RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
VSNL1-203ENST00000406397 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
VSNL1-203ENST00000406397 NISCHQ9Y2I1 1504 aa11.37□□□□□ -0.59
VSNL1-203ENST00000406397 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
VSNL1-203ENST00000406397 POTEDQ86YR6 584 aa10.27□□□□□ -0.77
VSNL1-203ENST00000406397 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
VSNL1-203ENST00000406397 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
VSNL1-203ENST00000406397 ABCC9O60706 1549 aa9.69□□□□□ -0.86
VSNL1-203ENST00000406397 DCAF8L2P0C7V8 631 aa9.6□□□□□ -0.87
VSNL1-203ENST00000406397 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
VSNL1-203ENST00000406397 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
VSNL1-203ENST00000406397 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
VSNL1-203ENST00000406397 ADRA2BP18089 450 aa9.42□□□□□ -0.9
VSNL1-203ENST00000406397 DCAF1Q9Y4B6 1507 aa9.33□□□□□ -0.92
VSNL1-203ENST00000406397 NACADO15069 1562 aa9.32□□□□□ -0.92
VSNL1-203ENST00000406397 HRCP23327 699 aa9.32□□□□□ -0.92
VSNL1-203ENST00000406397 MYT1Q01538 1121 aa9.31□□□□□ -0.92
VSNL1-203ENST00000406397 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
VSNL1-203ENST00000406397 FOXD1Q16676 465 aa9.3□□□□□ -0.92
VSNL1-203ENST00000406397 SHROOM4Q9ULL8 1493 aa9.29□□□□□ -0.92
VSNL1-203ENST00000406397 MYO15BQ96JP2 1530 aa9.28□□□□□ -0.92
VSNL1-203ENST00000406397 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
VSNL1-203ENST00000406397 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
VSNL1-203ENST00000406397 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
VSNL1-203ENST00000406397 MSH5O43196 834 aa9.19□□□□□ -0.94
VSNL1-203ENST00000406397 PPARGC1BQ86YN6 1023 aaKnown RBP9.17□□□□□ -0.94
VSNL1-203ENST00000406397 KCNA4P22459 653 aa9.14□□□□□ -0.95
VSNL1-203ENST00000406397 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
VSNL1-203ENST00000406397 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
VSNL1-203ENST00000406397 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
VSNL1-203ENST00000406397 BICRAQ9NZM4 1560 aa9.04□□□□□ -0.96
VSNL1-203ENST00000406397 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
VSNL1-203ENST00000406397 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
VSNL1-203ENST00000406397 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.98
VSNL1-203ENST00000406397 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
VSNL1-203ENST00000406397 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
VSNL1-203ENST00000406397 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
VSNL1-203ENST00000406397 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
VSNL1-203ENST00000406397 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
VSNL1-203ENST00000406397 SMARCA4P51532 1647 aa8.78□□□□□ -1
VSNL1-203ENST00000406397 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1
VSNL1-203ENST00000406397 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
VSNL1-203ENST00000406397 BCL11AQ9H165 835 aa8.75□□□□□ -1.01
VSNL1-203ENST00000406397 WIZO95785 1651 aa8.74□□□□□ -1.01
VSNL1-203ENST00000406397 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
VSNL1-203ENST00000406397 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
VSNL1-203ENST00000406397 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
VSNL1-203ENST00000406397 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
VSNL1-203ENST00000406397 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
VSNL1-203ENST00000406397 ATAD2BQ9ULI0 1458 aa8.69□□□□□ -1.02
VSNL1-203ENST00000406397 NEUROD1Q13562 356 aa8.68□□□□□ -1.02
VSNL1-203ENST00000406397 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
VSNL1-203ENST00000406397 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
VSNL1-203ENST00000406397 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
VSNL1-203ENST00000406397 PEG3Q9GZU2 1588 aa8.63□□□□□ -1.03
VSNL1-203ENST00000406397 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
VSNL1-203ENST00000406397 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
VSNL1-203ENST00000406397 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
VSNL1-203ENST00000406397 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
VSNL1-203ENST00000406397 PPP4R3CPQ6ZMV5 832 aa8.59□□□□□ -1.03
VSNL1-203ENST00000406397 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
VSNL1-203ENST00000406397 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
VSNL1-203ENST00000406397 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
VSNL1-203ENST00000406397 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
VSNL1-203ENST00000406397 ZBTB22O15209 634 aa8.52□□□□□ -1.05
VSNL1-203ENST00000406397 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
VSNL1-203ENST00000406397 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.05
VSNL1-203ENST00000406397 NESP48681 1621 aa8.45□□□□□ -1.06
VSNL1-203ENST00000406397 NPM3O75607 178 aaKnown RBP8.45□□□□□ -1.06
VSNL1-203ENST00000406397 APLP2Q06481 763 aa8.45□□□□□ -1.06
VSNL1-203ENST00000406397 ANP32EQ9BTT0 268 aa8.44□□□□□ -1.06
VSNL1-203ENST00000406397 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
VSNL1-203ENST00000406397 CFTRP13569 1480 aa8.39□□□□□ -1.07
VSNL1-203ENST00000406397 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
VSNL1-203ENST00000406397 ABCC8Q09428 1581 aa8.34□□□□□ -1.07
VSNL1-203ENST00000406397 MAPK8IP2Q13387 824 aaPredicted RBP8.34□□□□□ -1.07
VSNL1-203ENST00000406397 CACNB1Q02641 598 aaPredicted RBP8.33□□□□□ -1.08
VSNL1-203ENST00000406397 FANCD2Q9BXW9 1451 aa8.33□□□□□ -1.08
VSNL1-203ENST00000406397 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
VSNL1-203ENST00000406397 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
VSNL1-203ENST00000406397 PDS5BQ9NTI5 1447 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 KIF21AQ7Z4S6 1674 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
VSNL1-203ENST00000406397 TRIM41Q8WV44 630 aa8.28□□□□□ -1.08
VSNL1-203ENST00000406397 WRNQ14191 1432 aaPredicted RBP eCLIP8.27□□□□□ -1.09
VSNL1-203ENST00000406397 YTHDC1Q96MU7 727 aaKnown RBP8.26□□□□□ -1.09
VSNL1-203ENST00000406397 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
VSNL1-203ENST00000406397 CUX1P39880 1505 aa8.25□□□□□ -1.09
VSNL1-203ENST00000406397 URB2Q14146 1524 aaKnown RBP8.24□□□□□ -1.09
VSNL1-203ENST00000406397 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
VSNL1-203ENST00000406397 MRC2Q9UBG0 1479 aa8.22□□□□□ -1.09
VSNL1-203ENST00000406397 TOPBP1Q92547 1522 aa8.21□□□□□ -1.09
VSNL1-203ENST00000406397 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
VSNL1-203ENST00000406397 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
VSNL1-203ENST00000406397 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
VSNL1-203ENST00000406397 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
VSNL1-203ENST00000406397 FGD5Q6ZNL6 1462 aa8.19□□□□□ -1.1
VSNL1-203ENST00000406397 BIVM-ERCC5R4GMW8 1640 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms