RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 AEBP2Q6ZN18 517 aaPredicted RBP11.76□□□□□ -0.53
VSNL1-203ENST00000406397 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
VSNL1-203ENST00000406397 NISCHQ9Y2I1 1504 aa11.37□□□□□ -0.59
VSNL1-203ENST00000406397 PHF23Q9BUL5 403 aaPredicted RBP10.51□□□□□ -0.73
VSNL1-203ENST00000406397 POTEDQ86YR6 584 aa10.27□□□□□ -0.77
VSNL1-203ENST00000406397 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
VSNL1-203ENST00000406397 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
VSNL1-203ENST00000406397 ABCC9O60706 1549 aa9.69□□□□□ -0.86
VSNL1-203ENST00000406397 DCAF8L2P0C7V8 631 aa9.6□□□□□ -0.87
VSNL1-203ENST00000406397 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
VSNL1-203ENST00000406397 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
VSNL1-203ENST00000406397 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
VSNL1-203ENST00000406397 ADRA2BP18089 450 aa9.42□□□□□ -0.9
VSNL1-203ENST00000406397 DCAF1Q9Y4B6 1507 aa9.33□□□□□ -0.92
VSNL1-203ENST00000406397 NACADO15069 1562 aa9.32□□□□□ -0.92
VSNL1-203ENST00000406397 HRCP23327 699 aa9.32□□□□□ -0.92
VSNL1-203ENST00000406397 MYT1Q01538 1121 aa9.31□□□□□ -0.92
VSNL1-203ENST00000406397 RB1CC1Q8TDY2 1594 aa9.3□□□□□ -0.92
VSNL1-203ENST00000406397 FOXD1Q16676 465 aa9.3□□□□□ -0.92
VSNL1-203ENST00000406397 SHROOM4Q9ULL8 1493 aa9.29□□□□□ -0.92
VSNL1-203ENST00000406397 MYO15BQ96JP2 1530 aa9.28□□□□□ -0.92
VSNL1-203ENST00000406397 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
VSNL1-203ENST00000406397 EHMT2Q96KQ7 1210 aa9.23□□□□□ -0.93
VSNL1-203ENST00000406397 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
VSNL1-203ENST00000406397 MSH5O43196 834 aa9.19□□□□□ -0.94
VSNL1-203ENST00000406397 PPARGC1BQ86YN6 1023 aaKnown RBP9.17□□□□□ -0.94
VSNL1-203ENST00000406397 KCNA4P22459 653 aa9.14□□□□□ -0.95
VSNL1-203ENST00000406397 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
VSNL1-203ENST00000406397 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
VSNL1-203ENST00000406397 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
VSNL1-203ENST00000406397 BICRAQ9NZM4 1560 aa9.04□□□□□ -0.96
VSNL1-203ENST00000406397 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
VSNL1-203ENST00000406397 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
VSNL1-203ENST00000406397 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.98
VSNL1-203ENST00000406397 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
VSNL1-203ENST00000406397 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
VSNL1-203ENST00000406397 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
VSNL1-203ENST00000406397 EIF4G1Q04637 1599 aaKnown RBP8.79□□□□□ -1
VSNL1-203ENST00000406397 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
VSNL1-203ENST00000406397 SMARCA4P51532 1647 aa8.78□□□□□ -1
VSNL1-203ENST00000406397 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1
VSNL1-203ENST00000406397 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
VSNL1-203ENST00000406397 BCL11AQ9H165 835 aa8.75□□□□□ -1.01
VSNL1-203ENST00000406397 WIZO95785 1651 aa8.74□□□□□ -1.01
VSNL1-203ENST00000406397 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
VSNL1-203ENST00000406397 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
VSNL1-203ENST00000406397 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
VSNL1-203ENST00000406397 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
VSNL1-203ENST00000406397 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
VSNL1-203ENST00000406397 ATAD2BQ9ULI0 1458 aa8.69□□□□□ -1.02
VSNL1-203ENST00000406397 NEUROD1Q13562 356 aa8.68□□□□□ -1.02
VSNL1-203ENST00000406397 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
VSNL1-203ENST00000406397 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
VSNL1-203ENST00000406397 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
VSNL1-203ENST00000406397 PEG3Q9GZU2 1588 aa8.63□□□□□ -1.03
VSNL1-203ENST00000406397 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
VSNL1-203ENST00000406397 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
VSNL1-203ENST00000406397 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
VSNL1-203ENST00000406397 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
VSNL1-203ENST00000406397 PPP4R3CPQ6ZMV5 832 aa8.59□□□□□ -1.03
VSNL1-203ENST00000406397 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
VSNL1-203ENST00000406397 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
VSNL1-203ENST00000406397 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
VSNL1-203ENST00000406397 CCDC88BA6NC98 1476 aa8.54□□□□□ -1.04
VSNL1-203ENST00000406397 ZBTB22O15209 634 aa8.52□□□□□ -1.05
VSNL1-203ENST00000406397 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
VSNL1-203ENST00000406397 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.05
VSNL1-203ENST00000406397 NESP48681 1621 aa8.45□□□□□ -1.06
VSNL1-203ENST00000406397 NPM3O75607 178 aaKnown RBP8.45□□□□□ -1.06
VSNL1-203ENST00000406397 APLP2Q06481 763 aa8.45□□□□□ -1.06
VSNL1-203ENST00000406397 ANP32EQ9BTT0 268 aa8.44□□□□□ -1.06
VSNL1-203ENST00000406397 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
VSNL1-203ENST00000406397 CFTRP13569 1480 aa8.39□□□□□ -1.07
VSNL1-203ENST00000406397 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
VSNL1-203ENST00000406397 ABCC8Q09428 1581 aa8.34□□□□□ -1.07
VSNL1-203ENST00000406397 MAPK8IP2Q13387 824 aaPredicted RBP8.34□□□□□ -1.07
VSNL1-203ENST00000406397 CACNB1Q02641 598 aaPredicted RBP8.33□□□□□ -1.08
VSNL1-203ENST00000406397 FANCD2Q9BXW9 1451 aa8.33□□□□□ -1.08
VSNL1-203ENST00000406397 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
VSNL1-203ENST00000406397 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
VSNL1-203ENST00000406397 PDS5BQ9NTI5 1447 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 KIF21AQ7Z4S6 1674 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
VSNL1-203ENST00000406397 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
VSNL1-203ENST00000406397 TRIM41Q8WV44 630 aa8.28□□□□□ -1.08
VSNL1-203ENST00000406397 WRNQ14191 1432 aaPredicted RBP eCLIP8.27□□□□□ -1.09
VSNL1-203ENST00000406397 YTHDC1Q96MU7 727 aaKnown RBP8.26□□□□□ -1.09
VSNL1-203ENST00000406397 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
VSNL1-203ENST00000406397 CUX1P39880 1505 aa8.25□□□□□ -1.09
VSNL1-203ENST00000406397 URB2Q14146 1524 aaKnown RBP8.24□□□□□ -1.09
VSNL1-203ENST00000406397 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
VSNL1-203ENST00000406397 MRC2Q9UBG0 1479 aa8.22□□□□□ -1.09
VSNL1-203ENST00000406397 TOPBP1Q92547 1522 aa8.21□□□□□ -1.09
VSNL1-203ENST00000406397 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
VSNL1-203ENST00000406397 THOC2Q8NI27 1593 aaKnown RBP8.2□□□□□ -1.1
VSNL1-203ENST00000406397 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
VSNL1-203ENST00000406397 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
VSNL1-203ENST00000406397 FGD5Q6ZNL6 1462 aa8.19□□□□□ -1.1
VSNL1-203ENST00000406397 BIVM-ERCC5R4GMW8 1640 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms