RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CERKQ8TCT0 537 aa35.33■■■■□ 3.25
KDELR3-202ENST00000409006 CEP170BQ9Y4F5 1589 aaPredicted RBP35.33■■■■□ 3.25
KDELR3-202ENST00000409006 PTPN23Q9H3S7 1636 aa35.32■■■■□ 3.25
KDELR3-202ENST00000409006 PTPRTO14522 1441 aa35.32■■■■□ 3.24
KDELR3-202ENST00000409006 CROCC2H7BZ55 1655 aa35.29■■■■□ 3.24
KDELR3-202ENST00000409006 RNF17Q9BXT8 1623 aaKnown RBP35.28■■■■□ 3.24
KDELR3-202ENST00000409006 FAM135AQ9P2D6 1515 aa35.28■■■■□ 3.24
KDELR3-202ENST00000409006 FBXO31Q5XUX0 539 aaPredicted RBP35.27■■■■□ 3.24
KDELR3-202ENST00000409006 WASHC2CQ9Y4E1 1318 aa35.27■■■■□ 3.24
KDELR3-202ENST00000409006 EIF2AK4Q9P2K8 1649 aaKnown RBP35.24■■■■□ 3.23
KDELR3-202ENST00000409006 PZPP20742 1482 aa35.24■■■■□ 3.23
KDELR3-202ENST00000409006 ABCC5O15440 1437 aa35.23■■■■□ 3.23
KDELR3-202ENST00000409006 NCKAP5LQ9HCH0 1330 aa35.23■■■■□ 3.23
KDELR3-202ENST00000409006 FGD6Q6ZV73 1430 aa35.21■■■■□ 3.23
KDELR3-202ENST00000409006 DNMT1P26358 1616 aaKnown RBP35.21■■■■□ 3.23
KDELR3-202ENST00000409006 MROH1Q8NDA8 1641 aa35.21■■■■□ 3.23
KDELR3-202ENST00000409006 A2ML1A8K2U0 1454 aa35.19■■■■□ 3.22
KDELR3-202ENST00000409006 TCOF1Q13428 1488 aaKnown RBP35.19■■■■□ 3.22
KDELR3-202ENST00000409006 PLA2R1Q13018 1463 aa35.18■■■■□ 3.22
KDELR3-202ENST00000409006 DUOX2Q9NRD8 1548 aa35.17■■■■□ 3.22
KDELR3-202ENST00000409006 SHANK2Q9UPX8 1470 aa35.17■■■■□ 3.22
KDELR3-202ENST00000409006 TNRQ92752 1358 aa35.17■■■■□ 3.22
KDELR3-202ENST00000409006 ABCC3O15438 1527 aa35.16■■■■□ 3.22
KDELR3-202ENST00000409006 ZC3H13Q5T200 1668 aaKnown RBP35.16■■■■□ 3.22
KDELR3-202ENST00000409006 DAPK1P53355 1430 aa35.15■■■■□ 3.22
KDELR3-202ENST00000409006 CEP152O94986 1710 aa35.15■■■■□ 3.22
KDELR3-202ENST00000409006 LTBP4Q8N2S1 1624 aa35.15■■■■□ 3.22
KDELR3-202ENST00000409006 CFAP65Q6ZU64 1925 aaKnown RBP35.12■■■■□ 3.21
KDELR3-202ENST00000409006 KIF15Q9NS87 1388 aa35.12■■■■□ 3.21
KDELR3-202ENST00000409006 RRP7BPQ9NSQ0 103 aa35.1■■■■□ 3.21
KDELR3-202ENST00000409006 PKD2Q13563 968 aa35.08■■■■□ 3.21
KDELR3-202ENST00000409006 POLR1AO95602 1720 aaPredicted RBP35.05■■■■□ 3.2
KDELR3-202ENST00000409006 CHIC2Q9UKJ5 165 aa35.03■■■■□ 3.2
KDELR3-202ENST00000409006 ERBINQ96RT1 1412 aa35.03■■■■□ 3.2
KDELR3-202ENST00000409006 SPATA31D1Q6ZQQ2 1576 aa35.03■■■■□ 3.2
KDELR3-202ENST00000409006 NLRP1Q9C000 1473 aa35.01■■■■□ 3.19
KDELR3-202ENST00000409006 PRDM15P57071 1507 aaPredicted RBP35.01■■■■□ 3.19
KDELR3-202ENST00000409006 ZNF335Q9H4Z2 1342 aaPredicted RBP35■■■■□ 3.19
KDELR3-202ENST00000409006 DEPDC5O75140 1603 aa34.99■■■■□ 3.19
KDELR3-202ENST00000409006 NEURL4Q96JN8 1562 aa34.99■■■■□ 3.19
KDELR3-202ENST00000409006 ERVK-7P63135 1459 aa34.98■■■■□ 3.19
KDELR3-202ENST00000409006 UGGT1Q9NYU2 1555 aa34.97■■■■□ 3.19
KDELR3-202ENST00000409006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.96■■■■□ 3.19
KDELR3-202ENST00000409006 ANKRD30AQ9BXX3 1397 aa34.95■■■■□ 3.19
KDELR3-202ENST00000409006 FAM50AQ14320 339 aaKnown RBP34.93■■■■□ 3.18
KDELR3-202ENST00000409006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.92■■■■□ 3.18
KDELR3-202ENST00000409006 THEMISQ8N1K5 641 aaPredicted RBP34.91■■■■□ 3.18
KDELR3-202ENST00000409006 ADGRL2O95490 1459 aa34.89■■■■□ 3.18
KDELR3-202ENST00000409006 IQSEC2Q5JU85 1478 aa34.88■■■■□ 3.17
KDELR3-202ENST00000409006 ARHGAP31Q2M1Z3 1444 aa34.86■■■■□ 3.17
KDELR3-202ENST00000409006 UBR1Q8IWV7 1749 aa34.86■■■■□ 3.17
KDELR3-202ENST00000409006 ANKLE2Q86XL3 938 aa34.85■■■■□ 3.17
KDELR3-202ENST00000409006 VWDEQ8N2E2 1590 aa34.83■■■■□ 3.17
KDELR3-202ENST00000409006 KANK1Q14678 1352 aa34.8■■■■□ 3.16
KDELR3-202ENST00000409006 MED14O60244 1454 aa34.79■■■■□ 3.16
KDELR3-202ENST00000409006 LMTK2Q8IWU2 1503 aa34.78■■■■□ 3.16
KDELR3-202ENST00000409006 IQGAP1P46940 1657 aa34.77■■■■□ 3.16
KDELR3-202ENST00000409006 PPARGC1BQ86YN6 1023 aaKnown RBP34.77■■■■□ 3.16
KDELR3-202ENST00000409006 NPHP4O75161 1426 aaPredicted RBP34.77■■■■□ 3.16
KDELR3-202ENST00000409006 PIK3C2BO00750 1634 aa34.73■■■■□ 3.15
KDELR3-202ENST00000409006 ANKRD50Q9ULJ7 1429 aa34.72■■■■□ 3.15
KDELR3-202ENST00000409006 EFCAB6Q5THR3 1501 aa34.7■■■■□ 3.14
KDELR3-202ENST00000409006 SYNMO15061 1565 aa34.68■■■■□ 3.14
KDELR3-202ENST00000409006 STRCP1A6NGW2 1772 aa34.67■■■■□ 3.14
KDELR3-202ENST00000409006 CPS1P31327 1500 aa34.66■■■■□ 3.14
KDELR3-202ENST00000409006 SLIT1O75093 1534 aa34.65■■■■□ 3.14
KDELR3-202ENST00000409006 ARHGAP23Q9P227 1491 aa34.65■■■■□ 3.14
KDELR3-202ENST00000409006 UBAP1LF5GYI3 381 aa34.65■■■■□ 3.14
KDELR3-202ENST00000409006 LTKP29376 864 aa34.63■■■■□ 3.13
KDELR3-202ENST00000409006 SCAF11Q99590 1463 aaKnown RBP34.63■■■■□ 3.13
KDELR3-202ENST00000409006 IDI1Q13907 227 aa34.61■■■■□ 3.13
KDELR3-202ENST00000409006 NOS1P29475 1434 aa34.61■■■■□ 3.13
KDELR3-202ENST00000409006 UNC13BO14795 1591 aa34.6■■■■□ 3.13
KDELR3-202ENST00000409006 KDM5AP29375 1690 aaKnown RBP34.6■■■■□ 3.13
KDELR3-202ENST00000409006 TXNDC2Q86VQ3 553 aa34.59■■■■□ 3.13
KDELR3-202ENST00000409006 TET3O43151 1660 aa34.59■■■■□ 3.13
KDELR3-202ENST00000409006 ROCK1Q13464 1354 aa34.58■■■■□ 3.13
KDELR3-202ENST00000409006 ITGAEP38570 1179 aa34.56■■■■□ 3.12
KDELR3-202ENST00000409006 GCC2Q8IWJ2 1684 aa34.55■■■■□ 3.12
KDELR3-202ENST00000409006 TMEM2Q9UHN6 1383 aa34.54■■■■□ 3.12
KDELR3-202ENST00000409006 STAG3Q9UJ98 1225 aa34.53■■■■□ 3.12
KDELR3-202ENST00000409006 RPRD2Q5VT52 1461 aaKnown RBP34.52■■■■□ 3.12
KDELR3-202ENST00000409006 MYO5BQ9ULV0 1848 aa34.51■■■■□ 3.12
KDELR3-202ENST00000409006 ADGRB3O60242 1522 aa34.5■■■■□ 3.11
KDELR3-202ENST00000409006 EID1Q9Y6B2 187 aa34.49■■■■□ 3.11
KDELR3-202ENST00000409006 E9PCH4 1651 aa34.49■■■■□ 3.11
KDELR3-202ENST00000409006 IQGAP3Q86VI3 1631 aa34.47■■■■□ 3.11
KDELR3-202ENST00000409006 LRRC7Q96NW7 1537 aa34.46■■■■□ 3.11
KDELR3-202ENST00000409006 SLC52A1Q9NWF4 448 aa34.45■■■■□ 3.11
KDELR3-202ENST00000409006 ALKQ9UM73 1620 aa34.44■■■■□ 3.1
KDELR3-202ENST00000409006 XIRP1Q702N8 1843 aaKnown RBP34.4■■■■□ 3.1
KDELR3-202ENST00000409006 TOM1O60784 492 aa34.4■■■■□ 3.1
KDELR3-202ENST00000409006 PIP4K2BP78356 416 aa34.4■■■■□ 3.1
KDELR3-202ENST00000409006 RRBP1Q9P2E9 1410 aaKnown RBP34.38■■■■□ 3.09
KDELR3-202ENST00000409006 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
KDELR3-202ENST00000409006 TMEM131LA2VDJ0 1609 aa34.37■■■■□ 3.09
KDELR3-202ENST00000409006 NUP155O75694 1391 aa34.36■■■■□ 3.09
KDELR3-202ENST00000409006 DISP3Q9P2K9 1392 aa34.36■■■■□ 3.09
KDELR3-202ENST00000409006 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
KDELR3-202ENST00000409006 ZFYVE9O95405 1425 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms