RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 ADGBQ8N7X0 1667 aa19.47■□□□□ 0.71
C4A-244ENST00000460060 UBAP1LF5GYI3 381 aa19.47■□□□□ 0.71
C4A-244ENST00000460060 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
C4A-244ENST00000460060 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
C4A-244ENST00000460060 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
C4A-244ENST00000460060 DHX29Q7Z478 1369 aaKnown RBP19.44■□□□□ 0.7
C4A-244ENST00000460060 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
C4A-244ENST00000460060 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
C4A-244ENST00000460060 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
C4A-244ENST00000460060 KIF3BO15066 747 aa19.38■□□□□ 0.69
C4A-244ENST00000460060 FBXO31Q5XUX0 539 aaPredicted RBP19.38■□□□□ 0.69
C4A-244ENST00000460060 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
C4A-244ENST00000460060 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
C4A-244ENST00000460060 TNRQ92752 1358 aa19.36■□□□□ 0.69
C4A-244ENST00000460060 MIA2Q96PC5 1412 aa19.35■□□□□ 0.69
C4A-244ENST00000460060 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
C4A-244ENST00000460060 PZPP20742 1482 aa19.33■□□□□ 0.68
C4A-244ENST00000460060 WASHC2CQ9Y4E1 1318 aa19.32■□□□□ 0.68
C4A-244ENST00000460060 FAM50AQ14320 339 aaKnown RBP19.32■□□□□ 0.68
C4A-244ENST00000460060 CCDC141Q6ZP82 1450 aa19.32■□□□□ 0.68
C4A-244ENST00000460060 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
C4A-244ENST00000460060 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
C4A-244ENST00000460060 ANKLE2Q86XL3 938 aa19.31■□□□□ 0.68
C4A-244ENST00000460060 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
C4A-244ENST00000460060 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
C4A-244ENST00000460060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.68
C4A-244ENST00000460060 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
C4A-244ENST00000460060 TOM1O60784 492 aa19.3■□□□□ 0.68
C4A-244ENST00000460060 THEMISQ8N1K5 641 aaPredicted RBP19.3■□□□□ 0.68
C4A-244ENST00000460060 CPS1P31327 1500 aa19.3■□□□□ 0.68
C4A-244ENST00000460060 SHANK2Q9UPX8 1470 aa19.29■□□□□ 0.68
C4A-244ENST00000460060 HSPA1LP34931 641 aa19.29■□□□□ 0.68
C4A-244ENST00000460060 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
C4A-244ENST00000460060 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
C4A-244ENST00000460060 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
C4A-244ENST00000460060 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
C4A-244ENST00000460060 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
C4A-244ENST00000460060 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
C4A-244ENST00000460060 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
C4A-244ENST00000460060 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
C4A-244ENST00000460060 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
C4A-244ENST00000460060 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
C4A-244ENST00000460060 MED14O60244 1454 aa19.23■□□□□ 0.67
C4A-244ENST00000460060 NPHP4O75161 1426 aaPredicted RBP19.23■□□□□ 0.67
C4A-244ENST00000460060 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
C4A-244ENST00000460060 ITGAEP38570 1179 aa19.21■□□□□ 0.67
C4A-244ENST00000460060 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
C4A-244ENST00000460060 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
C4A-244ENST00000460060 ALKQ9UM73 1620 aa19.17■□□□□ 0.66
C4A-244ENST00000460060 CFAP65Q6ZU64 1925 aaKnown RBP19.16■□□□□ 0.66
C4A-244ENST00000460060 ABCC3O15438 1527 aa19.15■□□□□ 0.66
C4A-244ENST00000460060 IQGAP1P46940 1657 aa19.15■□□□□ 0.66
C4A-244ENST00000460060 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
C4A-244ENST00000460060 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.65
C4A-244ENST00000460060 ABCC5O15440 1437 aa19.13■□□□□ 0.65
C4A-244ENST00000460060 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
C4A-244ENST00000460060 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
C4A-244ENST00000460060 DAPK1P53355 1430 aa19.12■□□□□ 0.65
C4A-244ENST00000460060 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
C4A-244ENST00000460060 LRRC7Q96NW7 1537 aa19.11■□□□□ 0.65
C4A-244ENST00000460060 MROH1Q8NDA8 1641 aa19.1■□□□□ 0.65
C4A-244ENST00000460060 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
C4A-244ENST00000460060 CEP152O94986 1710 aa19.08■□□□□ 0.64
C4A-244ENST00000460060 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
C4A-244ENST00000460060 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
C4A-244ENST00000460060 LTKP29376 864 aa19.06■□□□□ 0.64
C4A-244ENST00000460060 DUOX2Q9NRD8 1548 aa19.05■□□□□ 0.64
C4A-244ENST00000460060 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
C4A-244ENST00000460060 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
C4A-244ENST00000460060 SYNMO15061 1565 aa19.05■□□□□ 0.64
C4A-244ENST00000460060 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
C4A-244ENST00000460060 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
C4A-244ENST00000460060 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
C4A-244ENST00000460060 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
C4A-244ENST00000460060 SLIT1O75093 1534 aa19.02■□□□□ 0.64
C4A-244ENST00000460060 RRP7BPQ9NSQ0 103 aa19■□□□□ 0.63
C4A-244ENST00000460060 EID1Q9Y6B2 187 aa19■□□□□ 0.63
C4A-244ENST00000460060 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
C4A-244ENST00000460060 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
C4A-244ENST00000460060 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
C4A-244ENST00000460060 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
C4A-244ENST00000460060 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
C4A-244ENST00000460060 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
C4A-244ENST00000460060 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
C4A-244ENST00000460060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
C4A-244ENST00000460060 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
C4A-244ENST00000460060 NAIPQ13075 1403 aa18.96■□□□□ 0.63
C4A-244ENST00000460060 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
C4A-244ENST00000460060 TMEM2Q9UHN6 1383 aa18.95■□□□□ 0.62
C4A-244ENST00000460060 RGS17Q9UGC6 210 aaPredicted RBP18.95■□□□□ 0.62
C4A-244ENST00000460060 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
C4A-244ENST00000460060 STAG3Q9UJ98 1225 aa18.94■□□□□ 0.62
C4A-244ENST00000460060 HRCP23327 699 aa18.93■□□□□ 0.62
C4A-244ENST00000460060 IDI1Q13907 227 aa18.93■□□□□ 0.62
C4A-244ENST00000460060 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
C4A-244ENST00000460060 KANK1Q14678 1352 aa18.92■□□□□ 0.62
C4A-244ENST00000460060 RAB3GAP2Q9H2M9 1393 aa18.92■□□□□ 0.62
C4A-244ENST00000460060 KCNA6P17658 529 aa18.91■□□□□ 0.62
C4A-244ENST00000460060 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
C4A-244ENST00000460060 TMEM94Q12767 1356 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms