RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-208ENST00000475309 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
WIPI2-208ENST00000475309 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
WIPI2-208ENST00000475309 ABCC9O60706 1549 aa17.83■□□□□ 0.44
WIPI2-208ENST00000475309 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
WIPI2-208ENST00000475309 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
WIPI2-208ENST00000475309 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
WIPI2-208ENST00000475309 HRCP23327 699 aa17.26■□□□□ 0.35
WIPI2-208ENST00000475309 MYT1Q01538 1121 aa17.12■□□□□ 0.33
WIPI2-208ENST00000475309 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
WIPI2-208ENST00000475309 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
WIPI2-208ENST00000475309 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
WIPI2-208ENST00000475309 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
WIPI2-208ENST00000475309 DAXXQ9UER7 740 aaPredicted RBP16.59■□□□□ 0.25
WIPI2-208ENST00000475309 NACADO15069 1562 aa16.55■□□□□ 0.24
WIPI2-208ENST00000475309 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
WIPI2-208ENST00000475309 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
WIPI2-208ENST00000475309 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
WIPI2-208ENST00000475309 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
WIPI2-208ENST00000475309 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
WIPI2-208ENST00000475309 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
WIPI2-208ENST00000475309 APLP2Q06481 763 aa16.42■□□□□ 0.22
WIPI2-208ENST00000475309 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
WIPI2-208ENST00000475309 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
WIPI2-208ENST00000475309 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
WIPI2-208ENST00000475309 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
WIPI2-208ENST00000475309 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
WIPI2-208ENST00000475309 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
WIPI2-208ENST00000475309 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
WIPI2-208ENST00000475309 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
WIPI2-208ENST00000475309 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
WIPI2-208ENST00000475309 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
WIPI2-208ENST00000475309 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
WIPI2-208ENST00000475309 TRIM26Q12899 539 aaPredicted RBP16.12■□□□□ 0.17
WIPI2-208ENST00000475309 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
WIPI2-208ENST00000475309 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
WIPI2-208ENST00000475309 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
WIPI2-208ENST00000475309 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
WIPI2-208ENST00000475309 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
WIPI2-208ENST00000475309 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
WIPI2-208ENST00000475309 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
WIPI2-208ENST00000475309 CUX2O14529 1486 aa15.81■□□□□ 0.12
WIPI2-208ENST00000475309 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
WIPI2-208ENST00000475309 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
WIPI2-208ENST00000475309 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
WIPI2-208ENST00000475309 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
WIPI2-208ENST00000475309 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
WIPI2-208ENST00000475309 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
WIPI2-208ENST00000475309 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
WIPI2-208ENST00000475309 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
WIPI2-208ENST00000475309 ARXQ96QS3 562 aa15.41■□□□□ 0.06
WIPI2-208ENST00000475309 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.05
WIPI2-208ENST00000475309 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
WIPI2-208ENST00000475309 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
WIPI2-208ENST00000475309 FAM9AQ8IZU1 332 aaPredicted RBP15.3■□□□□ 0.04
WIPI2-208ENST00000475309 CCER1Q8TC90 406 aaPredicted RBP15.28■□□□□ 0.04
WIPI2-208ENST00000475309 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
WIPI2-208ENST00000475309 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
WIPI2-208ENST00000475309 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
WIPI2-208ENST00000475309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
WIPI2-208ENST00000475309 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
WIPI2-208ENST00000475309 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
WIPI2-208ENST00000475309 AMER1Q5JTC6 1135 aaPredicted RBP15.16■□□□□ 0.02
WIPI2-208ENST00000475309 NESP48681 1621 aa15.13■□□□□ 0.01
WIPI2-208ENST00000475309 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
WIPI2-208ENST00000475309 YTHDC1Q96MU7 727 aaKnown RBP15.11■□□□□ 0.01
WIPI2-208ENST00000475309 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
WIPI2-208ENST00000475309 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
WIPI2-208ENST00000475309 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
WIPI2-208ENST00000475309 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
WIPI2-208ENST00000475309 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
WIPI2-208ENST00000475309 CSRNP3Q8WYN3 585 aa15.05■□□□□ 0
WIPI2-208ENST00000475309 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
WIPI2-208ENST00000475309 TSHZ2Q9NRE2 1034 aa15.04■□□□□ -0
WIPI2-208ENST00000475309 SMARCA2P51531 1590 aa15.03■□□□□ -0
WIPI2-208ENST00000475309 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
WIPI2-208ENST00000475309 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
WIPI2-208ENST00000475309 KLHL34Q8N239 644 aa15□□□□□ -0.01
WIPI2-208ENST00000475309 MIER1Q8N108 512 aa14.99□□□□□ -0.01
WIPI2-208ENST00000475309 WIZO95785 1651 aa14.98□□□□□ -0.01
WIPI2-208ENST00000475309 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
WIPI2-208ENST00000475309 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
WIPI2-208ENST00000475309 TULP1O00294 542 aaPredicted RBP14.91□□□□□ -0.02
WIPI2-208ENST00000475309 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
WIPI2-208ENST00000475309 HOMEZQ8IX15 550 aa14.89□□□□□ -0.03
WIPI2-208ENST00000475309 WDR62O43379 1518 aa14.87□□□□□ -0.03
WIPI2-208ENST00000475309 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
WIPI2-208ENST00000475309 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
WIPI2-208ENST00000475309 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
WIPI2-208ENST00000475309 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
WIPI2-208ENST00000475309 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
WIPI2-208ENST00000475309 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
WIPI2-208ENST00000475309 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
WIPI2-208ENST00000475309 KCNA4P22459 653 aa14.79□□□□□ -0.04
WIPI2-208ENST00000475309 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
WIPI2-208ENST00000475309 PODXL2Q9NZ53 605 aa14.72□□□□□ -0.05
WIPI2-208ENST00000475309 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
WIPI2-208ENST00000475309 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
WIPI2-208ENST00000475309 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
WIPI2-208ENST00000475309 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
WIPI2-208ENST00000475309 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms