RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 AKNAQ7Z591 1439 aa7.87□□□□□ -1.15
LMNB1-205ENST00000472034 PHLDB1Q86UU1 1377 aa7.87□□□□□ -1.15
LMNB1-205ENST00000472034 POTEAQ6S8J7 498 aa7.87□□□□□ -1.15
LMNB1-205ENST00000472034 ABCA9Q8IUA7 1624 aa7.86□□□□□ -1.15
LMNB1-205ENST00000472034 NCKAP5LQ9HCH0 1330 aa7.86□□□□□ -1.15
LMNB1-205ENST00000472034 ABCA8O94911 1581 aa7.86□□□□□ -1.15
LMNB1-205ENST00000472034 ZFYVE16Q7Z3T8 1539 aa7.85□□□□□ -1.15
LMNB1-205ENST00000472034 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
LMNB1-205ENST00000472034 IFNL1Q8IU54 200 aa7.85□□□□□ -1.15
LMNB1-205ENST00000472034 SP7Q8TDD2 431 aaPredicted RBP7.85□□□□□ -1.15
LMNB1-205ENST00000472034 PCDHB8Q9UN66 801 aa7.85□□□□□ -1.15
LMNB1-205ENST00000472034 UGGT2Q9NYU1 1516 aa7.84□□□□□ -1.15
LMNB1-205ENST00000472034 DENND4BO75064 1496 aaPredicted RBP7.84□□□□□ -1.15
LMNB1-205ENST00000472034 MS4A3Q96HJ5 214 aa7.84□□□□□ -1.15
LMNB1-205ENST00000472034 ALKQ9UM73 1620 aa7.84□□□□□ -1.15
LMNB1-205ENST00000472034 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.16
LMNB1-205ENST00000472034 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
LMNB1-205ENST00000472034 FHOD3Q2V2M9 1422 aa7.83□□□□□ -1.16
LMNB1-205ENST00000472034 SETD1BQ9UPS6 1966 aaKnown RBP7.82□□□□□ -1.16
LMNB1-205ENST00000472034 CAMSAP1Q5T5Y3 1602 aa7.82□□□□□ -1.16
LMNB1-205ENST00000472034 GABBR2O75899 941 aa7.82□□□□□ -1.16
LMNB1-205ENST00000472034 PSEN1P49768 467 aa7.82□□□□□ -1.16
LMNB1-205ENST00000472034 ZMYM4Q5VZL5 1548 aa7.82□□□□□ -1.16
LMNB1-205ENST00000472034 STK25O00506 426 aa7.81□□□□□ -1.16
LMNB1-205ENST00000472034 CHGAP10645 457 aaKnown RBP7.81□□□□□ -1.16
LMNB1-205ENST00000472034 C3P01024 1663 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 EFCAB5A4FU69 1503 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 GALR2O43603 387 aaPredicted RBP7.8□□□□□ -1.16
LMNB1-205ENST00000472034 TOM1O60784 492 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 GOLGA2Q08379 1002 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 DCBLD2Q96PD2 775 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 HECW1Q76N89 1606 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 ATP10BO94823 1461 aa7.8□□□□□ -1.16
LMNB1-205ENST00000472034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.79□□□□□ -1.16
LMNB1-205ENST00000472034 TIE1P35590 1138 aa7.79□□□□□ -1.16
LMNB1-205ENST00000472034 ZFP91Q96JP5 570 aaPredicted RBP7.79□□□□□ -1.16
LMNB1-205ENST00000472034 KIF27Q86VH2 1401 aa7.78□□□□□ -1.16
LMNB1-205ENST00000472034 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
LMNB1-205ENST00000472034 STK24Q9Y6E0 443 aa7.78□□□□□ -1.16
LMNB1-205ENST00000472034 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
LMNB1-205ENST00000472034 BCL11BQ9C0K0 894 aaPredicted RBP7.77□□□□□ -1.17
LMNB1-205ENST00000472034 TRAPPC8Q9Y2L5 1435 aa7.77□□□□□ -1.17
LMNB1-205ENST00000472034 HS6ST3Q8IZP7 471 aa7.76□□□□□ -1.17
LMNB1-205ENST00000472034 ATP10AO60312 1499 aa7.75□□□□□ -1.17
LMNB1-205ENST00000472034 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.75□□□□□ -1.17
LMNB1-205ENST00000472034 C9orf84Q5VXU9 1444 aa7.75□□□□□ -1.17
LMNB1-205ENST00000472034 MAGI2Q86UL8 1455 aa7.75□□□□□ -1.17
LMNB1-205ENST00000472034 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
LMNB1-205ENST00000472034 TCOF1Q13428 1488 aaKnown RBP7.73□□□□□ -1.17
LMNB1-205ENST00000472034 TTLL13PA6NNM8 815 aa7.72□□□□□ -1.17
LMNB1-205ENST00000472034 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
LMNB1-205ENST00000472034 CABP2Q9NPB3 220 aa7.72□□□□□ -1.17
LMNB1-205ENST00000472034 BMP2KQ9NSY1 1161 aaPredicted RBP7.72□□□□□ -1.17
LMNB1-205ENST00000472034 RYDENQ9NUL5 291 aaKnown RBP7.72□□□□□ -1.17
LMNB1-205ENST00000472034 TRPC6Q9Y210 931 aa7.71□□□□□ -1.18
LMNB1-205ENST00000472034 SCAPERQ9BY12 1400 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 SHANK2Q9UPX8 1470 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 CPS1P31327 1500 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 MYT1Q01538 1121 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 ASTLQ6HA08 431 aaPredicted RBP7.7□□□□□ -1.18
LMNB1-205ENST00000472034 P3H3Q8IVL6 736 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 TRIM35Q9UPQ4 493 aa7.7□□□□□ -1.18
LMNB1-205ENST00000472034 PTPRKQ15262 1439 aa7.69□□□□□ -1.18
LMNB1-205ENST00000472034 RAPGEF2Q9Y4G8 1499 aa7.69□□□□□ -1.18
LMNB1-205ENST00000472034 ATMINO43313 823 aaPredicted RBP7.69□□□□□ -1.18
LMNB1-205ENST00000472034 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
LMNB1-205ENST00000472034 PLA2R1Q13018 1463 aa7.68□□□□□ -1.18
LMNB1-205ENST00000472034 CFAP74Q9C0B2 1584 aa7.68□□□□□ -1.18
LMNB1-205ENST00000472034 SOX12O15370 315 aa7.68□□□□□ -1.18
LMNB1-205ENST00000472034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.68□□□□□ -1.181e-6■□□□□ 10.8
LMNB1-205ENST00000472034 ATN1P54259 1190 aaPredicted RBP7.67□□□□□ -1.18
LMNB1-205ENST00000472034 GOLGA3Q08378 1498 aa7.67□□□□□ -1.18
LMNB1-205ENST00000472034 VWDEQ8N2E2 1590 aa7.67□□□□□ -1.18
LMNB1-205ENST00000472034 MYO3AQ8NEV4 1616 aa7.67□□□□□ -1.18
LMNB1-205ENST00000472034 SUPT6HQ7KZ85 1726 aaKnown RBP7.66□□□□□ -1.18
LMNB1-205ENST00000472034 IER5LQ5T953 404 aa7.66□□□□□ -1.18
LMNB1-205ENST00000472034 EFCAB3Q8N7B9 438 aa7.66□□□□□ -1.18
LMNB1-205ENST00000472034 NEURL4Q96JN8 1562 aa7.66□□□□□ -1.18
LMNB1-205ENST00000472034 DIP2CQ9Y2E4 1556 aa7.66□□□□□ -1.18
LMNB1-205ENST00000472034 CEP170BQ9Y4F5 1589 aaPredicted RBP7.66□□□□□ -1.18
LMNB1-205ENST00000472034 ZNF142P52746 1687 aaPredicted RBP7.66□□□□□ -1.18
LMNB1-205ENST00000472034 SLC24A1O60721 1099 aa7.65□□□□□ -1.18
LMNB1-205ENST00000472034 NLRP6P59044 892 aa7.65□□□□□ -1.18
LMNB1-205ENST00000472034 SLC39A7Q92504 469 aa7.65□□□□□ -1.18
LMNB1-205ENST00000472034 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
LMNB1-205ENST00000472034 SETBP1Q9Y6X0 1596 aa7.65□□□□□ -1.18
LMNB1-205ENST00000472034 NPATQ14207 1427 aa7.64□□□□□ -1.19
LMNB1-205ENST00000472034 AFAP1Q8N556 730 aa7.64□□□□□ -1.19
LMNB1-205ENST00000472034 SPRYD3Q8NCJ5 442 aa7.64□□□□□ -1.19
LMNB1-205ENST00000472034 STRCP1A6NGW2 1772 aa7.64□□□□□ -1.19
LMNB1-205ENST00000472034 CTTNBP2Q8WZ74 1663 aa7.63□□□□□ -1.19
LMNB1-205ENST00000472034 ABCA6Q8N139 1617 aa7.63□□□□□ -1.19
LMNB1-205ENST00000472034 LRRC7Q96NW7 1537 aa7.63□□□□□ -1.19
LMNB1-205ENST00000472034 SEC24BO95487 1268 aa7.63□□□□□ -1.19
LMNB1-205ENST00000472034 C7P10643 843 aa7.63□□□□□ -1.19
LMNB1-205ENST00000472034 NUP153P49790 1475 aaKnown RBP7.62□□□□□ -1.19
LMNB1-205ENST00000472034 ZMYM3Q14202 1370 aa7.62□□□□□ -1.19
LMNB1-205ENST00000472034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■■■■□ 20
LMNB1-205ENST00000472034 MYT1LQ9UL68 1186 aa7.62□□□□□ -1.19
LMNB1-205ENST00000472034 RAPGEF6Q8TEU7 1601 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms