RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 DDX10Q13206 875 aaKnown RBP7.44□□□□□ -1.22
VSNL1-203ENST00000406397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.44□□□□□ -1.228e-7■■■□□ 15.2
VSNL1-203ENST00000406397 LAS1LQ9Y4W2 734 aaKnown RBP7.44□□□□□ -1.22
VSNL1-203ENST00000406397 DIP2BQ9P265 1576 aa7.44□□□□□ -1.22
VSNL1-203ENST00000406397 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
VSNL1-203ENST00000406397 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
VSNL1-203ENST00000406397 HNRNPMP52272 730 aaKnown RBP eCLIP7.43□□□□□ -1.227e-6■■□□□ 11.4
VSNL1-203ENST00000406397 ABCA9Q8IUA7 1624 aa7.43□□□□□ -1.22
VSNL1-203ENST00000406397 PTPN23Q9H3S7 1636 aa7.43□□□□□ -1.22
VSNL1-203ENST00000406397 USP35Q9P2H5 1018 aa7.43□□□□□ -1.22
VSNL1-203ENST00000406397 PLCH2O75038 1416 aa7.43□□□□□ -1.22
VSNL1-203ENST00000406397 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
VSNL1-203ENST00000406397 CHIC2Q9UKJ5 165 aa7.43□□□□□ -1.22
VSNL1-203ENST00000406397 KIF13AQ9H1H9 1805 aa7.42□□□□□ -1.22
VSNL1-203ENST00000406397 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
VSNL1-203ENST00000406397 ITSN2Q9NZM3 1697 aa7.42□□□□□ -1.22
VSNL1-203ENST00000406397 CAMSAP2Q08AD1 1489 aa7.42□□□□□ -1.22
VSNL1-203ENST00000406397 EFCAB2Q5VUJ9 269 aa7.42□□□□□ -1.22
VSNL1-203ENST00000406397 DHX57Q6P158 1386 aaKnown RBP7.41□□□□□ -1.22
VSNL1-203ENST00000406397 FANCAO15360 1455 aa7.41□□□□□ -1.22
VSNL1-203ENST00000406397 GSE1Q14687 1217 aa7.41□□□□□ -1.22
VSNL1-203ENST00000406397 FAM43AQ8N2R8 423 aa7.41□□□□□ -1.22
VSNL1-203ENST00000406397 MIA2Q96PC5 1412 aa7.41□□□□□ -1.22
VSNL1-203ENST00000406397 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.22
VSNL1-203ENST00000406397 MAP3K4Q9Y6R4 1608 aa7.4□□□□□ -1.22
VSNL1-203ENST00000406397 BCL11BQ9C0K0 894 aaPredicted RBP7.4□□□□□ -1.23
VSNL1-203ENST00000406397 GLI2P10070 1586 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 SYCP2Q9BX26 1530 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 CCER2I3L3R5 266 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
VSNL1-203ENST00000406397 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
VSNL1-203ENST00000406397 AFAP1Q8N556 730 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 PTPRKQ15262 1439 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 ARHGEF12Q9NZN5 1544 aa7.39□□□□□ -1.23
VSNL1-203ENST00000406397 AKNAQ7Z591 1439 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 RAPGEF3O95398 923 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 ADGRL1O94910 1474 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 TCOF1Q13428 1488 aaKnown RBP7.38□□□□□ -1.23
VSNL1-203ENST00000406397 SCAPERQ9BY12 1400 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 FRAT1Q92837 279 aaPredicted RBP7.38□□□□□ -1.23
VSNL1-203ENST00000406397 RRP7BPQ9NSQ0 103 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 TRAPPC8Q9Y2L5 1435 aa7.38□□□□□ -1.23
VSNL1-203ENST00000406397 PPRC1Q5VV67 1664 aaKnown RBP7.38□□□□□ -1.23
VSNL1-203ENST00000406397 PPP1R15AO75807 674 aaPredicted RBP7.37□□□□□ -1.23
VSNL1-203ENST00000406397 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.235e-6■■■■□ 20.3
VSNL1-203ENST00000406397 ABCC5O15440 1437 aa7.37□□□□□ -1.23
VSNL1-203ENST00000406397 DAPK1P53355 1430 aa7.37□□□□□ -1.23
VSNL1-203ENST00000406397 ABCC1P33527 1531 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 MBD5Q9P267 1494 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 DCAF11Q8TEB1 546 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 ANP32CO43423 234 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 RRP9O43818 475 aaKnown RBP7.36□□□□□ -1.23
VSNL1-203ENST00000406397 TSPY4P0CV99 314 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 TSPY10P0CW01 314 aa7.36□□□□□ -1.23
VSNL1-203ENST00000406397 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
VSNL1-203ENST00000406397 ARAP3Q8WWN8 1544 aa7.35□□□□□ -1.23
VSNL1-203ENST00000406397 ATXN8OSP0DMR3 200 aa7.35□□□□□ -1.23
VSNL1-203ENST00000406397 DNMT1P26358 1616 aaKnown RBP7.35□□□□□ -1.23
VSNL1-203ENST00000406397 MKRN4PQ13434 485 aaPredicted RBP7.35□□□□□ -1.23
VSNL1-203ENST00000406397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.35□□□□□ -1.23
VSNL1-203ENST00000406397 PPM1GO15355 546 aaPredicted RBP7.34□□□□□ -1.23
VSNL1-203ENST00000406397 CCDC141Q6ZP82 1450 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 TEX14Q8IWB6 1497 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 NEO1Q92859 1461 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
VSNL1-203ENST00000406397 C9orf84Q5VXU9 1444 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 KIAA1107Q9UPP5 1409 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 PLEKHH2Q8IVE3 1493 aa7.34□□□□□ -1.23
VSNL1-203ENST00000406397 RRAGDQ9NQL2 400 aaPredicted RBP7.34□□□□□ -1.23
VSNL1-203ENST00000406397 SPAG9O60271 1321 aaKnown RBP7.33□□□□□ -1.24
VSNL1-203ENST00000406397 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
VSNL1-203ENST00000406397 DENND4BO75064 1496 aaPredicted RBP7.33□□□□□ -1.24
VSNL1-203ENST00000406397 SIN3AQ96ST3 1273 aa7.33□□□□□ -1.24
VSNL1-203ENST00000406397 HSP90AA1P07900 732 aaKnown RBP7.32□□□□□ -1.24
VSNL1-203ENST00000406397 POGZQ7Z3K3 1410 aa7.32□□□□□ -1.24
VSNL1-203ENST00000406397 ARHGEF5Q12774 1597 aa7.32□□□□□ -1.24
VSNL1-203ENST00000406397 CROCC2H7BZ55 1655 aa7.32□□□□□ -1.24
VSNL1-203ENST00000406397 RSPH4AQ5TD94 716 aa7.31□□□□□ -1.24
VSNL1-203ENST00000406397 NAP1L5Q96NT1 182 aaPredicted RBP7.31□□□□□ -1.24
VSNL1-203ENST00000406397 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
VSNL1-203ENST00000406397 ZNF518AQ6AHZ1 1483 aa7.31□□□□□ -1.24
VSNL1-203ENST00000406397 NFKBIBQ15653 356 aa7.31□□□□□ -1.24
VSNL1-203ENST00000406397 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
VSNL1-203ENST00000406397 NCOA1Q15788 1441 aa7.31□□□□□ -1.24
VSNL1-203ENST00000406397 PRDM4Q9UKN5 801 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 ANKRD30AQ9BXX3 1397 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 KIF15Q9NS87 1388 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 RICTORQ6R327 1708 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 LMTK3Q96Q04 1460 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 FRMPD1Q5SYB0 1578 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 KDM6BO15054 1643 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 RAB3GAP2Q9H2M9 1393 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 NAIPQ13075 1403 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 YEATS2Q9ULM3 1422 aa7.3□□□□□ -1.24
VSNL1-203ENST00000406397 SETD5Q9C0A6 1442 aa7.29□□□□□ -1.24
VSNL1-203ENST00000406397 ATP7AQ04656 1500 aa7.29□□□□□ -1.24
VSNL1-203ENST00000406397 ZFYVE16Q7Z3T8 1539 aa7.29□□□□□ -1.24
VSNL1-203ENST00000406397 RGS3P49796 1198 aa7.29□□□□□ -1.24
VSNL1-203ENST00000406397 SHANK2Q9UPX8 1470 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms