RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 KDM5DQ9BY66 1539 aa20.16■□□□□ 0.82
ABCD4-203ENST00000465085 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
ABCD4-203ENST00000465085 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
ABCD4-203ENST00000465085 PZPP20742 1482 aa20.13■□□□□ 0.81
ABCD4-203ENST00000465085 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
ABCD4-203ENST00000465085 TNRQ92752 1358 aa20.1■□□□□ 0.81
ABCD4-203ENST00000465085 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
ABCD4-203ENST00000465085 KIF3BO15066 747 aa20.1■□□□□ 0.81
ABCD4-203ENST00000465085 ILDR2Q71H61 639 aa20.09■□□□□ 0.81
ABCD4-203ENST00000465085 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
ABCD4-203ENST00000465085 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
ABCD4-203ENST00000465085 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
ABCD4-203ENST00000465085 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
ABCD4-203ENST00000465085 ZC3H13Q5T200 1668 aaKnown RBP20.05■□□□□ 0.8
ABCD4-203ENST00000465085 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
ABCD4-203ENST00000465085 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
ABCD4-203ENST00000465085 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
ABCD4-203ENST00000465085 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
ABCD4-203ENST00000465085 CPS1P31327 1500 aa20.03■□□□□ 0.8
ABCD4-203ENST00000465085 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
ABCD4-203ENST00000465085 SOCS7O14512 581 aa20.02■□□□□ 0.8
ABCD4-203ENST00000465085 TSPY4P0CV99 314 aa20.02■□□□□ 0.8
ABCD4-203ENST00000465085 TSPY10P0CW01 314 aa20.02■□□□□ 0.8
ABCD4-203ENST00000465085 DEPDC5O75140 1603 aa20.02■□□□□ 0.79
ABCD4-203ENST00000465085 MIA2Q96PC5 1412 aa20.02■□□□□ 0.79
ABCD4-203ENST00000465085 UGGT1Q9NYU2 1555 aa20.01■□□□□ 0.79
ABCD4-203ENST00000465085 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
ABCD4-203ENST00000465085 ABCC3O15438 1527 aa20■□□□□ 0.79
ABCD4-203ENST00000465085 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
ABCD4-203ENST00000465085 MED14O60244 1454 aa19.99■□□□□ 0.79
ABCD4-203ENST00000465085 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
ABCD4-203ENST00000465085 MROH1Q8NDA8 1641 aa19.98■□□□□ 0.79
ABCD4-203ENST00000465085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.97■□□□□ 0.79
ABCD4-203ENST00000465085 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-203ENST00000465085 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
ABCD4-203ENST00000465085 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
ABCD4-203ENST00000465085 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
ABCD4-203ENST00000465085 CEP152O94986 1710 aa19.95■□□□□ 0.78
ABCD4-203ENST00000465085 NPHP4O75161 1426 aaPredicted RBP19.94■□□□□ 0.78
ABCD4-203ENST00000465085 ERVK-7P63135 1459 aa19.93■□□□□ 0.78
ABCD4-203ENST00000465085 CFAP65Q6ZU64 1925 aaKnown RBP19.92■□□□□ 0.78
ABCD4-203ENST00000465085 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
ABCD4-203ENST00000465085 DUOX2Q9NRD8 1548 aa19.92■□□□□ 0.78
ABCD4-203ENST00000465085 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
ABCD4-203ENST00000465085 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
ABCD4-203ENST00000465085 STRCP1A6NGW2 1772 aa19.89■□□□□ 0.77
ABCD4-203ENST00000465085 TOM1O60784 492 aa19.89■□□□□ 0.77
ABCD4-203ENST00000465085 PRDM15P57071 1507 aaPredicted RBP19.88■□□□□ 0.77
ABCD4-203ENST00000465085 ALKQ9UM73 1620 aa19.87■□□□□ 0.77
ABCD4-203ENST00000465085 SYNMO15061 1565 aa19.87■□□□□ 0.77
ABCD4-203ENST00000465085 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
ABCD4-203ENST00000465085 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
ABCD4-203ENST00000465085 HSPA1LP34931 641 aa19.85■□□□□ 0.77
ABCD4-203ENST00000465085 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
ABCD4-203ENST00000465085 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
ABCD4-203ENST00000465085 PIP4K2BP78356 416 aa19.84■□□□□ 0.77
ABCD4-203ENST00000465085 ARHGAP31Q2M1Z3 1444 aa19.84■□□□□ 0.77
ABCD4-203ENST00000465085 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
ABCD4-203ENST00000465085 KIF15Q9NS87 1388 aa19.83■□□□□ 0.76
ABCD4-203ENST00000465085 LRRC7Q96NW7 1537 aa19.82■□□□□ 0.76
ABCD4-203ENST00000465085 SLIT1O75093 1534 aa19.81■□□□□ 0.76
ABCD4-203ENST00000465085 SCAF11Q99590 1463 aaKnown RBP19.81■□□□□ 0.76
ABCD4-203ENST00000465085 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
ABCD4-203ENST00000465085 ABCC5O15440 1437 aa19.81■□□□□ 0.76
ABCD4-203ENST00000465085 KDM5AP29375 1690 aaKnown RBP19.78■□□□□ 0.76
ABCD4-203ENST00000465085 DAPK1P53355 1430 aa19.77■□□□□ 0.76
ABCD4-203ENST00000465085 PIK3C2BO00750 1634 aa19.77■□□□□ 0.76
ABCD4-203ENST00000465085 XIRP1Q702N8 1843 aaKnown RBP19.75■□□□□ 0.75
ABCD4-203ENST00000465085 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
ABCD4-203ENST00000465085 LMTK2Q8IWU2 1503 aa19.74■□□□□ 0.75
ABCD4-203ENST00000465085 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
ABCD4-203ENST00000465085 LTKP29376 864 aa19.72■□□□□ 0.75
ABCD4-203ENST00000465085 KANK1Q14678 1352 aa19.71■□□□□ 0.75
ABCD4-203ENST00000465085 TXNDC2Q86VQ3 553 aa19.71■□□□□ 0.75
ABCD4-203ENST00000465085 APLP2Q06481 763 aa19.7■□□□□ 0.74
ABCD4-203ENST00000465085 EFCAB6Q5THR3 1501 aa19.7■□□□□ 0.74
ABCD4-203ENST00000465085 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
ABCD4-203ENST00000465085 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
ABCD4-203ENST00000465085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.743e-12■□□□□ 9.5
ABCD4-203ENST00000465085 EID1Q9Y6B2 187 aa19.68■□□□□ 0.74
ABCD4-203ENST00000465085 ADGRL2O95490 1459 aa19.66■□□□□ 0.74
ABCD4-203ENST00000465085 NOS1P29475 1434 aa19.64■□□□□ 0.73
ABCD4-203ENST00000465085 ADGRB3O60242 1522 aa19.64■□□□□ 0.73
ABCD4-203ENST00000465085 TET3O43151 1660 aa19.63■□□□□ 0.73
ABCD4-203ENST00000465085 IDI1Q13907 227 aa19.62■□□□□ 0.73
ABCD4-203ENST00000465085 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
ABCD4-203ENST00000465085 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
ABCD4-203ENST00000465085 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
ABCD4-203ENST00000465085 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
ABCD4-203ENST00000465085 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
ABCD4-203ENST00000465085 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.73
ABCD4-203ENST00000465085 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
ABCD4-203ENST00000465085 FAM135BQ49AJ0 1406 aa19.58■□□□□ 0.72
ABCD4-203ENST00000465085 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
ABCD4-203ENST00000465085 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
ABCD4-203ENST00000465085 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
ABCD4-203ENST00000465085 KCNA6P17658 529 aa19.56■□□□□ 0.72
ABCD4-203ENST00000465085 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
ABCD4-203ENST00000465085 ANKRD50Q9ULJ7 1429 aa19.56■□□□□ 0.72
ABCD4-203ENST00000465085 ROBO1Q9Y6N7 1651 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms