RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
PTPRE-203ENST00000442830 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
PTPRE-203ENST00000442830 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
PTPRE-203ENST00000442830 PZPP20742 1482 aa21.89■■□□□ 1.09
PTPRE-203ENST00000442830 KIF3BO15066 747 aa21.88■■□□□ 1.09
PTPRE-203ENST00000442830 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
PTPRE-203ENST00000442830 DNMT1P26358 1616 aaKnown RBP21.86■■□□□ 1.09
PTPRE-203ENST00000442830 POLR1AO95602 1720 aaPredicted RBP21.86■■□□□ 1.09
PTPRE-203ENST00000442830 ZC3H13Q5T200 1668 aaKnown RBP21.85■■□□□ 1.09
PTPRE-203ENST00000442830 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
PTPRE-203ENST00000442830 MIA2Q96PC5 1412 aa21.84■■□□□ 1.09
PTPRE-203ENST00000442830 TNRQ92752 1358 aa21.84■■□□□ 1.09
PTPRE-203ENST00000442830 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
PTPRE-203ENST00000442830 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
PTPRE-203ENST00000442830 WASHC2CQ9Y4E1 1318 aa21.83■■□□□ 1.09
PTPRE-203ENST00000442830 NLRP1Q9C000 1473 aa21.82■■□□□ 1.08
PTPRE-203ENST00000442830 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
PTPRE-203ENST00000442830 ZNF335Q9H4Z2 1342 aaPredicted RBP21.77■■□□□ 1.07
PTPRE-203ENST00000442830 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
PTPRE-203ENST00000442830 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
PTPRE-203ENST00000442830 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
PTPRE-203ENST00000442830 CPS1P31327 1500 aa21.74■■□□□ 1.07
PTPRE-203ENST00000442830 DUOX2Q9NRD8 1548 aa21.74■■□□□ 1.07
PTPRE-203ENST00000442830 ABCC3O15438 1527 aa21.73■■□□□ 1.07
PTPRE-203ENST00000442830 APLP2Q06481 763 aa21.72■■□□□ 1.07
PTPRE-203ENST00000442830 FBXO31Q5XUX0 539 aaPredicted RBP21.72■■□□□ 1.07
PTPRE-203ENST00000442830 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
PTPRE-203ENST00000442830 NEURL4Q96JN8 1562 aa21.72■■□□□ 1.07
PTPRE-203ENST00000442830 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
PTPRE-203ENST00000442830 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
PTPRE-203ENST00000442830 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
PTPRE-203ENST00000442830 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
PTPRE-203ENST00000442830 DISP3Q9P2K9 1392 aa21.71■■□□□ 1.07
PTPRE-203ENST00000442830 UBAP1LF5GYI3 381 aa21.68■■□□□ 1.06
PTPRE-203ENST00000442830 MED14O60244 1454 aa21.68■■□□□ 1.06
PTPRE-203ENST00000442830 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
PTPRE-203ENST00000442830 ERBINQ96RT1 1412 aa21.67■■□□□ 1.06
PTPRE-203ENST00000442830 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
PTPRE-203ENST00000442830 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
PTPRE-203ENST00000442830 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
PTPRE-203ENST00000442830 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
PTPRE-203ENST00000442830 CEP152O94986 1710 aa21.66■■□□□ 1.06
PTPRE-203ENST00000442830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.65■■□□□ 1.06
PTPRE-203ENST00000442830 IQGAP1P46940 1657 aa21.65■■□□□ 1.06
PTPRE-203ENST00000442830 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
PTPRE-203ENST00000442830 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
PTPRE-203ENST00000442830 KIF15Q9NS87 1388 aa21.62■■□□□ 1.05
PTPRE-203ENST00000442830 ARHGAP31Q2M1Z3 1444 aa21.62■■□□□ 1.05
PTPRE-203ENST00000442830 TOM1O60784 492 aa21.6■■□□□ 1.05
PTPRE-203ENST00000442830 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
PTPRE-203ENST00000442830 VWDEQ8N2E2 1590 aa21.6■■□□□ 1.05
PTPRE-203ENST00000442830 ABCC5O15440 1437 aa21.59■■□□□ 1.05
PTPRE-203ENST00000442830 UBR1Q8IWV7 1749 aa21.59■■□□□ 1.05
PTPRE-203ENST00000442830 DAPK1P53355 1430 aa21.58■■□□□ 1.05
PTPRE-203ENST00000442830 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.05
PTPRE-203ENST00000442830 KANK1Q14678 1352 aa21.58■■□□□ 1.04
PTPRE-203ENST00000442830 SYNMO15061 1565 aa21.57■■□□□ 1.04
PTPRE-203ENST00000442830 ANKRD30AQ9BXX3 1397 aa21.55■■□□□ 1.04
PTPRE-203ENST00000442830 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
PTPRE-203ENST00000442830 SCAF11Q99590 1463 aaKnown RBP21.53■■□□□ 1.04
PTPRE-203ENST00000442830 SLIT1O75093 1534 aa21.53■■□□□ 1.04
PTPRE-203ENST00000442830 LMTK2Q8IWU2 1503 aa21.51■■□□□ 1.03
PTPRE-203ENST00000442830 SOCS7O14512 581 aa21.51■■□□□ 1.03
PTPRE-203ENST00000442830 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
PTPRE-203ENST00000442830 ARHGAP23Q9P227 1491 aa21.5■■□□□ 1.03
PTPRE-203ENST00000442830 EID1Q9Y6B2 187 aa21.48■■□□□ 1.03
PTPRE-203ENST00000442830 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
PTPRE-203ENST00000442830 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
PTPRE-203ENST00000442830 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
PTPRE-203ENST00000442830 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
PTPRE-203ENST00000442830 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
PTPRE-203ENST00000442830 PIP4K2BP78356 416 aa21.44■■□□□ 1.02
PTPRE-203ENST00000442830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.02
PTPRE-203ENST00000442830 LRRC7Q96NW7 1537 aa21.44■■□□□ 1.02
PTPRE-203ENST00000442830 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
PTPRE-203ENST00000442830 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
PTPRE-203ENST00000442830 EFCAB6Q5THR3 1501 aa21.43■■□□□ 1.02
PTPRE-203ENST00000442830 PHF23Q9BUL5 403 aaPredicted RBP21.42■■□□□ 1.02
PTPRE-203ENST00000442830 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
PTPRE-203ENST00000442830 TMEM2Q9UHN6 1383 aa21.41■■□□□ 1.02
PTPRE-203ENST00000442830 HSPA1LP34931 641 aa21.41■■□□□ 1.02
PTPRE-203ENST00000442830 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
PTPRE-203ENST00000442830 MED1Q15648 1581 aaPredicted RBP21.38■■□□□ 1.01
PTPRE-203ENST00000442830 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
PTPRE-203ENST00000442830 LTKP29376 864 aa21.37■■□□□ 1.01
PTPRE-203ENST00000442830 ADGRB3O60242 1522 aa21.37■■□□□ 1.01
PTPRE-203ENST00000442830 NOS1P29475 1434 aa21.37■■□□□ 1.01
PTPRE-203ENST00000442830 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
PTPRE-203ENST00000442830 ANKRD50Q9ULJ7 1429 aa21.36■■□□□ 1.01
PTPRE-203ENST00000442830 TET3O43151 1660 aa21.34■■□□□ 1.01
PTPRE-203ENST00000442830 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
PTPRE-203ENST00000442830 IDI1Q13907 227 aa21.33■■□□□ 1.01
PTPRE-203ENST00000442830 GCC2Q8IWJ2 1684 aa21.33■■□□□ 1
PTPRE-203ENST00000442830 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
PTPRE-203ENST00000442830 UNC13BO14795 1591 aa21.29■■□□□ 1
PTPRE-203ENST00000442830 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
PTPRE-203ENST00000442830 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
PTPRE-203ENST00000442830 ROCK1Q13464 1354 aa21.27■■□□□ 1
PTPRE-203ENST00000442830 KCNA6P17658 529 aa21.26■□□□□ 0.99
PTPRE-203ENST00000442830 NWD1Q149M9 1564 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms