RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 NISCHQ9Y2I1 1504 aa35.9■■■■□ 3.34
RAB1A-201ENST00000398529 ABCC9O60706 1549 aa32.65■■■□□ 2.82
RAB1A-201ENST00000398529 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
RAB1A-201ENST00000398529 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
RAB1A-201ENST00000398529 DNAJC5BQ9UF47 199 aa30.79■■■□□ 2.52
RAB1A-201ENST00000398529 NACADO15069 1562 aa30.7■■■□□ 2.5
RAB1A-201ENST00000398529 DCAF8L2P0C7V8 631 aa30.61■■■□□ 2.49
RAB1A-201ENST00000398529 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
RAB1A-201ENST00000398529 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
RAB1A-201ENST00000398529 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
RAB1A-201ENST00000398529 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
RAB1A-201ENST00000398529 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
RAB1A-201ENST00000398529 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
RAB1A-201ENST00000398529 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
RAB1A-201ENST00000398529 SCRIBQ14160 1630 aa29.48■■■□□ 2.31
RAB1A-201ENST00000398529 CC2D2AQ9P2K1 1620 aa29.47■■■□□ 2.31
RAB1A-201ENST00000398529 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
RAB1A-201ENST00000398529 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
RAB1A-201ENST00000398529 DNAJC5Q9H3Z4 198 aa28.61■■■□□ 2.17
RAB1A-201ENST00000398529 NCAPD3P42695 1498 aa28.31■■■□□ 2.12
RAB1A-201ENST00000398529 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
RAB1A-201ENST00000398529 CUX2O14529 1486 aa28.28■■■□□ 2.12
RAB1A-201ENST00000398529 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
RAB1A-201ENST00000398529 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
RAB1A-201ENST00000398529 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
RAB1A-201ENST00000398529 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
RAB1A-201ENST00000398529 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
RAB1A-201ENST00000398529 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
RAB1A-201ENST00000398529 NESP48681 1621 aa27.92■■■□□ 2.06
RAB1A-201ENST00000398529 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
RAB1A-201ENST00000398529 LAMC3Q9Y6N6 1575 aa27.76■■■□□ 2.03
RAB1A-201ENST00000398529 THOC2Q8NI27 1593 aaKnown RBP27.68■■■□□ 2.02
RAB1A-201ENST00000398529 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
RAB1A-201ENST00000398529 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
RAB1A-201ENST00000398529 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
RAB1A-201ENST00000398529 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
RAB1A-201ENST00000398529 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
RAB1A-201ENST00000398529 WIZO95785 1651 aa27.31■■□□□ 1.96
RAB1A-201ENST00000398529 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
RAB1A-201ENST00000398529 WDR62O43379 1518 aa27.27■■□□□ 1.96
RAB1A-201ENST00000398529 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
RAB1A-201ENST00000398529 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.94
RAB1A-201ENST00000398529 CFTRP13569 1480 aa27.06■■□□□ 1.92
RAB1A-201ENST00000398529 OSCARQ8IYS5 282 aa27.03■■□□□ 1.92
RAB1A-201ENST00000398529 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
RAB1A-201ENST00000398529 TOP2AP11388 1531 aaKnown RBP26.96■■□□□ 1.91
RAB1A-201ENST00000398529 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
RAB1A-201ENST00000398529 PRDM2Q13029 1718 aa26.82■■□□□ 1.88
RAB1A-201ENST00000398529 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
RAB1A-201ENST00000398529 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
RAB1A-201ENST00000398529 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
RAB1A-201ENST00000398529 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
RAB1A-201ENST00000398529 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
RAB1A-201ENST00000398529 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
RAB1A-201ENST00000398529 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
RAB1A-201ENST00000398529 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
RAB1A-201ENST00000398529 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
RAB1A-201ENST00000398529 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
RAB1A-201ENST00000398529 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
RAB1A-201ENST00000398529 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
RAB1A-201ENST00000398529 FBLN2P98095 1184 aa26.39■■□□□ 1.82
RAB1A-201ENST00000398529 CHD1O14646 1710 aa26.36■■□□□ 1.81
RAB1A-201ENST00000398529 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.811e-7■■■□□ 16.7
RAB1A-201ENST00000398529 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
RAB1A-201ENST00000398529 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
RAB1A-201ENST00000398529 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
RAB1A-201ENST00000398529 SOGA1O94964 1423 aa26.22■■□□□ 1.79
RAB1A-201ENST00000398529 RAD54L2Q9Y4B4 1467 aa26.18■■□□□ 1.78
RAB1A-201ENST00000398529 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
RAB1A-201ENST00000398529 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
RAB1A-201ENST00000398529 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
RAB1A-201ENST00000398529 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
RAB1A-201ENST00000398529 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
RAB1A-201ENST00000398529 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
RAB1A-201ENST00000398529 SYNJ1O43426 1573 aa26.06■■□□□ 1.76
RAB1A-201ENST00000398529 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
RAB1A-201ENST00000398529 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
RAB1A-201ENST00000398529 CUX1P39880 1505 aa25.98■■□□□ 1.75
RAB1A-201ENST00000398529 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
RAB1A-201ENST00000398529 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
RAB1A-201ENST00000398529 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
RAB1A-201ENST00000398529 GAPVD1Q14C86 1478 aa25.88■■□□□ 1.73
RAB1A-201ENST00000398529 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
RAB1A-201ENST00000398529 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
RAB1A-201ENST00000398529 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
RAB1A-201ENST00000398529 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
RAB1A-201ENST00000398529 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
RAB1A-201ENST00000398529 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
RAB1A-201ENST00000398529 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
RAB1A-201ENST00000398529 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
RAB1A-201ENST00000398529 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
RAB1A-201ENST00000398529 NUP160Q12769 1436 aa25.54■■□□□ 1.68
RAB1A-201ENST00000398529 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
RAB1A-201ENST00000398529 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
RAB1A-201ENST00000398529 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
RAB1A-201ENST00000398529 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
RAB1A-201ENST00000398529 SHROOM2Q13796 1616 aa25.47■■□□□ 1.67
RAB1A-201ENST00000398529 PRG4Q92954 1404 aaPredicted RBP25.38■■□□□ 1.65
RAB1A-201ENST00000398529 JPH4Q96JJ6 628 aa25.37■■□□□ 1.65
RAB1A-201ENST00000398529 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms