RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TNRQ92752 1358 aa21.14■□□□□ 0.98
CLCN6-205ENST00000376492 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
CLCN6-205ENST00000376492 KIF3BO15066 747 aa21.13■□□□□ 0.97
CLCN6-205ENST00000376492 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
CLCN6-205ENST00000376492 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
CLCN6-205ENST00000376492 PZPP20742 1482 aa21.12■□□□□ 0.97
CLCN6-205ENST00000376492 CAMSAP2Q08AD1 1489 aa21.11■□□□□ 0.97
CLCN6-205ENST00000376492 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
CLCN6-205ENST00000376492 NCOA2Q15596 1464 aa21.09■□□□□ 0.97
CLCN6-205ENST00000376492 POLR1AO95602 1720 aaPredicted RBP21.08■□□□□ 0.97
CLCN6-205ENST00000376492 HSPA1LP34931 641 aa21.08■□□□□ 0.97
CLCN6-205ENST00000376492 PIP4K2BP78356 416 aa21.07■□□□□ 0.96
CLCN6-205ENST00000376492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLCN6-205ENST00000376492 SHANK2Q9UPX8 1470 aa21.07■□□□□ 0.96
CLCN6-205ENST00000376492 WASHC2CQ9Y4E1 1318 aa21.06■□□□□ 0.96
CLCN6-205ENST00000376492 CPS1P31327 1500 aa21.06■□□□□ 0.96
CLCN6-205ENST00000376492 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
CLCN6-205ENST00000376492 MIA2Q96PC5 1412 aa21.04■□□□□ 0.96
CLCN6-205ENST00000376492 VWDEQ8N2E2 1590 aa21.03■□□□□ 0.96
CLCN6-205ENST00000376492 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.96
CLCN6-205ENST00000376492 ANKLE2Q86XL3 938 aa21.02■□□□□ 0.96
CLCN6-205ENST00000376492 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.95
CLCN6-205ENST00000376492 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
CLCN6-205ENST00000376492 TOM1O60784 492 aa21■□□□□ 0.95
CLCN6-205ENST00000376492 NPHP4O75161 1426 aaPredicted RBP21■□□□□ 0.95
CLCN6-205ENST00000376492 ARHGEF5Q12774 1597 aa20.99■□□□□ 0.95
CLCN6-205ENST00000376492 RSPH4AQ5TD94 716 aa20.99■□□□□ 0.95
CLCN6-205ENST00000376492 THEMISQ8N1K5 641 aaPredicted RBP20.99■□□□□ 0.95
CLCN6-205ENST00000376492 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
CLCN6-205ENST00000376492 MED14O60244 1454 aa20.98■□□□□ 0.95
CLCN6-205ENST00000376492 ABCC3O15438 1527 aa20.96■□□□□ 0.95
CLCN6-205ENST00000376492 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
CLCN6-205ENST00000376492 TSPY4P0CV99 314 aa20.95■□□□□ 0.94
CLCN6-205ENST00000376492 TSPY10P0CW01 314 aa20.95■□□□□ 0.94
CLCN6-205ENST00000376492 RNF17Q9BXT8 1623 aaKnown RBP20.94■□□□□ 0.94
CLCN6-205ENST00000376492 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
CLCN6-205ENST00000376492 ERVK-7P63135 1459 aa20.92■□□□□ 0.94
CLCN6-205ENST00000376492 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
CLCN6-205ENST00000376492 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
CLCN6-205ENST00000376492 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
CLCN6-205ENST00000376492 MROH1Q8NDA8 1641 aa20.89■□□□□ 0.94
CLCN6-205ENST00000376492 STRCP1A6NGW2 1772 aa20.89■□□□□ 0.93
CLCN6-205ENST00000376492 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.93
CLCN6-205ENST00000376492 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
CLCN6-205ENST00000376492 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
CLCN6-205ENST00000376492 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
CLCN6-205ENST00000376492 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
CLCN6-205ENST00000376492 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
CLCN6-205ENST00000376492 SYNMO15061 1565 aa20.84■□□□□ 0.93
CLCN6-205ENST00000376492 CEP152O94986 1710 aa20.83■□□□□ 0.92
CLCN6-205ENST00000376492 SCAF11Q99590 1463 aaKnown RBP20.82■□□□□ 0.92
CLCN6-205ENST00000376492 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
CLCN6-205ENST00000376492 MYOM3Q5VTT5 1437 aa20.8■□□□□ 0.92
CLCN6-205ENST00000376492 DUOX2Q9NRD8 1548 aa20.79■□□□□ 0.92
CLCN6-205ENST00000376492 LTKP29376 864 aa20.79■□□□□ 0.92
CLCN6-205ENST00000376492 ARHGAP23Q9P227 1491 aa20.78■□□□□ 0.92
CLCN6-205ENST00000376492 SLIT1O75093 1534 aa20.77■□□□□ 0.92
CLCN6-205ENST00000376492 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
CLCN6-205ENST00000376492 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
CLCN6-205ENST00000376492 TXNDC2Q86VQ3 553 aa20.75■□□□□ 0.91
CLCN6-205ENST00000376492 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
CLCN6-205ENST00000376492 ARHGAP31Q2M1Z3 1444 aa20.74■□□□□ 0.91
CLCN6-205ENST00000376492 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
CLCN6-205ENST00000376492 ABCC5O15440 1437 aa20.72■□□□□ 0.91
CLCN6-205ENST00000376492 ERBINQ96RT1 1412 aa20.72■□□□□ 0.91
CLCN6-205ENST00000376492 RRP7BPQ9NSQ0 103 aa20.72■□□□□ 0.91
CLCN6-205ENST00000376492 CFAP65Q6ZU64 1925 aaKnown RBP20.72■□□□□ 0.91
CLCN6-205ENST00000376492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.911e-7■■□□□ 11.6
CLCN6-205ENST00000376492 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
CLCN6-205ENST00000376492 CROCC2H7BZ55 1655 aa20.69■□□□□ 0.9
CLCN6-205ENST00000376492 TMEM2Q9UHN6 1383 aa20.69■□□□□ 0.9
CLCN6-205ENST00000376492 RGS17Q9UGC6 210 aaPredicted RBP20.68■□□□□ 0.9
CLCN6-205ENST00000376492 EID1Q9Y6B2 187 aa20.68■□□□□ 0.9
CLCN6-205ENST00000376492 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
CLCN6-205ENST00000376492 DAPK1P53355 1430 aa20.66■□□□□ 0.9
CLCN6-205ENST00000376492 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
CLCN6-205ENST00000376492 TMEM94Q12767 1356 aa20.64■□□□□ 0.89
CLCN6-205ENST00000376492 STAG3Q9UJ98 1225 aa20.64■□□□□ 0.89
CLCN6-205ENST00000376492 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
CLCN6-205ENST00000376492 KANK1Q14678 1352 aa20.62■□□□□ 0.89
CLCN6-205ENST00000376492 IDI1Q13907 227 aa20.62■□□□□ 0.89
CLCN6-205ENST00000376492 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
CLCN6-205ENST00000376492 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
CLCN6-205ENST00000376492 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
CLCN6-205ENST00000376492 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
CLCN6-205ENST00000376492 CHIC2Q9UKJ5 165 aa20.6■□□□□ 0.89
CLCN6-205ENST00000376492 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
CLCN6-205ENST00000376492 TET3O43151 1660 aa20.58■□□□□ 0.89
CLCN6-205ENST00000376492 KCNA6P17658 529 aa20.58■□□□□ 0.89
CLCN6-205ENST00000376492 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
CLCN6-205ENST00000376492 NOS1P29475 1434 aa20.57■□□□□ 0.88
CLCN6-205ENST00000376492 ADGRB3O60242 1522 aa20.57■□□□□ 0.88
CLCN6-205ENST00000376492 ANKRD30AQ9BXX3 1397 aa20.57■□□□□ 0.88
CLCN6-205ENST00000376492 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
CLCN6-205ENST00000376492 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
CLCN6-205ENST00000376492 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
CLCN6-205ENST00000376492 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
CLCN6-205ENST00000376492 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
CLCN6-205ENST00000376492 APLP2Q06481 763 aa20.51■□□□□ 0.87
CLCN6-205ENST00000376492 BCANQ96GW7 911 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms