RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
VTI1A-202ENST00000432306 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
VTI1A-202ENST00000432306 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
VTI1A-202ENST00000432306 IGSF3O75054 1194 aa11.24□□□□□ -0.61
VTI1A-202ENST00000432306 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
VTI1A-202ENST00000432306 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
VTI1A-202ENST00000432306 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
VTI1A-202ENST00000432306 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
VTI1A-202ENST00000432306 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
VTI1A-202ENST00000432306 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
VTI1A-202ENST00000432306 FANCIQ9NVI1 1328 aa11.22□□□□□ -0.61
VTI1A-202ENST00000432306 NEO1Q92859 1461 aa11.22□□□□□ -0.61
VTI1A-202ENST00000432306 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
VTI1A-202ENST00000432306 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
VTI1A-202ENST00000432306 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.62
VTI1A-202ENST00000432306 CHMP4AQ9BY43 222 aa11.21□□□□□ -0.62
VTI1A-202ENST00000432306 ZMYND15Q9H091 742 aa11.21□□□□□ -0.62
VTI1A-202ENST00000432306 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
VTI1A-202ENST00000432306 RGL2O15211 777 aa11.2□□□□□ -0.62
VTI1A-202ENST00000432306 RAPGEF3O95398 923 aa11.19□□□□□ -0.62
VTI1A-202ENST00000432306 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
VTI1A-202ENST00000432306 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
VTI1A-202ENST00000432306 NEFLP07196 543 aa11.18□□□□□ -0.62
VTI1A-202ENST00000432306 FRMPD1Q5SYB0 1578 aa11.18□□□□□ -0.62
VTI1A-202ENST00000432306 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
VTI1A-202ENST00000432306 ARHGEF40Q8TER5 1519 aa11.18□□□□□ -0.62
VTI1A-202ENST00000432306 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
VTI1A-202ENST00000432306 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
VTI1A-202ENST00000432306 ATP10BO94823 1461 aa11.17□□□□□ -0.62
VTI1A-202ENST00000432306 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
VTI1A-202ENST00000432306 POGZQ7Z3K3 1410 aa11.16□□□□□ -0.62
VTI1A-202ENST00000432306 SOCS7O14512 581 aa11.15□□□□□ -0.62
VTI1A-202ENST00000432306 PRR29P0C7W0 189 aa11.15□□□□□ -0.62
VTI1A-202ENST00000432306 RICTORQ6R327 1708 aa11.15□□□□□ -0.62
VTI1A-202ENST00000432306 ARID3AQ99856 593 aa11.15□□□□□ -0.63
VTI1A-202ENST00000432306 DISP3Q9P2K9 1392 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 FANCAO15360 1455 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 ARID3CA6NKF2 412 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 NUBP1P53384 320 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 HSPA2P54652 639 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 CFAP74Q9C0B2 1584 aa11.14□□□□□ -0.63
VTI1A-202ENST00000432306 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
VTI1A-202ENST00000432306 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
VTI1A-202ENST00000432306 DDX10Q13206 875 aaKnown RBP11.13□□□□□ -0.63
VTI1A-202ENST00000432306 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
VTI1A-202ENST00000432306 ANP32CO43423 234 aa11.12□□□□□ -0.63
VTI1A-202ENST00000432306 MNX1P50219 401 aaPredicted RBP11.12□□□□□ -0.63
VTI1A-202ENST00000432306 DENND4BO75064 1496 aaPredicted RBP11.12□□□□□ -0.63
VTI1A-202ENST00000432306 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
VTI1A-202ENST00000432306 EFCAB5A4FU69 1503 aa11.1□□□□□ -0.63
VTI1A-202ENST00000432306 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
VTI1A-202ENST00000432306 PREX1Q8TCU6 1659 aa11.1□□□□□ -0.63
VTI1A-202ENST00000432306 FHOD3Q2V2M9 1422 aa11.1□□□□□ -0.63
VTI1A-202ENST00000432306 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
VTI1A-202ENST00000432306 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
VTI1A-202ENST00000432306 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
VTI1A-202ENST00000432306 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
VTI1A-202ENST00000432306 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
VTI1A-202ENST00000432306 SAMD9Q5K651 1589 aa11.08□□□□□ -0.64
VTI1A-202ENST00000432306 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
VTI1A-202ENST00000432306 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
VTI1A-202ENST00000432306 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
VTI1A-202ENST00000432306 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
VTI1A-202ENST00000432306 HFM1A2PYH4 1435 aa11.06□□□□□ -0.64
VTI1A-202ENST00000432306 SIN3AQ96ST3 1273 aa11.06□□□□□ -0.64
VTI1A-202ENST00000432306 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
VTI1A-202ENST00000432306 BRD2P25440 801 aaKnown RBP11.05□□□□□ -0.64
VTI1A-202ENST00000432306 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 PLEKHD1A6NEE1 506 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 GSE1Q14687 1217 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 NUP153P49790 1475 aaKnown RBP11.04□□□□□ -0.64
VTI1A-202ENST00000432306 NCOA2Q15596 1464 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 MLECQ14165 292 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
VTI1A-202ENST00000432306 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
VTI1A-202ENST00000432306 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-202ENST00000432306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.02□□□□□ -0.64
VTI1A-202ENST00000432306 ARHGEF12Q9NZN5 1544 aa11.02□□□□□ -0.64
VTI1A-202ENST00000432306 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
VTI1A-202ENST00000432306 TRIM52Q96A61 297 aa11.01□□□□□ -0.65
VTI1A-202ENST00000432306 C1orf115Q9H7X2 142 aa11.01□□□□□ -0.65
VTI1A-202ENST00000432306 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
VTI1A-202ENST00000432306 FGD6Q6ZV73 1430 aa11□□□□□ -0.65
VTI1A-202ENST00000432306 TONSLQ96HA7 1378 aa11□□□□□ -0.65
VTI1A-202ENST00000432306 PPP4R2Q9NY27 417 aa11□□□□□ -0.65
VTI1A-202ENST00000432306 ATP10AO60312 1499 aa11□□□□□ -0.65
VTI1A-202ENST00000432306 C9orf84Q5VXU9 1444 aa10.99□□□□□ -0.65
VTI1A-202ENST00000432306 UHRF1BP1Q6BDS2 1440 aa10.99□□□□□ -0.65
VTI1A-202ENST00000432306 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
VTI1A-202ENST00000432306 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 ITGAEP38570 1179 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 IQSEC2Q5JU85 1478 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 PTPRTO14522 1441 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
VTI1A-202ENST00000432306 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
VTI1A-202ENST00000432306 FAM212AQ96EL1 285 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms