RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-208ENST00000475309 LMTK3Q96Q04 1460 aa13.43□□□□□ -0.26
WIPI2-208ENST00000475309 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
WIPI2-208ENST00000475309 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
WIPI2-208ENST00000475309 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
WIPI2-208ENST00000475309 FHOD3Q2V2M9 1422 aa13.42□□□□□ -0.26
WIPI2-208ENST00000475309 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
WIPI2-208ENST00000475309 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
WIPI2-208ENST00000475309 CCDC7Q96M83 1385 aa13.41□□□□□ -0.26
WIPI2-208ENST00000475309 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
WIPI2-208ENST00000475309 BCCIPQ9P287 314 aaKnown RBP eCLIP13.4□□□□□ -0.26
WIPI2-208ENST00000475309 PTPN23Q9H3S7 1636 aa13.4□□□□□ -0.27
WIPI2-208ENST00000475309 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
WIPI2-208ENST00000475309 A0A0U1RQG5 324 aaPredicted RBP13.39□□□□□ -0.27
WIPI2-208ENST00000475309 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
WIPI2-208ENST00000475309 L1TD1Q5T7N2 865 aaKnown RBP13.38□□□□□ -0.27
WIPI2-208ENST00000475309 COL17A1Q9UMD9 1497 aaPredicted RBP13.38□□□□□ -0.27
WIPI2-208ENST00000475309 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
WIPI2-208ENST00000475309 KDM2AQ9Y2K7 1162 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 PTPRGP23470 1445 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 HFM1A2PYH4 1435 aa13.37□□□□□ -0.27
WIPI2-208ENST00000475309 SOCS7O14512 581 aa13.36□□□□□ -0.27
WIPI2-208ENST00000475309 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
WIPI2-208ENST00000475309 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
WIPI2-208ENST00000475309 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
WIPI2-208ENST00000475309 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
WIPI2-208ENST00000475309 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
WIPI2-208ENST00000475309 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
WIPI2-208ENST00000475309 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
WIPI2-208ENST00000475309 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.27
WIPI2-208ENST00000475309 ABCC2Q92887 1545 aa13.33□□□□□ -0.27
WIPI2-208ENST00000475309 NAP1L5Q96NT1 182 aaPredicted RBP13.33□□□□□ -0.28
WIPI2-208ENST00000475309 VIRMAQ69YN4 1812 aaKnown RBP13.33□□□□□ -0.28
WIPI2-208ENST00000475309 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
WIPI2-208ENST00000475309 CLCN1P35523 988 aa13.32□□□□□ -0.28
WIPI2-208ENST00000475309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
WIPI2-208ENST00000475309 EFCAB5A4FU69 1503 aa13.31□□□□□ -0.28
WIPI2-208ENST00000475309 FRAT2O75474 233 aaPredicted RBP13.3□□□□□ -0.28
WIPI2-208ENST00000475309 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
WIPI2-208ENST00000475309 EXOC6Q8TAG9 804 aa13.3□□□□□ -0.28
WIPI2-208ENST00000475309 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
WIPI2-208ENST00000475309 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
WIPI2-208ENST00000475309 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
WIPI2-208ENST00000475309 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
WIPI2-208ENST00000475309 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
WIPI2-208ENST00000475309 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.28
WIPI2-208ENST00000475309 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.28
WIPI2-208ENST00000475309 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
WIPI2-208ENST00000475309 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
WIPI2-208ENST00000475309 SAMD9Q5K651 1589 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 NAIPQ13075 1403 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
WIPI2-208ENST00000475309 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
WIPI2-208ENST00000475309 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
WIPI2-208ENST00000475309 DHX29Q7Z478 1369 aaKnown RBP13.24□□□□□ -0.29
WIPI2-208ENST00000475309 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
WIPI2-208ENST00000475309 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
WIPI2-208ENST00000475309 SPATA31E1Q6ZUB1 1445 aa13.23□□□□□ -0.29
WIPI2-208ENST00000475309 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
WIPI2-208ENST00000475309 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
WIPI2-208ENST00000475309 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
WIPI2-208ENST00000475309 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
WIPI2-208ENST00000475309 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
WIPI2-208ENST00000475309 PDCL3Q9H2J4 239 aa13.22□□□□□ -0.29
WIPI2-208ENST00000475309 TPM2P07951 284 aa13.22□□□□□ -0.29
WIPI2-208ENST00000475309 MIA2Q96PC5 1412 aa13.22□□□□□ -0.29
WIPI2-208ENST00000475309 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.29
WIPI2-208ENST00000475309 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
WIPI2-208ENST00000475309 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
WIPI2-208ENST00000475309 POGKQ9P215 609 aa13.19□□□□□ -0.3
WIPI2-208ENST00000475309 ARID4BQ4LE39 1312 aaPredicted RBP13.18□□□□□ -0.3
WIPI2-208ENST00000475309 PTPRMP28827 1452 aa13.18□□□□□ -0.3
WIPI2-208ENST00000475309 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
WIPI2-208ENST00000475309 DISP3Q9P2K9 1392 aa13.17□□□□□ -0.3
WIPI2-208ENST00000475309 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
WIPI2-208ENST00000475309 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
WIPI2-208ENST00000475309 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
WIPI2-208ENST00000475309 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
WIPI2-208ENST00000475309 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
WIPI2-208ENST00000475309 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
WIPI2-208ENST00000475309 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
WIPI2-208ENST00000475309 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
WIPI2-208ENST00000475309 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
WIPI2-208ENST00000475309 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
WIPI2-208ENST00000475309 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
WIPI2-208ENST00000475309 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
WIPI2-208ENST00000475309 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
WIPI2-208ENST00000475309 BECN1Q14457 450 aa13.14□□□□□ -0.31
WIPI2-208ENST00000475309 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
WIPI2-208ENST00000475309 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
WIPI2-208ENST00000475309 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
WIPI2-208ENST00000475309 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
WIPI2-208ENST00000475309 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
WIPI2-208ENST00000475309 L3MBTL2Q969R5 705 aa13.13□□□□□ -0.31
WIPI2-208ENST00000475309 PRDM4Q9UKN5 801 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms