RNA–Protein interactions for RNA: ENST00000375345.3

APOC3-202, Transcript of apolipoprotein C3, humanhuman

TSL 5 BASIC

Gene APOC3, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-202ENST00000375345 TSPY10P0CW01 314 aa23.76■■□□□ 1.39
APOC3-202ENST00000375345 NCKAP5LQ9HCH0 1330 aa23.76■■□□□ 1.39
APOC3-202ENST00000375345 KIF3BO15066 747 aa23.75■■□□□ 1.39
APOC3-202ENST00000375345 POLR1AO95602 1720 aaPredicted RBP23.75■■□□□ 1.39
APOC3-202ENST00000375345 PZPP20742 1482 aa23.74■■□□□ 1.39
APOC3-202ENST00000375345 DNMT1P26358 1616 aaKnown RBP23.73■■□□□ 1.39
APOC3-202ENST00000375345 TNRQ92752 1358 aa23.73■■□□□ 1.39
APOC3-202ENST00000375345 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
APOC3-202ENST00000375345 WASHC2CQ9Y4E1 1318 aa23.72■■□□□ 1.39
APOC3-202ENST00000375345 VPS8Q8N3P4 1428 aa23.71■■□□□ 1.39
APOC3-202ENST00000375345 ZNF335Q9H4Z2 1342 aaPredicted RBP23.69■■□□□ 1.38
APOC3-202ENST00000375345 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
APOC3-202ENST00000375345 LRRC9Q6ZRR7 1453 aa23.68■■□□□ 1.38
APOC3-202ENST00000375345 NLRP1Q9C000 1473 aa23.68■■□□□ 1.38
APOC3-202ENST00000375345 MAST1Q9Y2H9 1570 aa23.66■■□□□ 1.38
APOC3-202ENST00000375345 UBAP1LF5GYI3 381 aa23.66■■□□□ 1.38
APOC3-202ENST00000375345 EIF2AK4Q9P2K8 1649 aaKnown RBP23.66■■□□□ 1.38
APOC3-202ENST00000375345 CPS1P31327 1500 aa23.64■■□□□ 1.38
APOC3-202ENST00000375345 MAP3K1Q13233 1512 aa23.64■■□□□ 1.38
APOC3-202ENST00000375345 RNF17Q9BXT8 1623 aaKnown RBP23.64■■□□□ 1.38
APOC3-202ENST00000375345 THEMISQ8N1K5 641 aaPredicted RBP23.63■■□□□ 1.37
APOC3-202ENST00000375345 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
APOC3-202ENST00000375345 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
APOC3-202ENST00000375345 ANKLE2Q86XL3 938 aa23.6■■□□□ 1.37
APOC3-202ENST00000375345 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
APOC3-202ENST00000375345 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.37
APOC3-202ENST00000375345 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
APOC3-202ENST00000375345 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
APOC3-202ENST00000375345 ABCC3O15438 1527 aa23.55■■□□□ 1.36
APOC3-202ENST00000375345 SHANK2Q9UPX8 1470 aa23.55■■□□□ 1.36
APOC3-202ENST00000375345 TOM1O60784 492 aa23.54■■□□□ 1.36
APOC3-202ENST00000375345 APLP2Q06481 763 aa23.54■■□□□ 1.36
APOC3-202ENST00000375345 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
APOC3-202ENST00000375345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.53■■□□□ 1.36
APOC3-202ENST00000375345 SOCS7O14512 581 aa23.53■■□□□ 1.36
APOC3-202ENST00000375345 IQGAP1P46940 1657 aa23.52■■□□□ 1.36
APOC3-202ENST00000375345 MED14O60244 1454 aa23.52■■□□□ 1.36
APOC3-202ENST00000375345 NPHP4O75161 1426 aaPredicted RBP23.51■■□□□ 1.35
APOC3-202ENST00000375345 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
APOC3-202ENST00000375345 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
APOC3-202ENST00000375345 CEP152O94986 1710 aa23.49■■□□□ 1.35
APOC3-202ENST00000375345 CROCC2H7BZ55 1655 aa23.48■■□□□ 1.35
APOC3-202ENST00000375345 ILDR2Q71H61 639 aa23.47■■□□□ 1.35
APOC3-202ENST00000375345 ERBINQ96RT1 1412 aa23.47■■□□□ 1.35
APOC3-202ENST00000375345 SYNMO15061 1565 aa23.45■■□□□ 1.34
APOC3-202ENST00000375345 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
APOC3-202ENST00000375345 MROH1Q8NDA8 1641 aa23.44■■□□□ 1.34
APOC3-202ENST00000375345 PRDM15P57071 1507 aaPredicted RBP23.44■■□□□ 1.34
APOC3-202ENST00000375345 KIF15Q9NS87 1388 aa23.44■■□□□ 1.34
APOC3-202ENST00000375345 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
APOC3-202ENST00000375345 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
APOC3-202ENST00000375345 PTPN23Q9H3S7 1636 aa23.43■■□□□ 1.34
APOC3-202ENST00000375345 KANK1Q14678 1352 aa23.42■■□□□ 1.34
APOC3-202ENST00000375345 PIP4K2BP78356 416 aa23.42■■□□□ 1.34
APOC3-202ENST00000375345 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
APOC3-202ENST00000375345 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
APOC3-202ENST00000375345 ARHGAP31Q2M1Z3 1444 aa23.4■■□□□ 1.34
APOC3-202ENST00000375345 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
APOC3-202ENST00000375345 DAPK1P53355 1430 aa23.35■■□□□ 1.33
APOC3-202ENST00000375345 EID1Q9Y6B2 187 aa23.35■■□□□ 1.33
APOC3-202ENST00000375345 ANKRD30AQ9BXX3 1397 aa23.34■■□□□ 1.33
APOC3-202ENST00000375345 ABCC5O15440 1437 aa23.33■■□□□ 1.33
APOC3-202ENST00000375345 SLIT1O75093 1534 aa23.33■■□□□ 1.33
APOC3-202ENST00000375345 HSPA1LP34931 641 aa23.33■■□□□ 1.33
APOC3-202ENST00000375345 FGD6Q6ZV73 1430 aa23.33■■□□□ 1.32
APOC3-202ENST00000375345 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
APOC3-202ENST00000375345 MED1Q15648 1581 aaPredicted RBP23.32■■□□□ 1.32
APOC3-202ENST00000375345 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
APOC3-202ENST00000375345 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
APOC3-202ENST00000375345 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
APOC3-202ENST00000375345 LRRC7Q96NW7 1537 aa23.3■■□□□ 1.32
APOC3-202ENST00000375345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.29■■□□□ 1.32
APOC3-202ENST00000375345 STRCP1A6NGW2 1772 aa23.28■■□□□ 1.32
APOC3-202ENST00000375345 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
APOC3-202ENST00000375345 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
APOC3-202ENST00000375345 PIK3C2BO00750 1634 aa23.27■■□□□ 1.32
APOC3-202ENST00000375345 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
APOC3-202ENST00000375345 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
APOC3-202ENST00000375345 TMEM2Q9UHN6 1383 aa23.22■■□□□ 1.31
APOC3-202ENST00000375345 ALKQ9UM73 1620 aa23.2■■□□□ 1.3
APOC3-202ENST00000375345 ADGRL2O95490 1459 aa23.19■■□□□ 1.3
APOC3-202ENST00000375345 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
APOC3-202ENST00000375345 LTKP29376 864 aa23.18■■□□□ 1.3
APOC3-202ENST00000375345 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
APOC3-202ENST00000375345 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
APOC3-202ENST00000375345 SLC52A1Q9NWF4 448 aa23.16■■□□□ 1.3
APOC3-202ENST00000375345 FAM50AQ14320 339 aaKnown RBP23.13■■□□□ 1.29
APOC3-202ENST00000375345 NOS1P29475 1434 aa23.13■■□□□ 1.29
APOC3-202ENST00000375345 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
APOC3-202ENST00000375345 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
APOC3-202ENST00000375345 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
APOC3-202ENST00000375345 IDI1Q13907 227 aa23.11■■□□□ 1.29
APOC3-202ENST00000375345 TET3O43151 1660 aa23.11■■□□□ 1.29
APOC3-202ENST00000375345 NKTRP30414 1462 aaKnown RBP23.11■■□□□ 1.29
APOC3-202ENST00000375345 KCNA6P17658 529 aa23.09■■□□□ 1.29
APOC3-202ENST00000375345 BCANQ96GW7 911 aa23.09■■□□□ 1.29
APOC3-202ENST00000375345 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
APOC3-202ENST00000375345 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
APOC3-202ENST00000375345 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
APOC3-202ENST00000375345 FAM135BQ49AJ0 1406 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms