RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-204ENST00000463421 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
NFX1-204ENST00000463421 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
NFX1-204ENST00000463421 ARHGEF5Q12774 1597 aa23.66■■□□□ 1.38
NFX1-204ENST00000463421 KIF3BO15066 747 aa23.65■■□□□ 1.38
NFX1-204ENST00000463421 PZPP20742 1482 aa23.63■■□□□ 1.37
NFX1-204ENST00000463421 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
NFX1-204ENST00000463421 ILDR2Q71H61 639 aa23.62■■□□□ 1.37
NFX1-204ENST00000463421 TNRQ92752 1358 aa23.62■■□□□ 1.37
NFX1-204ENST00000463421 NEURL4Q96JN8 1562 aa23.6■■□□□ 1.37
NFX1-204ENST00000463421 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
NFX1-204ENST00000463421 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
NFX1-204ENST00000463421 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.36
NFX1-204ENST00000463421 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
NFX1-204ENST00000463421 RNF17Q9BXT8 1623 aaKnown RBP23.56■■□□□ 1.36
NFX1-204ENST00000463421 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
NFX1-204ENST00000463421 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
NFX1-204ENST00000463421 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
NFX1-204ENST00000463421 LRRC9Q6ZRR7 1453 aa23.55■■□□□ 1.36
NFX1-204ENST00000463421 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
NFX1-204ENST00000463421 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
NFX1-204ENST00000463421 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
NFX1-204ENST00000463421 SOCS7O14512 581 aa23.53■■□□□ 1.36
NFX1-204ENST00000463421 CPS1P31327 1500 aa23.53■■□□□ 1.36
NFX1-204ENST00000463421 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
NFX1-204ENST00000463421 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
NFX1-204ENST00000463421 MIA2Q96PC5 1412 aa23.5■■□□□ 1.35
NFX1-204ENST00000463421 SHANK2Q9UPX8 1470 aa23.49■■□□□ 1.35
NFX1-204ENST00000463421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
NFX1-204ENST00000463421 ABCC3O15438 1527 aa23.49■■□□□ 1.35
NFX1-204ENST00000463421 CEP152O94986 1710 aa23.48■■□□□ 1.35
NFX1-204ENST00000463421 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
NFX1-204ENST00000463421 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
NFX1-204ENST00000463421 THEMISQ8N1K5 641 aaPredicted RBP23.47■■□□□ 1.35
NFX1-204ENST00000463421 VWDEQ8N2E2 1590 aa23.47■■□□□ 1.35
NFX1-204ENST00000463421 MAP3K1Q13233 1512 aa23.46■■□□□ 1.35
NFX1-204ENST00000463421 CFAP65Q6ZU64 1925 aaKnown RBP23.45■■□□□ 1.35
NFX1-204ENST00000463421 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.34
NFX1-204ENST00000463421 MED14O60244 1454 aa23.44■■□□□ 1.34
NFX1-204ENST00000463421 NPHP4O75161 1426 aaPredicted RBP23.43■■□□□ 1.34
NFX1-204ENST00000463421 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
NFX1-204ENST00000463421 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
NFX1-204ENST00000463421 CROCC2H7BZ55 1655 aa23.41■■□□□ 1.34
NFX1-204ENST00000463421 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
NFX1-204ENST00000463421 UBR1Q8IWV7 1749 aa23.4■■□□□ 1.34
NFX1-204ENST00000463421 TOM1O60784 492 aa23.4■■□□□ 1.34
NFX1-204ENST00000463421 DUOX2Q9NRD8 1548 aa23.39■■□□□ 1.34
NFX1-204ENST00000463421 PIP4K2BP78356 416 aa23.39■■□□□ 1.33
NFX1-204ENST00000463421 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
NFX1-204ENST00000463421 STRCP1A6NGW2 1772 aa23.38■■□□□ 1.33
NFX1-204ENST00000463421 LOC105371045A0A1W2PR82 267 aa23.38■■□□□ 1.33
NFX1-204ENST00000463421 SYNMO15061 1565 aa23.35■■□□□ 1.33
NFX1-204ENST00000463421 HSPA1LP34931 641 aa23.35■■□□□ 1.33
NFX1-204ENST00000463421 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
NFX1-204ENST00000463421 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.33
NFX1-204ENST00000463421 PTPN23Q9H3S7 1636 aa23.33■■□□□ 1.33
NFX1-204ENST00000463421 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
NFX1-204ENST00000463421 KIF15Q9NS87 1388 aa23.29■■□□□ 1.32
NFX1-204ENST00000463421 ERBINQ96RT1 1412 aa23.29■■□□□ 1.32
NFX1-204ENST00000463421 SCAF11Q99590 1463 aaKnown RBP23.28■■□□□ 1.32
NFX1-204ENST00000463421 LRRC7Q96NW7 1537 aa23.28■■□□□ 1.32
NFX1-204ENST00000463421 ABCC5O15440 1437 aa23.26■■□□□ 1.31
NFX1-204ENST00000463421 ARHGAP31Q2M1Z3 1444 aa23.26■■□□□ 1.31
NFX1-204ENST00000463421 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
NFX1-204ENST00000463421 SLIT1O75093 1534 aa23.25■■□□□ 1.31
NFX1-204ENST00000463421 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
NFX1-204ENST00000463421 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
NFX1-204ENST00000463421 DAPK1P53355 1430 aa23.23■■□□□ 1.31
NFX1-204ENST00000463421 XIRP1Q702N8 1843 aaKnown RBP23.22■■□□□ 1.31
NFX1-204ENST00000463421 APLP2Q06481 763 aa23.22■■□□□ 1.31
NFX1-204ENST00000463421 KDM5AP29375 1690 aaKnown RBP23.21■■□□□ 1.31
NFX1-204ENST00000463421 KANK1Q14678 1352 aa23.2■■□□□ 1.3
NFX1-204ENST00000463421 FGD6Q6ZV73 1430 aa23.19■■□□□ 1.3
NFX1-204ENST00000463421 TXNDC2Q86VQ3 553 aa23.19■■□□□ 1.3
NFX1-204ENST00000463421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.19■■□□□ 1.3
NFX1-204ENST00000463421 LTKP29376 864 aa23.17■■□□□ 1.3
NFX1-204ENST00000463421 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
NFX1-204ENST00000463421 LMTK2Q8IWU2 1503 aa23.16■■□□□ 1.3
NFX1-204ENST00000463421 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
NFX1-204ENST00000463421 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
NFX1-204ENST00000463421 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
NFX1-204ENST00000463421 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
NFX1-204ENST00000463421 TMEM2Q9UHN6 1383 aa23.13■■□□□ 1.29
NFX1-204ENST00000463421 STAG3Q9UJ98 1225 aa23.12■■□□□ 1.29
NFX1-204ENST00000463421 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
NFX1-204ENST00000463421 ADGRB3O60242 1522 aa23.08■■□□□ 1.29
NFX1-204ENST00000463421 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
NFX1-204ENST00000463421 IDI1Q13907 227 aa23.05■■□□□ 1.28
NFX1-204ENST00000463421 TET3O43151 1660 aa23.05■■□□□ 1.28
NFX1-204ENST00000463421 NOS1P29475 1434 aa23.05■■□□□ 1.28
NFX1-204ENST00000463421 MYO5BQ9ULV0 1848 aa23.05■■□□□ 1.28
NFX1-204ENST00000463421 GCC2Q8IWJ2 1684 aa23.01■■□□□ 1.27
NFX1-204ENST00000463421 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
NFX1-204ENST00000463421 TMEM94Q12767 1356 aa23■■□□□ 1.27
NFX1-204ENST00000463421 RPRD2Q5VT52 1461 aaKnown RBP22.99■■□□□ 1.27
NFX1-204ENST00000463421 ROBO1Q9Y6N7 1651 aa22.99■■□□□ 1.27
NFX1-204ENST00000463421 KCNA6P17658 529 aa22.98■■□□□ 1.27
NFX1-204ENST00000463421 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
NFX1-204ENST00000463421 FAM135BQ49AJ0 1406 aa22.98■■□□□ 1.27
NFX1-204ENST00000463421 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
NFX1-204ENST00000463421 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms