RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 PKD2Q13563 968 aa19■□□□□ 0.63
GTF3A-205ENST00000466776 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
GTF3A-205ENST00000466776 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
GTF3A-205ENST00000466776 POLR1AO95602 1720 aaPredicted RBP18.98■□□□□ 0.63
GTF3A-205ENST00000466776 KIF3BO15066 747 aa18.97■□□□□ 0.63
GTF3A-205ENST00000466776 TSPY4P0CV99 314 aa18.97■□□□□ 0.63
GTF3A-205ENST00000466776 TSPY10P0CW01 314 aa18.97■□□□□ 0.63
GTF3A-205ENST00000466776 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
GTF3A-205ENST00000466776 NCKAP5LQ9HCH0 1330 aa18.96■□□□□ 0.63
GTF3A-205ENST00000466776 TCOF1Q13428 1488 aaKnown RBP18.96■□□□□ 0.63
GTF3A-205ENST00000466776 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
GTF3A-205ENST00000466776 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
GTF3A-205ENST00000466776 PZPP20742 1482 aa18.94■□□□□ 0.62
GTF3A-205ENST00000466776 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
GTF3A-205ENST00000466776 ZC3H13Q5T200 1668 aaKnown RBP18.92■□□□□ 0.62
GTF3A-205ENST00000466776 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
GTF3A-205ENST00000466776 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
GTF3A-205ENST00000466776 TNRQ92752 1358 aa18.92■□□□□ 0.62
GTF3A-205ENST00000466776 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
GTF3A-205ENST00000466776 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.62
GTF3A-205ENST00000466776 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
GTF3A-205ENST00000466776 MIA2Q96PC5 1412 aa18.87■□□□□ 0.61
GTF3A-205ENST00000466776 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
GTF3A-205ENST00000466776 DISP3Q9P2K9 1392 aa18.87■□□□□ 0.61
GTF3A-205ENST00000466776 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
GTF3A-205ENST00000466776 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
GTF3A-205ENST00000466776 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
GTF3A-205ENST00000466776 FBXO31Q5XUX0 539 aaPredicted RBP18.84■□□□□ 0.61
GTF3A-205ENST00000466776 UGGT1Q9NYU2 1555 aa18.84■□□□□ 0.61
GTF3A-205ENST00000466776 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.6
GTF3A-205ENST00000466776 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
GTF3A-205ENST00000466776 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 APLP2Q06481 763 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
GTF3A-205ENST00000466776 CPS1P31327 1500 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 CEP152O94986 1710 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
GTF3A-205ENST00000466776 ABCC3O15438 1527 aa18.81■□□□□ 0.6
GTF3A-205ENST00000466776 DUOX2Q9NRD8 1548 aa18.81■□□□□ 0.6
GTF3A-205ENST00000466776 ANKLE2Q86XL3 938 aa18.81■□□□□ 0.6
GTF3A-205ENST00000466776 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
GTF3A-205ENST00000466776 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
GTF3A-205ENST00000466776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
GTF3A-205ENST00000466776 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
GTF3A-205ENST00000466776 MROH1Q8NDA8 1641 aa18.77■□□□□ 0.6
GTF3A-205ENST00000466776 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.59
GTF3A-205ENST00000466776 MED14O60244 1454 aa18.75■□□□□ 0.59
GTF3A-205ENST00000466776 ERVK-7P63135 1459 aa18.75■□□□□ 0.59
GTF3A-205ENST00000466776 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
GTF3A-205ENST00000466776 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
GTF3A-205ENST00000466776 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
GTF3A-205ENST00000466776 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
GTF3A-205ENST00000466776 KIF15Q9NS87 1388 aa18.72■□□□□ 0.59
GTF3A-205ENST00000466776 TOM1O60784 492 aa18.72■□□□□ 0.59
GTF3A-205ENST00000466776 VWDEQ8N2E2 1590 aa18.72■□□□□ 0.59
GTF3A-205ENST00000466776 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
GTF3A-205ENST00000466776 KANK1Q14678 1352 aa18.68■□□□□ 0.58
GTF3A-205ENST00000466776 SYNMO15061 1565 aa18.68■□□□□ 0.58
GTF3A-205ENST00000466776 ABCC5O15440 1437 aa18.68■□□□□ 0.58
GTF3A-205ENST00000466776 DAPK1P53355 1430 aa18.67■□□□□ 0.58
GTF3A-205ENST00000466776 ARHGAP31Q2M1Z3 1444 aa18.67■□□□□ 0.58
GTF3A-205ENST00000466776 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
GTF3A-205ENST00000466776 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
GTF3A-205ENST00000466776 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
GTF3A-205ENST00000466776 SOCS7O14512 581 aa18.65■□□□□ 0.58
GTF3A-205ENST00000466776 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
GTF3A-205ENST00000466776 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
GTF3A-205ENST00000466776 PIP4K2BP78356 416 aa18.64■□□□□ 0.57
GTF3A-205ENST00000466776 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
GTF3A-205ENST00000466776 STRCP1A6NGW2 1772 aa18.63■□□□□ 0.57
GTF3A-205ENST00000466776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.578e-8■■□□□ 14.3
GTF3A-205ENST00000466776 SLIT1O75093 1534 aa18.62■□□□□ 0.57
GTF3A-205ENST00000466776 PIK3C2BO00750 1634 aa18.62■□□□□ 0.57
GTF3A-205ENST00000466776 EID1Q9Y6B2 187 aa18.61■□□□□ 0.57
GTF3A-205ENST00000466776 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
GTF3A-205ENST00000466776 ARHGAP23Q9P227 1491 aa18.59■□□□□ 0.57
GTF3A-205ENST00000466776 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
GTF3A-205ENST00000466776 HSPA1LP34931 641 aa18.58■□□□□ 0.56
GTF3A-205ENST00000466776 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
GTF3A-205ENST00000466776 ADRA2BP18089 450 aa18.57■□□□□ 0.56
GTF3A-205ENST00000466776 TXNDC2Q86VQ3 553 aa18.57■□□□□ 0.56
GTF3A-205ENST00000466776 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
GTF3A-205ENST00000466776 EFCAB6Q5THR3 1501 aa18.56■□□□□ 0.56
GTF3A-205ENST00000466776 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
GTF3A-205ENST00000466776 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
GTF3A-205ENST00000466776 TMEM2Q9UHN6 1383 aa18.54■□□□□ 0.56
GTF3A-205ENST00000466776 ALKQ9UM73 1620 aa18.53■□□□□ 0.56
GTF3A-205ENST00000466776 XIRP1Q702N8 1843 aaKnown RBP18.52■□□□□ 0.56
GTF3A-205ENST00000466776 LTKP29376 864 aa18.52■□□□□ 0.56
GTF3A-205ENST00000466776 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
GTF3A-205ENST00000466776 ADGRB3O60242 1522 aa18.5■□□□□ 0.55
GTF3A-205ENST00000466776 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
GTF3A-205ENST00000466776 TET3O43151 1660 aa18.49■□□□□ 0.55
GTF3A-205ENST00000466776 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
GTF3A-205ENST00000466776 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
GTF3A-205ENST00000466776 NOS1P29475 1434 aa18.48■□□□□ 0.55
GTF3A-205ENST00000466776 IDI1Q13907 227 aa18.47■□□□□ 0.55
GTF3A-205ENST00000466776 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
GTF3A-205ENST00000466776 MYO5BQ9ULV0 1848 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms