RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
RAB1A-201ENST00000398529 WASHC2CQ9Y4E1 1318 aa22.85■■□□□ 1.25
RAB1A-201ENST00000398529 TNRQ92752 1358 aa22.85■■□□□ 1.25
RAB1A-201ENST00000398529 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
RAB1A-201ENST00000398529 TOM1O60784 492 aa22.84■■□□□ 1.25
RAB1A-201ENST00000398529 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.25
RAB1A-201ENST00000398529 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
RAB1A-201ENST00000398529 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
RAB1A-201ENST00000398529 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
RAB1A-201ENST00000398529 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
RAB1A-201ENST00000398529 TSPY4P0CV99 314 aa22.81■■□□□ 1.24
RAB1A-201ENST00000398529 TSPY10P0CW01 314 aa22.81■■□□□ 1.24
RAB1A-201ENST00000398529 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
RAB1A-201ENST00000398529 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
RAB1A-201ENST00000398529 PIP4K2BP78356 416 aa22.8■■□□□ 1.24
RAB1A-201ENST00000398529 CPS1P31327 1500 aa22.8■■□□□ 1.24
RAB1A-201ENST00000398529 PZPP20742 1482 aa22.79■■□□□ 1.24
RAB1A-201ENST00000398529 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
RAB1A-201ENST00000398529 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
RAB1A-201ENST00000398529 NCOA2Q15596 1464 aa22.75■■□□□ 1.23
RAB1A-201ENST00000398529 NLRP1Q9C000 1473 aa22.74■■□□□ 1.23
RAB1A-201ENST00000398529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.74■■□□□ 1.23
RAB1A-201ENST00000398529 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
RAB1A-201ENST00000398529 HSPA1LP34931 641 aa22.73■■□□□ 1.23
RAB1A-201ENST00000398529 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
RAB1A-201ENST00000398529 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
RAB1A-201ENST00000398529 ARHGEF5Q12774 1597 aa22.69■■□□□ 1.22
RAB1A-201ENST00000398529 NPHP4O75161 1426 aaPredicted RBP22.68■■□□□ 1.22
RAB1A-201ENST00000398529 DEPDC5O75140 1603 aa22.67■■□□□ 1.22
RAB1A-201ENST00000398529 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
RAB1A-201ENST00000398529 MED14O60244 1454 aa22.65■■□□□ 1.22
RAB1A-201ENST00000398529 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
RAB1A-201ENST00000398529 IQGAP1P46940 1657 aa22.63■■□□□ 1.21
RAB1A-201ENST00000398529 ZC3H13Q5T200 1668 aaKnown RBP22.63■■□□□ 1.21
RAB1A-201ENST00000398529 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
RAB1A-201ENST00000398529 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
RAB1A-201ENST00000398529 CFAP65Q6ZU64 1925 aaKnown RBP22.59■■□□□ 1.21
RAB1A-201ENST00000398529 ABCC3O15438 1527 aa22.58■■□□□ 1.21
RAB1A-201ENST00000398529 EIF2AK4Q9P2K8 1649 aaKnown RBP22.58■■□□□ 1.21
RAB1A-201ENST00000398529 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
RAB1A-201ENST00000398529 LRRC9Q6ZRR7 1453 aa22.56■■□□□ 1.2
RAB1A-201ENST00000398529 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
RAB1A-201ENST00000398529 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
RAB1A-201ENST00000398529 SYNMO15061 1565 aa22.52■■□□□ 1.2
RAB1A-201ENST00000398529 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
RAB1A-201ENST00000398529 EID1Q9Y6B2 187 aa22.52■■□□□ 1.2
RAB1A-201ENST00000398529 CEP152O94986 1710 aa22.51■■□□□ 1.19
RAB1A-201ENST00000398529 MYOM3Q5VTT5 1437 aa22.51■■□□□ 1.19
RAB1A-201ENST00000398529 LRRC7Q96NW7 1537 aa22.51■■□□□ 1.19
RAB1A-201ENST00000398529 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
RAB1A-201ENST00000398529 DUOX2Q9NRD8 1548 aa22.5■■□□□ 1.19
RAB1A-201ENST00000398529 UBR1Q8IWV7 1749 aa22.49■■□□□ 1.19
RAB1A-201ENST00000398529 SCAF11Q99590 1463 aaKnown RBP22.48■■□□□ 1.19
RAB1A-201ENST00000398529 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
RAB1A-201ENST00000398529 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
RAB1A-201ENST00000398529 APLP2Q06481 763 aa22.45■■□□□ 1.18
RAB1A-201ENST00000398529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.18
RAB1A-201ENST00000398529 MAP3K1Q13233 1512 aa22.45■■□□□ 1.18
RAB1A-201ENST00000398529 ALKQ9UM73 1620 aa22.45■■□□□ 1.18
RAB1A-201ENST00000398529 KANK1Q14678 1352 aa22.44■■□□□ 1.18
RAB1A-201ENST00000398529 MROH1Q8NDA8 1641 aa22.44■■□□□ 1.18
RAB1A-201ENST00000398529 KIF15Q9NS87 1388 aa22.43■■□□□ 1.18
RAB1A-201ENST00000398529 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
RAB1A-201ENST00000398529 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
RAB1A-201ENST00000398529 ARHGAP31Q2M1Z3 1444 aa22.41■■□□□ 1.18
RAB1A-201ENST00000398529 LTKP29376 864 aa22.41■■□□□ 1.18
RAB1A-201ENST00000398529 SLIT1O75093 1534 aa22.41■■□□□ 1.18
RAB1A-201ENST00000398529 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
RAB1A-201ENST00000398529 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
RAB1A-201ENST00000398529 PRDM15P57071 1507 aaPredicted RBP22.38■■□□□ 1.17
RAB1A-201ENST00000398529 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
RAB1A-201ENST00000398529 CROCC2H7BZ55 1655 aa22.35■■□□□ 1.17
RAB1A-201ENST00000398529 TMEM2Q9UHN6 1383 aa22.35■■□□□ 1.17
RAB1A-201ENST00000398529 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
RAB1A-201ENST00000398529 ABCC5O15440 1437 aa22.33■■□□□ 1.17
RAB1A-201ENST00000398529 PTPN23Q9H3S7 1636 aa22.33■■□□□ 1.17
RAB1A-201ENST00000398529 XIRP1Q702N8 1843 aaKnown RBP22.32■■□□□ 1.16
RAB1A-201ENST00000398529 BCANQ96GW7 911 aa22.32■■□□□ 1.16
RAB1A-201ENST00000398529 KDM5AP29375 1690 aaKnown RBP22.31■■□□□ 1.16
RAB1A-201ENST00000398529 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
RAB1A-201ENST00000398529 EFCAB6Q5THR3 1501 aa22.31■■□□□ 1.16
RAB1A-201ENST00000398529 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
RAB1A-201ENST00000398529 DAPK1P53355 1430 aa22.3■■□□□ 1.16
RAB1A-201ENST00000398529 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
RAB1A-201ENST00000398529 KCNA6P17658 529 aa22.29■■□□□ 1.16
RAB1A-201ENST00000398529 IDI1Q13907 227 aa22.28■■□□□ 1.16
RAB1A-201ENST00000398529 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
RAB1A-201ENST00000398529 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
RAB1A-201ENST00000398529 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
RAB1A-201ENST00000398529 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
RAB1A-201ENST00000398529 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
RAB1A-201ENST00000398529 LMTK2Q8IWU2 1503 aa22.24■■□□□ 1.15
RAB1A-201ENST00000398529 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
RAB1A-201ENST00000398529 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
RAB1A-201ENST00000398529 MSH6P52701 1360 aa22.21■■□□□ 1.15
RAB1A-201ENST00000398529 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.15
RAB1A-201ENST00000398529 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
RAB1A-201ENST00000398529 ADGRB3O60242 1522 aa22.19■■□□□ 1.14
RAB1A-201ENST00000398529 TET3O43151 1660 aa22.18■■□□□ 1.14
RAB1A-201ENST00000398529 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms