RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
SF3A3-203ENST00000461869 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
SF3A3-203ENST00000461869 RSPH4AQ5TD94 716 aa24.4■■□□□ 1.5
SF3A3-203ENST00000461869 TNRQ92752 1358 aa24.4■■□□□ 1.5
SF3A3-203ENST00000461869 CCDC141Q6ZP82 1450 aa24.39■■□□□ 1.5
SF3A3-203ENST00000461869 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
SF3A3-203ENST00000461869 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
SF3A3-203ENST00000461869 CAMSAP2Q08AD1 1489 aa24.37■■□□□ 1.49
SF3A3-203ENST00000461869 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
SF3A3-203ENST00000461869 PZPP20742 1482 aa24.35■■□□□ 1.49
SF3A3-203ENST00000461869 FAM135AQ9P2D6 1515 aa24.32■■□□□ 1.48
SF3A3-203ENST00000461869 TSPY4P0CV99 314 aa24.32■■□□□ 1.48
SF3A3-203ENST00000461869 TSPY10P0CW01 314 aa24.32■■□□□ 1.48
SF3A3-203ENST00000461869 ANKLE2Q86XL3 938 aa24.31■■□□□ 1.48
SF3A3-203ENST00000461869 THEMISQ8N1K5 641 aaPredicted RBP24.3■■□□□ 1.48
SF3A3-203ENST00000461869 MIA2Q96PC5 1412 aa24.29■■□□□ 1.48
SF3A3-203ENST00000461869 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
SF3A3-203ENST00000461869 NEURL4Q96JN8 1562 aa24.29■■□□□ 1.48
SF3A3-203ENST00000461869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
SF3A3-203ENST00000461869 POLR1AO95602 1720 aaPredicted RBP24.28■■□□□ 1.48
SF3A3-203ENST00000461869 SHANK2Q9UPX8 1470 aa24.27■■□□□ 1.48
SF3A3-203ENST00000461869 CPS1P31327 1500 aa24.27■■□□□ 1.48
SF3A3-203ENST00000461869 TOM1O60784 492 aa24.27■■□□□ 1.48
SF3A3-203ENST00000461869 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
SF3A3-203ENST00000461869 ARHGEF5Q12774 1597 aa24.26■■□□□ 1.47
SF3A3-203ENST00000461869 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
SF3A3-203ENST00000461869 HSPA1LP34931 641 aa24.24■■□□□ 1.47
SF3A3-203ENST00000461869 UGGT1Q9NYU2 1555 aa24.24■■□□□ 1.47
SF3A3-203ENST00000461869 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
SF3A3-203ENST00000461869 MED14O60244 1454 aa24.19■■□□□ 1.46
SF3A3-203ENST00000461869 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
SF3A3-203ENST00000461869 VWDEQ8N2E2 1590 aa24.18■■□□□ 1.46
SF3A3-203ENST00000461869 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
SF3A3-203ENST00000461869 RNF17Q9BXT8 1623 aaKnown RBP24.16■■□□□ 1.46
SF3A3-203ENST00000461869 ABCC3O15438 1527 aa24.15■■□□□ 1.46
SF3A3-203ENST00000461869 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
SF3A3-203ENST00000461869 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
SF3A3-203ENST00000461869 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
SF3A3-203ENST00000461869 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
SF3A3-203ENST00000461869 ERVK-7P63135 1459 aa24.11■■□□□ 1.45
SF3A3-203ENST00000461869 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
SF3A3-203ENST00000461869 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
SF3A3-203ENST00000461869 MED1Q15648 1581 aaPredicted RBP24.1■■□□□ 1.45
SF3A3-203ENST00000461869 MYOM3Q5VTT5 1437 aa24.08■■□□□ 1.44
SF3A3-203ENST00000461869 MROH1Q8NDA8 1641 aa24.06■■□□□ 1.44
SF3A3-203ENST00000461869 ALKQ9UM73 1620 aa24.06■■□□□ 1.44
SF3A3-203ENST00000461869 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
SF3A3-203ENST00000461869 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
SF3A3-203ENST00000461869 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
SF3A3-203ENST00000461869 CEP152O94986 1710 aa24.03■■□□□ 1.44
SF3A3-203ENST00000461869 STRCP1A6NGW2 1772 aa24.02■■□□□ 1.44
SF3A3-203ENST00000461869 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
SF3A3-203ENST00000461869 TXNDC2Q86VQ3 553 aa24.01■■□□□ 1.43
SF3A3-203ENST00000461869 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
SF3A3-203ENST00000461869 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
SF3A3-203ENST00000461869 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
SF3A3-203ENST00000461869 RRP7BPQ9NSQ0 103 aa24■■□□□ 1.43
SF3A3-203ENST00000461869 LTKP29376 864 aa23.99■■□□□ 1.43
SF3A3-203ENST00000461869 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
SF3A3-203ENST00000461869 SYNMO15061 1565 aa23.99■■□□□ 1.43
SF3A3-203ENST00000461869 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
SF3A3-203ENST00000461869 ARHGAP31Q2M1Z3 1444 aa23.98■■□□□ 1.43
SF3A3-203ENST00000461869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.97■■□□□ 1.437e-7■■■□□ 18.1
SF3A3-203ENST00000461869 ABCC5O15440 1437 aa23.96■■□□□ 1.43
SF3A3-203ENST00000461869 EID1Q9Y6B2 187 aa23.96■■□□□ 1.43
SF3A3-203ENST00000461869 ARHGAP23Q9P227 1491 aa23.95■■□□□ 1.42
SF3A3-203ENST00000461869 ERBINQ96RT1 1412 aa23.95■■□□□ 1.42
SF3A3-203ENST00000461869 SLIT1O75093 1534 aa23.94■■□□□ 1.42
SF3A3-203ENST00000461869 PRDM15P57071 1507 aaPredicted RBP23.94■■□□□ 1.42
SF3A3-203ENST00000461869 APLP2Q06481 763 aa23.91■■□□□ 1.42
SF3A3-203ENST00000461869 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
SF3A3-203ENST00000461869 KANK1Q14678 1352 aa23.91■■□□□ 1.42
SF3A3-203ENST00000461869 PTPN23Q9H3S7 1636 aa23.9■■□□□ 1.42
SF3A3-203ENST00000461869 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.42
SF3A3-203ENST00000461869 DAPK1P53355 1430 aa23.89■■□□□ 1.41
SF3A3-203ENST00000461869 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
SF3A3-203ENST00000461869 PIK3C2BO00750 1634 aa23.87■■□□□ 1.41
SF3A3-203ENST00000461869 IDI1Q13907 227 aa23.85■■□□□ 1.41
SF3A3-203ENST00000461869 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
SF3A3-203ENST00000461869 ANKRD30AQ9BXX3 1397 aa23.83■■□□□ 1.41
SF3A3-203ENST00000461869 FGD6Q6ZV73 1430 aa23.83■■□□□ 1.4
SF3A3-203ENST00000461869 EFCAB6Q5THR3 1501 aa23.81■■□□□ 1.4
SF3A3-203ENST00000461869 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
SF3A3-203ENST00000461869 XIRP1Q702N8 1843 aaKnown RBP23.8■■□□□ 1.4
SF3A3-203ENST00000461869 KCNA6P17658 529 aa23.79■■□□□ 1.4
SF3A3-203ENST00000461869 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
SF3A3-203ENST00000461869 TMEM94Q12767 1356 aa23.78■■□□□ 1.4
SF3A3-203ENST00000461869 FAM135BQ49AJ0 1406 aa23.78■■□□□ 1.4
SF3A3-203ENST00000461869 KDM5AP29375 1690 aaKnown RBP23.77■■□□□ 1.4
SF3A3-203ENST00000461869 PROSER2Q86WR7 435 aaPredicted RBP23.76■■□□□ 1.39
SF3A3-203ENST00000461869 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
SF3A3-203ENST00000461869 NOS1P29475 1434 aa23.75■■□□□ 1.39
SF3A3-203ENST00000461869 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
SF3A3-203ENST00000461869 TET3O43151 1660 aa23.73■■□□□ 1.39
SF3A3-203ENST00000461869 BCANQ96GW7 911 aa23.73■■□□□ 1.39
SF3A3-203ENST00000461869 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
SF3A3-203ENST00000461869 ADGRB3O60242 1522 aa23.71■■□□□ 1.39
SF3A3-203ENST00000461869 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
SF3A3-203ENST00000461869 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
SF3A3-203ENST00000461869 NKTRP30414 1462 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms