RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
C4A-244ENST00000460060 ABCC9O60706 1549 aa27.74■■■□□ 2.03
C4A-244ENST00000460060 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
C4A-244ENST00000460060 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
C4A-244ENST00000460060 RB1CC1Q8TDY2 1594 aa26.28■■□□□ 1.8
C4A-244ENST00000460060 NACADO15069 1562 aa26.06■■□□□ 1.76
C4A-244ENST00000460060 DCAF8L2P0C7V8 631 aa25.91■■□□□ 1.74
C4A-244ENST00000460060 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
C4A-244ENST00000460060 UNC13AQ9UPW8 1703 aa25.69■■□□□ 1.7
C4A-244ENST00000460060 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
C4A-244ENST00000460060 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
C4A-244ENST00000460060 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
C4A-244ENST00000460060 DCAF1Q9Y4B6 1507 aa25.2■■□□□ 1.62
C4A-244ENST00000460060 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
C4A-244ENST00000460060 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
C4A-244ENST00000460060 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
C4A-244ENST00000460060 SCRIBQ14160 1630 aa25■■□□□ 1.59
C4A-244ENST00000460060 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
C4A-244ENST00000460060 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
C4A-244ENST00000460060 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
C4A-244ENST00000460060 CUX2O14529 1486 aa24.01■■□□□ 1.43
C4A-244ENST00000460060 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
C4A-244ENST00000460060 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
C4A-244ENST00000460060 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
C4A-244ENST00000460060 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
C4A-244ENST00000460060 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
C4A-244ENST00000460060 NESP48681 1621 aa23.77■■□□□ 1.4
C4A-244ENST00000460060 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
C4A-244ENST00000460060 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
C4A-244ENST00000460060 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
C4A-244ENST00000460060 THOC2Q8NI27 1593 aaKnown RBP23.55■■□□□ 1.36
C4A-244ENST00000460060 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
C4A-244ENST00000460060 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
C4A-244ENST00000460060 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
C4A-244ENST00000460060 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
C4A-244ENST00000460060 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
C4A-244ENST00000460060 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
C4A-244ENST00000460060 WIZO95785 1651 aa23.21■■□□□ 1.31
C4A-244ENST00000460060 WDR62O43379 1518 aa23.18■■□□□ 1.3
C4A-244ENST00000460060 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
C4A-244ENST00000460060 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
C4A-244ENST00000460060 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
C4A-244ENST00000460060 CFTRP13569 1480 aa23■■□□□ 1.27
C4A-244ENST00000460060 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
C4A-244ENST00000460060 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
C4A-244ENST00000460060 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
C4A-244ENST00000460060 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
C4A-244ENST00000460060 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
C4A-244ENST00000460060 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
C4A-244ENST00000460060 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
C4A-244ENST00000460060 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
C4A-244ENST00000460060 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
C4A-244ENST00000460060 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
C4A-244ENST00000460060 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
C4A-244ENST00000460060 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
C4A-244ENST00000460060 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
C4A-244ENST00000460060 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
C4A-244ENST00000460060 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
C4A-244ENST00000460060 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
C4A-244ENST00000460060 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
C4A-244ENST00000460060 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
C4A-244ENST00000460060 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
C4A-244ENST00000460060 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.18
C4A-244ENST00000460060 CHD1O14646 1710 aa22.36■■□□□ 1.17
C4A-244ENST00000460060 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
C4A-244ENST00000460060 FBLN2P98095 1184 aa22.32■■□□□ 1.16
C4A-244ENST00000460060 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
C4A-244ENST00000460060 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
C4A-244ENST00000460060 SOGA1O94964 1423 aa22.25■■□□□ 1.15
C4A-244ENST00000460060 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
C4A-244ENST00000460060 TRHP20396 242 aaPredicted RBP22.21■■□□□ 1.15
C4A-244ENST00000460060 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
C4A-244ENST00000460060 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
C4A-244ENST00000460060 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
C4A-244ENST00000460060 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
C4A-244ENST00000460060 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
C4A-244ENST00000460060 CUX1P39880 1505 aa22.1■■□□□ 1.13
C4A-244ENST00000460060 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
C4A-244ENST00000460060 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
C4A-244ENST00000460060 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
C4A-244ENST00000460060 SYNJ2O15056 1496 aa22.02■■□□□ 1.12
C4A-244ENST00000460060 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
C4A-244ENST00000460060 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
C4A-244ENST00000460060 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
C4A-244ENST00000460060 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
C4A-244ENST00000460060 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
C4A-244ENST00000460060 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
C4A-244ENST00000460060 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
C4A-244ENST00000460060 AEBP2Q6ZN18 517 aaPredicted RBP21.75■■□□□ 1.07
C4A-244ENST00000460060 NUP160Q12769 1436 aa21.73■■□□□ 1.07
C4A-244ENST00000460060 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
C4A-244ENST00000460060 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
C4A-244ENST00000460060 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
C4A-244ENST00000460060 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
C4A-244ENST00000460060 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
C4A-244ENST00000460060 SHROOM2Q13796 1616 aa21.64■■□□□ 1.05
C4A-244ENST00000460060 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
C4A-244ENST00000460060 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
C4A-244ENST00000460060 JPH4Q96JJ6 628 aa21.56■■□□□ 1.04
C4A-244ENST00000460060 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms