RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 NEURL4Q96JN8 1562 aa28.13■■■□□ 2.09
CUL4A-208ENST00000474116 TNRQ92752 1358 aa28.12■■■□□ 2.09
CUL4A-208ENST00000474116 KIF3BO15066 747 aa28.12■■■□□ 2.09
CUL4A-208ENST00000474116 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
CUL4A-208ENST00000474116 PZPP20742 1482 aa28.1■■■□□ 2.09
CUL4A-208ENST00000474116 CPS1P31327 1500 aa28.09■■■□□ 2.09
CUL4A-208ENST00000474116 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
CUL4A-208ENST00000474116 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.09
CUL4A-208ENST00000474116 FAM135AQ9P2D6 1515 aa28.08■■■□□ 2.09
CUL4A-208ENST00000474116 HSPA1LP34931 641 aa28.08■■■□□ 2.09
CUL4A-208ENST00000474116 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
CUL4A-208ENST00000474116 WASHC2CQ9Y4E1 1318 aa28.04■■■□□ 2.08
CUL4A-208ENST00000474116 TOM1O60784 492 aa28.04■■■□□ 2.08
CUL4A-208ENST00000474116 RSPH4AQ5TD94 716 aa28.04■■■□□ 2.08
CUL4A-208ENST00000474116 PIP4K2BP78356 416 aa28.03■■■□□ 2.08
CUL4A-208ENST00000474116 ANKLE2Q86XL3 938 aa28.03■■■□□ 2.08
CUL4A-208ENST00000474116 MIA2Q96PC5 1412 aa28.02■■■□□ 2.08
CUL4A-208ENST00000474116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.085e-9■■■■□ 24.1
CUL4A-208ENST00000474116 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
CUL4A-208ENST00000474116 SCAF1Q9H7N4 1312 aaKnown RBP28.01■■■□□ 2.07
CUL4A-208ENST00000474116 THEMISQ8N1K5 641 aaPredicted RBP28.01■■■□□ 2.07
CUL4A-208ENST00000474116 VWDEQ8N2E2 1590 aa28.01■■■□□ 2.07
CUL4A-208ENST00000474116 NCOA2Q15596 1464 aa28■■■□□ 2.07
CUL4A-208ENST00000474116 MED1Q15648 1581 aaPredicted RBP27.99■■■□□ 2.07
CUL4A-208ENST00000474116 MED14O60244 1454 aa27.99■■■□□ 2.07
CUL4A-208ENST00000474116 NLRP1Q9C000 1473 aa27.99■■■□□ 2.07
CUL4A-208ENST00000474116 DEPDC5O75140 1603 aa27.97■■■□□ 2.07
CUL4A-208ENST00000474116 UGGT1Q9NYU2 1555 aa27.96■■■□□ 2.07
CUL4A-208ENST00000474116 NPHP4O75161 1426 aaPredicted RBP27.95■■■□□ 2.07
CUL4A-208ENST00000474116 ALKQ9UM73 1620 aa27.95■■■□□ 2.06
CUL4A-208ENST00000474116 ARHGEF5Q12774 1597 aa27.94■■■□□ 2.06
CUL4A-208ENST00000474116 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
CUL4A-208ENST00000474116 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
CUL4A-208ENST00000474116 RNF17Q9BXT8 1623 aaKnown RBP27.88■■■□□ 2.05
CUL4A-208ENST00000474116 IQGAP1P46940 1657 aa27.87■■■□□ 2.05
CUL4A-208ENST00000474116 ABCC3O15438 1527 aa27.86■■■□□ 2.05
CUL4A-208ENST00000474116 STRCP1A6NGW2 1772 aa27.86■■■□□ 2.05
CUL4A-208ENST00000474116 ZC3H13Q5T200 1668 aaKnown RBP27.83■■■□□ 2.05
CUL4A-208ENST00000474116 LRRC7Q96NW7 1537 aa27.82■■■□□ 2.04
CUL4A-208ENST00000474116 MAST1Q9Y2H9 1570 aa27.82■■■□□ 2.04
CUL4A-208ENST00000474116 ERVK-7P63135 1459 aa27.81■■■□□ 2.04
CUL4A-208ENST00000474116 MROH1Q8NDA8 1641 aa27.78■■■□□ 2.04
CUL4A-208ENST00000474116 EIF2AK4Q9P2K8 1649 aaKnown RBP27.78■■■□□ 2.04
CUL4A-208ENST00000474116 LRRC9Q6ZRR7 1453 aa27.76■■■□□ 2.04
CUL4A-208ENST00000474116 SYNMO15061 1565 aa27.75■■■□□ 2.03
CUL4A-208ENST00000474116 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
CUL4A-208ENST00000474116 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
CUL4A-208ENST00000474116 CEP152O94986 1710 aa27.72■■■□□ 2.03
CUL4A-208ENST00000474116 SCAF11Q99590 1463 aaKnown RBP27.7■■■□□ 2.02
CUL4A-208ENST00000474116 CFAP65Q6ZU64 1925 aaKnown RBP27.69■■■□□ 2.02
CUL4A-208ENST00000474116 LTKP29376 864 aa27.69■■■□□ 2.02
CUL4A-208ENST00000474116 ARHGAP23Q9P227 1491 aa27.69■■■□□ 2.02
CUL4A-208ENST00000474116 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
CUL4A-208ENST00000474116 SLIT1O75093 1534 aa27.67■■■□□ 2.02
CUL4A-208ENST00000474116 DUOX2Q9NRD8 1548 aa27.67■■■□□ 2.02
CUL4A-208ENST00000474116 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
CUL4A-208ENST00000474116 KANK4Q5T7N3 995 aaPredicted RBP27.66■■■□□ 2.02
CUL4A-208ENST00000474116 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
CUL4A-208ENST00000474116 ARHGAP31Q2M1Z3 1444 aa27.65■■■□□ 2.02
CUL4A-208ENST00000474116 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
CUL4A-208ENST00000474116 XIRP1Q702N8 1843 aaKnown RBP27.62■■■□□ 2.01
CUL4A-208ENST00000474116 MAP3K1Q13233 1512 aa27.62■■■□□ 2.01
CUL4A-208ENST00000474116 RGS17Q9UGC6 210 aaPredicted RBP27.6■■■□□ 2.01
CUL4A-208ENST00000474116 PRDM15P57071 1507 aaPredicted RBP27.6■■■□□ 2.01
CUL4A-208ENST00000474116 KIF15Q9NS87 1388 aa27.57■■■□□ 2
CUL4A-208ENST00000474116 EID1Q9Y6B2 187 aa27.56■■■□□ 2
CUL4A-208ENST00000474116 ERBINQ96RT1 1412 aa27.55■■■□□ 2
CUL4A-208ENST00000474116 PIK3C2BO00750 1634 aa27.55■■■□□ 2
CUL4A-208ENST00000474116 ABCC5O15440 1437 aa27.54■■■□□ 2
CUL4A-208ENST00000474116 TMEM2Q9UHN6 1383 aa27.54■■■□□ 2
CUL4A-208ENST00000474116 RRP7BPQ9NSQ0 103 aa27.53■■■□□ 2
CUL4A-208ENST00000474116 FAM135BQ49AJ0 1406 aa27.52■■■□□ 2
CUL4A-208ENST00000474116 CROCC2H7BZ55 1655 aa27.51■■□□□ 1.99
CUL4A-208ENST00000474116 LOC105371045A0A1W2PR82 267 aa27.5■■□□□ 1.99
CUL4A-208ENST00000474116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.49■■□□□ 1.99
CUL4A-208ENST00000474116 KDM5AP29375 1690 aaKnown RBP27.48■■□□□ 1.99
CUL4A-208ENST00000474116 IDI1Q13907 227 aa27.47■■□□□ 1.99
CUL4A-208ENST00000474116 TMEM94Q12767 1356 aa27.47■■□□□ 1.99
CUL4A-208ENST00000474116 TET3O43151 1660 aa27.46■■□□□ 1.99
CUL4A-208ENST00000474116 KCNA6P17658 529 aa27.45■■□□□ 1.98
CUL4A-208ENST00000474116 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
CUL4A-208ENST00000474116 EFCAB6Q5THR3 1501 aa27.45■■□□□ 1.98
CUL4A-208ENST00000474116 PTPN23Q9H3S7 1636 aa27.45■■□□□ 1.98
CUL4A-208ENST00000474116 LMTK2Q8IWU2 1503 aa27.44■■□□□ 1.98
CUL4A-208ENST00000474116 KANK1Q14678 1352 aa27.44■■□□□ 1.98
CUL4A-208ENST00000474116 DAPK1P53355 1430 aa27.43■■□□□ 1.98
CUL4A-208ENST00000474116 SLC26A8Q96RN1 970 aa27.4■■□□□ 1.98
CUL4A-208ENST00000474116 POTEAQ6S8J7 498 aa27.39■■□□□ 1.98
CUL4A-208ENST00000474116 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
CUL4A-208ENST00000474116 ROBO1Q9Y6N7 1651 aa27.39■■□□□ 1.97
CUL4A-208ENST00000474116 RBM33Q96EV2 1170 aaKnown RBP27.38■■□□□ 1.97
CUL4A-208ENST00000474116 NOS1P29475 1434 aa27.38■■□□□ 1.97
CUL4A-208ENST00000474116 ANKRD30AQ9BXX3 1397 aa27.35■■□□□ 1.97
CUL4A-208ENST00000474116 NWD1Q149M9 1564 aa27.34■■□□□ 1.97
CUL4A-208ENST00000474116 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
CUL4A-208ENST00000474116 ADGRB3O60242 1522 aa27.33■■□□□ 1.97
CUL4A-208ENST00000474116 CHIC2Q9UKJ5 165 aa27.33■■□□□ 1.97
CUL4A-208ENST00000474116 NKTRP30414 1462 aaKnown RBP27.32■■□□□ 1.96
CUL4A-208ENST00000474116 SLC52A1Q9NWF4 448 aa27.31■■□□□ 1.96
CUL4A-208ENST00000474116 SLAIN2Q9P270 581 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms