RTFDC1-206ENST00000477485 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
RTFDC1-206ENST00000477485 PRDM15P57071 1507 aaPredicted RBP10.54□□□□□ -0.72
RTFDC1-206ENST00000477485 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
RTFDC1-206ENST00000477485 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
RTFDC1-206ENST00000477485 KIF15Q9NS87 1388 aa10.52□□□□□ -0.72
RTFDC1-206ENST00000477485 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-206ENST00000477485 RRP7BPQ9NSQ0 103 aa10.52□□□□□ -0.73
RTFDC1-206ENST00000477485 SLIT1O75093 1534 aa10.52□□□□□ -0.73
RTFDC1-206ENST00000477485 KANK1Q14678 1352 aa10.52□□□□□ -0.73
RTFDC1-206ENST00000477485 MYO5BQ9ULV0 1848 aa10.51□□□□□ -0.73
RTFDC1-206ENST00000477485 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
RTFDC1-206ENST00000477485 ERBINQ96RT1 1412 aa10.5□□□□□ -0.73
RTFDC1-206ENST00000477485 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
RTFDC1-206ENST00000477485 LTKP29376 864 aa10.5□□□□□ -0.73
RTFDC1-206ENST00000477485 APLP2Q06481 763 aa10.5□□□□□ -0.73
RTFDC1-206ENST00000477485 BCANQ96GW7 911 aa10.5□□□□□ -0.73
RTFDC1-206ENST00000477485 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
RTFDC1-206ENST00000477485 MAP3K1Q13233 1512 aa10.49□□□□□ -0.73
RTFDC1-206ENST00000477485 EFCAB6Q5THR3 1501 aa10.49□□□□□ -0.73
RTFDC1-206ENST00000477485 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-206ENST00000477485 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
RTFDC1-206ENST00000477485 PHLPP1O60346 1717 aa10.48□□□□□ -0.73
RTFDC1-206ENST00000477485 DAPK1P53355 1430 aa10.48□□□□□ -0.73
RTFDC1-206ENST00000477485 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 TMEM2Q9UHN6 1383 aa10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 ABCC5O15440 1437 aa10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 ARHGAP31Q2M1Z3 1444 aa10.47□□□□□ -0.73
RTFDC1-206ENST00000477485 SLC26A8Q96RN1 970 aa10.46□□□□□ -0.73
RTFDC1-206ENST00000477485 TMEM94Q12767 1356 aa10.46□□□□□ -0.74
RTFDC1-206ENST00000477485 ADGRB3O60242 1522 aa10.46□□□□□ -0.74
RTFDC1-206ENST00000477485 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-206ENST00000477485 ANKRD30AQ9BXX3 1397 aa10.44□□□□□ -0.74
RTFDC1-206ENST00000477485 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-206ENST00000477485 FGD6Q6ZV73 1430 aa10.43□□□□□ -0.74
RTFDC1-206ENST00000477485 NWD1Q149M9 1564 aa10.43□□□□□ -0.74
RTFDC1-206ENST00000477485 LMTK2Q8IWU2 1503 aa10.43□□□□□ -0.74
RTFDC1-206ENST00000477485 FAM135BQ49AJ0 1406 aa10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 MSH6P52701 1360 aa10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 TET3O43151 1660 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms