RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 FAM135AQ9P2D6 1515 aa25.27■■□□□ 1.64
SLC13A3-206ENST00000420568 ABCC5O15440 1437 aa25.27■■□□□ 1.64
SLC13A3-206ENST00000420568 KDM5DQ9BY66 1539 aa25.26■■□□□ 1.63
SLC13A3-206ENST00000420568 FGD6Q6ZV73 1430 aa25.24■■□□□ 1.63
SLC13A3-206ENST00000420568 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
SLC13A3-206ENST00000420568 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
SLC13A3-206ENST00000420568 PZPP20742 1482 aa25.22■■□□□ 1.63
SLC13A3-206ENST00000420568 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
SLC13A3-206ENST00000420568 TNRQ92752 1358 aa25.21■■□□□ 1.63
SLC13A3-206ENST00000420568 PKD2Q13563 968 aa25.21■■□□□ 1.63
SLC13A3-206ENST00000420568 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.62
SLC13A3-206ENST00000420568 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
SLC13A3-206ENST00000420568 SHANK2Q9UPX8 1470 aa25.2■■□□□ 1.62
SLC13A3-206ENST00000420568 MYO3AQ8NEV4 1616 aa25.19■■□□□ 1.62
SLC13A3-206ENST00000420568 CEP170BQ9Y4F5 1589 aaPredicted RBP25.19■■□□□ 1.62
SLC13A3-206ENST00000420568 A2ML1A8K2U0 1454 aa25.19■■□□□ 1.62
SLC13A3-206ENST00000420568 PLA2R1Q13018 1463 aa25.19■■□□□ 1.62
SLC13A3-206ENST00000420568 DAPK1P53355 1430 aa25.19■■□□□ 1.62
SLC13A3-206ENST00000420568 KIF15Q9NS87 1388 aa25.18■■□□□ 1.62
SLC13A3-206ENST00000420568 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
SLC13A3-206ENST00000420568 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
SLC13A3-206ENST00000420568 ZNF142P52746 1687 aaPredicted RBP25.15■■□□□ 1.62
SLC13A3-206ENST00000420568 EIF2AK4Q9P2K8 1649 aaKnown RBP25.14■■□□□ 1.61
SLC13A3-206ENST00000420568 ABCC3O15438 1527 aa25.13■■□□□ 1.61
SLC13A3-206ENST00000420568 CHIC2Q9UKJ5 165 aa25.13■■□□□ 1.61
SLC13A3-206ENST00000420568 ERBINQ96RT1 1412 aa25.12■■□□□ 1.61
SLC13A3-206ENST00000420568 ANKRD30AQ9BXX3 1397 aa25.1■■□□□ 1.61
SLC13A3-206ENST00000420568 THEMISQ8N1K5 641 aaPredicted RBP25.1■■□□□ 1.61
SLC13A3-206ENST00000420568 DNMT1P26358 1616 aaKnown RBP25.1■■□□□ 1.61
SLC13A3-206ENST00000420568 MROH1Q8NDA8 1641 aa25.09■■□□□ 1.61
SLC13A3-206ENST00000420568 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
SLC13A3-206ENST00000420568 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
SLC13A3-206ENST00000420568 LTBP4Q8N2S1 1624 aa25.08■■□□□ 1.6
SLC13A3-206ENST00000420568 CROCC2H7BZ55 1655 aa25.06■■□□□ 1.6
SLC13A3-206ENST00000420568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.05■■□□□ 1.64e-12■■□□□ 12.6
SLC13A3-206ENST00000420568 ZC3H13Q5T200 1668 aaKnown RBP25.04■■□□□ 1.6
SLC13A3-206ENST00000420568 ANKLE2Q86XL3 938 aa25.04■■□□□ 1.6
SLC13A3-206ENST00000420568 ZNF335Q9H4Z2 1342 aaPredicted RBP25.04■■□□□ 1.6
SLC13A3-206ENST00000420568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.04■■□□□ 1.6
SLC13A3-206ENST00000420568 SPATA31D1Q6ZQQ2 1576 aa25.03■■□□□ 1.6
SLC13A3-206ENST00000420568 ARHGAP31Q2M1Z3 1444 aa25.03■■□□□ 1.6
SLC13A3-206ENST00000420568 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
SLC13A3-206ENST00000420568 PRDM15P57071 1507 aaPredicted RBP25.01■■□□□ 1.59
SLC13A3-206ENST00000420568 ADGRL2O95490 1459 aa25■■□□□ 1.59
SLC13A3-206ENST00000420568 UGGT1Q9NYU2 1555 aa25■■□□□ 1.59
SLC13A3-206ENST00000420568 KANK1Q14678 1352 aa24.99■■□□□ 1.59
SLC13A3-206ENST00000420568 IQSEC2Q5JU85 1478 aa24.97■■□□□ 1.59
SLC13A3-206ENST00000420568 DEPDC5O75140 1603 aa24.94■■□□□ 1.58
SLC13A3-206ENST00000420568 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
SLC13A3-206ENST00000420568 CEP152O94986 1710 aa24.92■■□□□ 1.58
SLC13A3-206ENST00000420568 LMTK2Q8IWU2 1503 aa24.92■■□□□ 1.58
SLC13A3-206ENST00000420568 MED14O60244 1454 aa24.92■■□□□ 1.58
SLC13A3-206ENST00000420568 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
SLC13A3-206ENST00000420568 VWDEQ8N2E2 1590 aa24.9■■□□□ 1.58
SLC13A3-206ENST00000420568 NPHP4O75161 1426 aaPredicted RBP24.9■■□□□ 1.58
SLC13A3-206ENST00000420568 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
SLC13A3-206ENST00000420568 ROCK1Q13464 1354 aa24.85■■□□□ 1.57
SLC13A3-206ENST00000420568 IDI1Q13907 227 aa24.85■■□□□ 1.57
SLC13A3-206ENST00000420568 LTKP29376 864 aa24.84■■□□□ 1.57
SLC13A3-206ENST00000420568 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.57
SLC13A3-206ENST00000420568 TXNDC2Q86VQ3 553 aa24.83■■□□□ 1.57
SLC13A3-206ENST00000420568 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
SLC13A3-206ENST00000420568 ARHGAP23Q9P227 1491 aa24.82■■□□□ 1.56
SLC13A3-206ENST00000420568 NOS1P29475 1434 aa24.81■■□□□ 1.56
SLC13A3-206ENST00000420568 SLC52A1Q9NWF4 448 aa24.8■■□□□ 1.56
SLC13A3-206ENST00000420568 STAG3Q9UJ98 1225 aa24.8■■□□□ 1.56
SLC13A3-206ENST00000420568 SLIT1O75093 1534 aa24.8■■□□□ 1.56
SLC13A3-206ENST00000420568 CPS1P31327 1500 aa24.8■■□□□ 1.56
SLC13A3-206ENST00000420568 UBR1Q8IWV7 1749 aa24.79■■□□□ 1.56
SLC13A3-206ENST00000420568 EID1Q9Y6B2 187 aa24.79■■□□□ 1.56
SLC13A3-206ENST00000420568 CFAP65Q6ZU64 1925 aaKnown RBP24.78■■□□□ 1.56
SLC13A3-206ENST00000420568 SCAF11Q99590 1463 aaKnown RBP24.78■■□□□ 1.56
SLC13A3-206ENST00000420568 EFCAB6Q5THR3 1501 aa24.78■■□□□ 1.56
SLC13A3-206ENST00000420568 ITGAEP38570 1179 aa24.78■■□□□ 1.56
SLC13A3-206ENST00000420568 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
SLC13A3-206ENST00000420568 RPRD2Q5VT52 1461 aaKnown RBP24.75■■□□□ 1.55
SLC13A3-206ENST00000420568 IQGAP1P46940 1657 aa24.74■■□□□ 1.55
SLC13A3-206ENST00000420568 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
SLC13A3-206ENST00000420568 SYNMO15061 1565 aa24.72■■□□□ 1.55
SLC13A3-206ENST00000420568 TOM1O60784 492 aa24.7■■□□□ 1.54
SLC13A3-206ENST00000420568 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
SLC13A3-206ENST00000420568 NUP155O75694 1391 aa24.67■■□□□ 1.54
SLC13A3-206ENST00000420568 UNC13BO14795 1591 aa24.67■■□□□ 1.54
SLC13A3-206ENST00000420568 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
SLC13A3-206ENST00000420568 TET3O43151 1660 aa24.65■■□□□ 1.54
SLC13A3-206ENST00000420568 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
SLC13A3-206ENST00000420568 ADGRB3O60242 1522 aa24.63■■□□□ 1.53
SLC13A3-206ENST00000420568 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
SLC13A3-206ENST00000420568 HDGFP51858 240 aaKnown RBP24.6■■□□□ 1.53
SLC13A3-206ENST00000420568 SLC26A8Q96RN1 970 aa24.6■■□□□ 1.53
SLC13A3-206ENST00000420568 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
SLC13A3-206ENST00000420568 IQGAP3Q86VI3 1631 aa24.58■■□□□ 1.53
SLC13A3-206ENST00000420568 STRCP1A6NGW2 1772 aa24.58■■□□□ 1.53
SLC13A3-206ENST00000420568 KCNA6P17658 529 aa24.58■■□□□ 1.53
SLC13A3-206ENST00000420568 ZFYVE9O95405 1425 aa24.57■■□□□ 1.52
SLC13A3-206ENST00000420568 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
SLC13A3-206ENST00000420568 HSPA1LP34931 641 aa24.56■■□□□ 1.52
SLC13A3-206ENST00000420568 DISP3Q9P2K9 1392 aa24.55■■□□□ 1.52
SLC13A3-206ENST00000420568 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SLC13A3-206ENST00000420568 RIMS2Q9UQ26 1411 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms