RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CEP162Q5TB80 1403 aa25.26■■□□□ 1.63
RPUSD3-204ENST00000424438 PHF23Q9BUL5 403 aaPredicted RBP25.25■■□□□ 1.63
RPUSD3-204ENST00000424438 PIP4K2BP78356 416 aa25.24■■□□□ 1.63
RPUSD3-204ENST00000424438 POLR1AO95602 1720 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-204ENST00000424438 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-204ENST00000424438 TOM1O60784 492 aa25.23■■□□□ 1.63
RPUSD3-204ENST00000424438 CPS1P31327 1500 aa25.21■■□□□ 1.63
RPUSD3-204ENST00000424438 PZPP20742 1482 aa25.21■■□□□ 1.63
RPUSD3-204ENST00000424438 KDM5DQ9BY66 1539 aa25.2■■□□□ 1.62
RPUSD3-204ENST00000424438 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
RPUSD3-204ENST00000424438 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
RPUSD3-204ENST00000424438 ZNF644Q9H582 1327 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-204ENST00000424438 CCDC141Q6ZP82 1450 aa25.17■■□□□ 1.62
RPUSD3-204ENST00000424438 TNRQ92752 1358 aa25.17■■□□□ 1.62
RPUSD3-204ENST00000424438 NLRP1Q9C000 1473 aa25.14■■□□□ 1.61
RPUSD3-204ENST00000424438 SHANK2Q9UPX8 1470 aa25.13■■□□□ 1.61
RPUSD3-204ENST00000424438 DEPDC5O75140 1603 aa25.12■■□□□ 1.61
RPUSD3-204ENST00000424438 MED14O60244 1454 aa25.12■■□□□ 1.61
RPUSD3-204ENST00000424438 ARHGEF5Q12774 1597 aa25.11■■□□□ 1.61
RPUSD3-204ENST00000424438 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
RPUSD3-204ENST00000424438 KIF3BO15066 747 aa25.09■■□□□ 1.61
RPUSD3-204ENST00000424438 MIA2Q96PC5 1412 aa25.09■■□□□ 1.61
RPUSD3-204ENST00000424438 NCOA2Q15596 1464 aa25.08■■□□□ 1.6
RPUSD3-204ENST00000424438 VWDEQ8N2E2 1590 aa25.07■■□□□ 1.6
RPUSD3-204ENST00000424438 ANKLE2Q86XL3 938 aa25.06■■□□□ 1.6
RPUSD3-204ENST00000424438 THEMISQ8N1K5 641 aaPredicted RBP25.06■■□□□ 1.6
RPUSD3-204ENST00000424438 RNF17Q9BXT8 1623 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-204ENST00000424438 FBXO31Q5XUX0 539 aaPredicted RBP25.05■■□□□ 1.6
RPUSD3-204ENST00000424438 WASHC2CQ9Y4E1 1318 aa25.05■■□□□ 1.6
RPUSD3-204ENST00000424438 UGGT1Q9NYU2 1555 aa25.05■■□□□ 1.6
RPUSD3-204ENST00000424438 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
RPUSD3-204ENST00000424438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.01■■□□□ 1.59
RPUSD3-204ENST00000424438 NPHP4O75161 1426 aaPredicted RBP25.01■■□□□ 1.59
RPUSD3-204ENST00000424438 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
RPUSD3-204ENST00000424438 EIF2AK4Q9P2K8 1649 aaKnown RBP25■■□□□ 1.59
RPUSD3-204ENST00000424438 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
RPUSD3-204ENST00000424438 ALKQ9UM73 1620 aa24.97■■□□□ 1.59
RPUSD3-204ENST00000424438 TSPY4P0CV99 314 aa24.96■■□□□ 1.59
RPUSD3-204ENST00000424438 TSPY10P0CW01 314 aa24.96■■□□□ 1.59
RPUSD3-204ENST00000424438 SYNMO15061 1565 aa24.96■■□□□ 1.59
RPUSD3-204ENST00000424438 ABCC3O15438 1527 aa24.96■■□□□ 1.59
RPUSD3-204ENST00000424438 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
RPUSD3-204ENST00000424438 ERVK-7P63135 1459 aa24.91■■□□□ 1.58
RPUSD3-204ENST00000424438 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
RPUSD3-204ENST00000424438 STRCP1A6NGW2 1772 aa24.89■■□□□ 1.57
RPUSD3-204ENST00000424438 LRRC7Q96NW7 1537 aa24.88■■□□□ 1.57
RPUSD3-204ENST00000424438 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
RPUSD3-204ENST00000424438 MAP3K1Q13233 1512 aa24.86■■□□□ 1.57
RPUSD3-204ENST00000424438 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
RPUSD3-204ENST00000424438 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
RPUSD3-204ENST00000424438 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.57
RPUSD3-204ENST00000424438 SLIT1O75093 1534 aa24.83■■□□□ 1.57
RPUSD3-204ENST00000424438 DUOX2Q9NRD8 1548 aa24.83■■□□□ 1.57
RPUSD3-204ENST00000424438 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
RPUSD3-204ENST00000424438 SCAF11Q99590 1463 aaKnown RBP24.82■■□□□ 1.56
RPUSD3-204ENST00000424438 CEP152O94986 1710 aa24.81■■□□□ 1.56
RPUSD3-204ENST00000424438 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
RPUSD3-204ENST00000424438 MYOM3Q5VTT5 1437 aa24.79■■□□□ 1.56
RPUSD3-204ENST00000424438 KDM5AP29375 1690 aaKnown RBP24.76■■□□□ 1.55
RPUSD3-204ENST00000424438 RGS17Q9UGC6 210 aaPredicted RBP24.76■■□□□ 1.55
RPUSD3-204ENST00000424438 CFAP65Q6ZU64 1925 aaKnown RBP24.75■■□□□ 1.55
RPUSD3-204ENST00000424438 ERBINQ96RT1 1412 aa24.75■■□□□ 1.55
RPUSD3-204ENST00000424438 XIRP1Q702N8 1843 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-204ENST00000424438 CROCC2H7BZ55 1655 aa24.71■■□□□ 1.55
RPUSD3-204ENST00000424438 LTKP29376 864 aa24.68■■□□□ 1.54
RPUSD3-204ENST00000424438 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
RPUSD3-204ENST00000424438 TXNDC2Q86VQ3 553 aa24.67■■□□□ 1.54
RPUSD3-204ENST00000424438 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
RPUSD3-204ENST00000424438 FAM135BQ49AJ0 1406 aa24.66■■□□□ 1.54
RPUSD3-204ENST00000424438 TMEM2Q9UHN6 1383 aa24.66■■□□□ 1.54
RPUSD3-204ENST00000424438 LMTK2Q8IWU2 1503 aa24.66■■□□□ 1.54
RPUSD3-204ENST00000424438 PIK3C2BO00750 1634 aa24.65■■□□□ 1.54
RPUSD3-204ENST00000424438 ABCC5O15440 1437 aa24.63■■□□□ 1.53
RPUSD3-204ENST00000424438 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
RPUSD3-204ENST00000424438 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
RPUSD3-204ENST00000424438 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
RPUSD3-204ENST00000424438 KANK1Q14678 1352 aa24.6■■□□□ 1.53
RPUSD3-204ENST00000424438 PTPN23Q9H3S7 1636 aa24.6■■□□□ 1.53
RPUSD3-204ENST00000424438 TET3O43151 1660 aa24.59■■□□□ 1.53
RPUSD3-204ENST00000424438 DAPK1P53355 1430 aa24.57■■□□□ 1.52
RPUSD3-204ENST00000424438 NWD1Q149M9 1564 aa24.55■■□□□ 1.52
RPUSD3-204ENST00000424438 KCNA6P17658 529 aa24.55■■□□□ 1.52
RPUSD3-204ENST00000424438 NKTRP30414 1462 aaKnown RBP24.55■■□□□ 1.52
RPUSD3-204ENST00000424438 NOS1P29475 1434 aa24.54■■□□□ 1.52
RPUSD3-204ENST00000424438 TMEM94Q12767 1356 aa24.54■■□□□ 1.52
RPUSD3-204ENST00000424438 RRP7BPQ9NSQ0 103 aa24.52■■□□□ 1.52
RPUSD3-204ENST00000424438 ANKRD30AQ9BXX3 1397 aa24.52■■□□□ 1.52
RPUSD3-204ENST00000424438 ADGRB3O60242 1522 aa24.51■■□□□ 1.51
RPUSD3-204ENST00000424438 IDI1Q13907 227 aa24.51■■□□□ 1.51
RPUSD3-204ENST00000424438 FGD6Q6ZV73 1430 aa24.51■■□□□ 1.51
RPUSD3-204ENST00000424438 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
RPUSD3-204ENST00000424438 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
RPUSD3-204ENST00000424438 RPRD2Q5VT52 1461 aaKnown RBP24.49■■□□□ 1.51
RPUSD3-204ENST00000424438 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
RPUSD3-204ENST00000424438 ADGRL2O95490 1459 aa24.46■■□□□ 1.51
RPUSD3-204ENST00000424438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
RPUSD3-204ENST00000424438 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
RPUSD3-204ENST00000424438 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
RPUSD3-204ENST00000424438 ZFYVE9O95405 1425 aa24.41■■□□□ 1.5
RPUSD3-204ENST00000424438 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms