RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 FBXO31Q5XUX0 539 aaPredicted RBP38.95■■■■□ 3.83
PMS1-214ENST00000446877 WASHC2CQ9Y4E1 1318 aa38.94■■■■□ 3.82
PMS1-214ENST00000446877 TNRQ92752 1358 aa38.94■■■■□ 3.82
PMS1-214ENST00000446877 CCDC141Q6ZP82 1450 aa38.93■■■■□ 3.82
PMS1-214ENST00000446877 TSPY4P0CV99 314 aa38.89■■■■□ 3.82
PMS1-214ENST00000446877 TSPY10P0CW01 314 aa38.89■■■■□ 3.82
PMS1-214ENST00000446877 NCOA2Q15596 1464 aa38.89■■■■□ 3.82
PMS1-214ENST00000446877 CAMSAP2Q08AD1 1489 aa38.86■■■■□ 3.81
PMS1-214ENST00000446877 DNMT1P26358 1616 aaKnown RBP38.85■■■■□ 3.81
PMS1-214ENST00000446877 PZPP20742 1482 aa38.83■■■■□ 3.81
PMS1-214ENST00000446877 KDM5DQ9BY66 1539 aa38.83■■■■□ 3.81
PMS1-214ENST00000446877 ANKLE2Q86XL3 938 aa38.82■■■■□ 3.8
PMS1-214ENST00000446877 THEMISQ8N1K5 641 aaPredicted RBP38.82■■■■□ 3.8
PMS1-214ENST00000446877 FAM135AQ9P2D6 1515 aa38.8■■■■□ 3.8
PMS1-214ENST00000446877 SCAF1Q9H7N4 1312 aaKnown RBP38.77■■■■□ 3.8
PMS1-214ENST00000446877 MIA2Q96PC5 1412 aa38.76■■■■□ 3.8
PMS1-214ENST00000446877 TOM1O60784 492 aa38.75■■■■□ 3.79
PMS1-214ENST00000446877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.74■■■■□ 3.79
PMS1-214ENST00000446877 PIP4K2BP78356 416 aa38.73■■■■□ 3.79
PMS1-214ENST00000446877 NLRP1Q9C000 1473 aa38.7■■■■□ 3.79
PMS1-214ENST00000446877 SHANK2Q9UPX8 1470 aa38.7■■■■□ 3.79
PMS1-214ENST00000446877 CPS1P31327 1500 aa38.69■■■■□ 3.78
PMS1-214ENST00000446877 ARHGEF5Q12774 1597 aa38.68■■■■□ 3.78
PMS1-214ENST00000446877 NEURL4Q96JN8 1562 aa38.65■■■■□ 3.78
PMS1-214ENST00000446877 HSPA1LP34931 641 aa38.64■■■■□ 3.78
PMS1-214ENST00000446877 UGGT1Q9NYU2 1555 aa38.63■■■■□ 3.77
PMS1-214ENST00000446877 POLR1AO95602 1720 aaPredicted RBP38.62■■■■□ 3.77
PMS1-214ENST00000446877 NPHP4O75161 1426 aaPredicted RBP38.61■■■■□ 3.77
PMS1-214ENST00000446877 LRRC9Q6ZRR7 1453 aa38.6■■■■□ 3.77
PMS1-214ENST00000446877 VPS8Q8N3P4 1428 aa38.57■■■■□ 3.77
PMS1-214ENST00000446877 MED14O60244 1454 aa38.55■■■■□ 3.76
PMS1-214ENST00000446877 KANK4Q5T7N3 995 aaPredicted RBP38.51■■■■□ 3.76
PMS1-214ENST00000446877 ABCC3O15438 1527 aa38.51■■■■□ 3.76
PMS1-214ENST00000446877 VWDEQ8N2E2 1590 aa38.5■■■■□ 3.75
PMS1-214ENST00000446877 LOC105371045A0A1W2PR82 267 aa38.5■■■■□ 3.75
PMS1-214ENST00000446877 DEPDC5O75140 1603 aa38.49■■■■□ 3.75
PMS1-214ENST00000446877 MAST1Q9Y2H9 1570 aa38.48■■■■□ 3.75
PMS1-214ENST00000446877 RNF17Q9BXT8 1623 aaKnown RBP38.47■■■■□ 3.75
PMS1-214ENST00000446877 ERVK-7P63135 1459 aa38.44■■■■□ 3.74
PMS1-214ENST00000446877 MYOM3Q5VTT5 1437 aa38.44■■■■□ 3.74
PMS1-214ENST00000446877 ZC3H13Q5T200 1668 aaKnown RBP38.41■■■■□ 3.74
PMS1-214ENST00000446877 MAP3K1Q13233 1512 aa38.39■■■■□ 3.74
PMS1-214ENST00000446877 EIF2AK4Q9P2K8 1649 aaKnown RBP38.39■■■■□ 3.74
PMS1-214ENST00000446877 IQGAP1P46940 1657 aa38.38■■■■□ 3.73
PMS1-214ENST00000446877 DUOX2Q9NRD8 1548 aa38.35■■■■□ 3.73
PMS1-214ENST00000446877 MED1Q15648 1581 aaPredicted RBP38.34■■■■□ 3.73
PMS1-214ENST00000446877 TXNDC2Q86VQ3 553 aa38.33■■■■□ 3.73
PMS1-214ENST00000446877 PHF23Q9BUL5 403 aaPredicted RBP38.33■■■■□ 3.73
PMS1-214ENST00000446877 RRP7BPQ9NSQ0 103 aa38.33■■■■□ 3.73
PMS1-214ENST00000446877 KIF15Q9NS87 1388 aa38.32■■■■□ 3.73
PMS1-214ENST00000446877 LRRC7Q96NW7 1537 aa38.31■■■■□ 3.72
PMS1-214ENST00000446877 APLP2Q06481 763 aa38.3■■■■□ 3.72
PMS1-214ENST00000446877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.3■■■■□ 3.724e-6■□□□□ 11.1
PMS1-214ENST00000446877 SENP3Q9H4L4 574 aaPredicted RBP38.3■■■■□ 3.72
PMS1-214ENST00000446877 EID1Q9Y6B2 187 aa38.3■■■■□ 3.72
PMS1-214ENST00000446877 MROH1Q8NDA8 1641 aa38.3■■■■□ 3.72
PMS1-214ENST00000446877 SCAF11Q99590 1463 aaKnown RBP38.28■■■■□ 3.72
PMS1-214ENST00000446877 LTKP29376 864 aa38.27■■■■□ 3.72
PMS1-214ENST00000446877 ARHGAP31Q2M1Z3 1444 aa38.26■■■■□ 3.72
PMS1-214ENST00000446877 STAG3Q9UJ98 1225 aa38.24■■■■□ 3.71
PMS1-214ENST00000446877 ALKQ9UM73 1620 aa38.23■■■■□ 3.71
PMS1-214ENST00000446877 ERBINQ96RT1 1412 aa38.23■■■■□ 3.71
PMS1-214ENST00000446877 ABCC5O15440 1437 aa38.22■■■■□ 3.71
PMS1-214ENST00000446877 CEP152O94986 1710 aa38.22■■■■□ 3.71
PMS1-214ENST00000446877 KANK1Q14678 1352 aa38.21■■■■□ 3.71
PMS1-214ENST00000446877 UBR1Q8IWV7 1749 aa38.2■■■■□ 3.71
PMS1-214ENST00000446877 SYNMO15061 1565 aa38.18■■■■□ 3.7
PMS1-214ENST00000446877 CFAP65Q6ZU64 1925 aaKnown RBP38.18■■■■□ 3.7
PMS1-214ENST00000446877 ARHGAP23Q9P227 1491 aa38.17■■■■□ 3.7
PMS1-214ENST00000446877 SLIT1O75093 1534 aa38.17■■■■□ 3.7
PMS1-214ENST00000446877 STRCP1A6NGW2 1772 aa38.16■■■■□ 3.7
PMS1-214ENST00000446877 PRDM15P57071 1507 aaPredicted RBP38.16■■■■□ 3.7
PMS1-214ENST00000446877 TMEM2Q9UHN6 1383 aa38.11■■■■□ 3.69
PMS1-214ENST00000446877 CHIC2Q9UKJ5 165 aa38.11■■■■□ 3.69
PMS1-214ENST00000446877 DAPK1P53355 1430 aa38.11■■■■□ 3.69
PMS1-214ENST00000446877 PTPN23Q9H3S7 1636 aa38.09■■■■□ 3.69
PMS1-214ENST00000446877 ANKRD30AQ9BXX3 1397 aa38.08■■■■□ 3.69
PMS1-214ENST00000446877 IDI1Q13907 227 aa38.07■■■■□ 3.68
PMS1-214ENST00000446877 FGD6Q6ZV73 1430 aa38.04■■■■□ 3.68
PMS1-214ENST00000446877 CROCC2H7BZ55 1655 aa38.01■■■■□ 3.68
PMS1-214ENST00000446877 PIK3C2BO00750 1634 aa38■■■■□ 3.67
PMS1-214ENST00000446877 KCNA6P17658 529 aa37.99■■■■□ 3.67
PMS1-214ENST00000446877 EFCAB6Q5THR3 1501 aa37.97■■■■□ 3.67
PMS1-214ENST00000446877 SLC26A8Q96RN1 970 aa37.97■■■■□ 3.67
PMS1-214ENST00000446877 LMTK2Q8IWU2 1503 aa37.96■■■■□ 3.67
PMS1-214ENST00000446877 TMEM94Q12767 1356 aa37.95■■■■□ 3.67
PMS1-214ENST00000446877 PROSER2Q86WR7 435 aaPredicted RBP37.94■■■■□ 3.66
PMS1-214ENST00000446877 BCANQ96GW7 911 aa37.94■■■■□ 3.66
PMS1-214ENST00000446877 SLC52A1Q9NWF4 448 aa37.94■■■■□ 3.66
PMS1-214ENST00000446877 FAM135BQ49AJ0 1406 aa37.93■■■■□ 3.66
PMS1-214ENST00000446877 NOS1P29475 1434 aa37.87■■■■□ 3.65
PMS1-214ENST00000446877 FAM50AQ14320 339 aaKnown RBP37.86■■■■□ 3.65
PMS1-214ENST00000446877 RBM33Q96EV2 1170 aaKnown RBP37.86■■■■□ 3.65
PMS1-214ENST00000446877 KDM5AP29375 1690 aaKnown RBP37.85■■■■□ 3.65
PMS1-214ENST00000446877 RGS17Q9UGC6 210 aaPredicted RBP37.84■■■■□ 3.65
PMS1-214ENST00000446877 XIRP1Q702N8 1843 aaKnown RBP37.82■■■■□ 3.64
PMS1-214ENST00000446877 TET3O43151 1660 aa37.81■■■■□ 3.64
PMS1-214ENST00000446877 HDGFP51858 240 aaKnown RBP37.8■■■■□ 3.64
PMS1-214ENST00000446877 ADGRB3O60242 1522 aa37.78■■■■□ 3.64
PMS1-214ENST00000446877 ADGRL2O95490 1459 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms