RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 POLR1AO95602 1720 aaPredicted RBP34.67■■■■□ 3.14
PCMT1-201ENST00000367378 KIF3BO15066 747 aa34.67■■■■□ 3.14
PCMT1-201ENST00000367378 CCDC141Q6ZP82 1450 aa34.65■■■■□ 3.14
PCMT1-201ENST00000367378 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
PCMT1-201ENST00000367378 TNRQ92752 1358 aa34.64■■■■□ 3.14
PCMT1-201ENST00000367378 NEURL4Q96JN8 1562 aa34.64■■■■□ 3.14
PCMT1-201ENST00000367378 KDM5DQ9BY66 1539 aa34.63■■■■□ 3.13
PCMT1-201ENST00000367378 PZPP20742 1482 aa34.62■■■■□ 3.13
PCMT1-201ENST00000367378 NCOA2Q15596 1464 aa34.62■■■■□ 3.13
PCMT1-201ENST00000367378 FAM135AQ9P2D6 1515 aa34.58■■■■□ 3.13
PCMT1-201ENST00000367378 WASHC2CQ9Y4E1 1318 aa34.56■■■■□ 3.12
PCMT1-201ENST00000367378 RSPH4AQ5TD94 716 aa34.54■■■■□ 3.12
PCMT1-201ENST00000367378 SHANK2Q9UPX8 1470 aa34.52■■■■□ 3.12
PCMT1-201ENST00000367378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.52■■■■□ 3.12
PCMT1-201ENST00000367378 CPS1P31327 1500 aa34.52■■■■□ 3.12
PCMT1-201ENST00000367378 ARHGEF5Q12774 1597 aa34.51■■■■□ 3.12
PCMT1-201ENST00000367378 MIA2Q96PC5 1412 aa34.5■■■■□ 3.11
PCMT1-201ENST00000367378 PIP4K2BP78356 416 aa34.47■■■■□ 3.11
PCMT1-201ENST00000367378 ANKLE2Q86XL3 938 aa34.47■■■■□ 3.11
PCMT1-201ENST00000367378 VWDEQ8N2E2 1590 aa34.47■■■■□ 3.11
PCMT1-201ENST00000367378 SCAF1Q9H7N4 1312 aaKnown RBP34.47■■■■□ 3.11
PCMT1-201ENST00000367378 NLRP1Q9C000 1473 aa34.46■■■■□ 3.11
PCMT1-201ENST00000367378 UGGT1Q9NYU2 1555 aa34.46■■■■□ 3.11
PCMT1-201ENST00000367378 HSPA1LP34931 641 aa34.46■■■■□ 3.11
PCMT1-201ENST00000367378 THEMISQ8N1K5 641 aaPredicted RBP34.45■■■■□ 3.11
PCMT1-201ENST00000367378 TSPY4P0CV99 314 aa34.44■■■■□ 3.1
PCMT1-201ENST00000367378 TSPY10P0CW01 314 aa34.44■■■■□ 3.1
PCMT1-201ENST00000367378 TOM1O60784 492 aa34.43■■■■□ 3.1
PCMT1-201ENST00000367378 DEPDC5O75140 1603 aa34.42■■■■□ 3.1
PCMT1-201ENST00000367378 RNF17Q9BXT8 1623 aaKnown RBP34.41■■■■□ 3.1
PCMT1-201ENST00000367378 MED14O60244 1454 aa34.41■■■■□ 3.1
PCMT1-201ENST00000367378 NPHP4O75161 1426 aaPredicted RBP34.4■■■■□ 3.1
PCMT1-201ENST00000367378 MED1Q15648 1581 aaPredicted RBP34.38■■■■□ 3.09
PCMT1-201ENST00000367378 ABCC3O15438 1527 aa34.37■■■■□ 3.09
PCMT1-201ENST00000367378 MAST1Q9Y2H9 1570 aa34.36■■■■□ 3.09
PCMT1-201ENST00000367378 IQGAP1P46940 1657 aa34.36■■■■□ 3.09
PCMT1-201ENST00000367378 ALKQ9UM73 1620 aa34.36■■■■□ 3.09
PCMT1-201ENST00000367378 ZC3H13Q5T200 1668 aaKnown RBP34.35■■■■□ 3.09
PCMT1-201ENST00000367378 LRRC9Q6ZRR7 1453 aa34.34■■■■□ 3.09
PCMT1-201ENST00000367378 STRCP1A6NGW2 1772 aa34.33■■■■□ 3.09
PCMT1-201ENST00000367378 EIF2AK4Q9P2K8 1649 aaKnown RBP34.31■■■■□ 3.08
PCMT1-201ENST00000367378 MROH1Q8NDA8 1641 aa34.3■■■■□ 3.08
PCMT1-201ENST00000367378 CFAP65Q6ZU64 1925 aaKnown RBP34.3■■■■□ 3.08
PCMT1-201ENST00000367378 ERVK-7P63135 1459 aa34.28■■■■□ 3.08
PCMT1-201ENST00000367378 CEP152O94986 1710 aa34.28■■■■□ 3.08
PCMT1-201ENST00000367378 VPS8Q8N3P4 1428 aa34.27■■■■□ 3.08
PCMT1-201ENST00000367378 KANK4Q5T7N3 995 aaPredicted RBP34.23■■■■□ 3.07
PCMT1-201ENST00000367378 UBR1Q8IWV7 1749 aa34.23■■■■□ 3.07
PCMT1-201ENST00000367378 LRRC7Q96NW7 1537 aa34.22■■■■□ 3.07
PCMT1-201ENST00000367378 MYOM3Q5VTT5 1437 aa34.18■■■■□ 3.06
PCMT1-201ENST00000367378 SYNMO15061 1565 aa34.18■■■■□ 3.06
PCMT1-201ENST00000367378 DUOX2Q9NRD8 1548 aa34.16■■■■□ 3.06
PCMT1-201ENST00000367378 MAP3K1Q13233 1512 aa34.14■■■■□ 3.06
PCMT1-201ENST00000367378 LOC105371045A0A1W2PR82 267 aa34.14■■■■□ 3.06
PCMT1-201ENST00000367378 SENP3Q9H4L4 574 aaPredicted RBP34.12■■■■□ 3.05
PCMT1-201ENST00000367378 SCAF11Q99590 1463 aaKnown RBP34.11■■■■□ 3.05
PCMT1-201ENST00000367378 LTKP29376 864 aa34.09■■■■□ 3.05
PCMT1-201ENST00000367378 ARHGAP23Q9P227 1491 aa34.08■■■■□ 3.05
PCMT1-201ENST00000367378 PRDM15P57071 1507 aaPredicted RBP34.08■■■■□ 3.05
PCMT1-201ENST00000367378 CROCC2H7BZ55 1655 aa34.07■■■■□ 3.04
PCMT1-201ENST00000367378 SLIT1O75093 1534 aa34.07■■■■□ 3.04
PCMT1-201ENST00000367378 PHF23Q9BUL5 403 aaPredicted RBP34.06■■■■□ 3.04
PCMT1-201ENST00000367378 ARHGAP31Q2M1Z3 1444 aa34.05■■■■□ 3.04
PCMT1-201ENST00000367378 XIRP1Q702N8 1843 aaKnown RBP34.05■■■■□ 3.04
PCMT1-201ENST00000367378 KIF15Q9NS87 1388 aa34.05■■■■□ 3.04
PCMT1-201ENST00000367378 TXNDC2Q86VQ3 553 aa34.04■■■■□ 3.04
PCMT1-201ENST00000367378 ABCC5O15440 1437 aa34.02■■■■□ 3.04
PCMT1-201ENST00000367378 RRP7BPQ9NSQ0 103 aa34.01■■■■□ 3.03
PCMT1-201ENST00000367378 ERBINQ96RT1 1412 aa34.01■■■■□ 3.03
PCMT1-201ENST00000367378 PIK3C2BO00750 1634 aa34.01■■■■□ 3.03
PCMT1-201ENST00000367378 PTPN23Q9H3S7 1636 aa33.98■■■■□ 3.03
PCMT1-201ENST00000367378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.97■■■■□ 3.033e-9■■■■■ 29.8
PCMT1-201ENST00000367378 EID1Q9Y6B2 187 aa33.94■■■■□ 3.02
PCMT1-201ENST00000367378 TMEM2Q9UHN6 1383 aa33.92■■■■□ 3.02
PCMT1-201ENST00000367378 DAPK1P53355 1430 aa33.92■■■■□ 3.02
PCMT1-201ENST00000367378 KDM5AP29375 1690 aaKnown RBP33.87■■■■□ 3.01
PCMT1-201ENST00000367378 KANK1Q14678 1352 aa33.86■■■■□ 3.01
PCMT1-201ENST00000367378 STAG3Q9UJ98 1225 aa33.86■■■■□ 3.01
PCMT1-201ENST00000367378 EFCAB6Q5THR3 1501 aa33.85■■■■□ 3.01
PCMT1-201ENST00000367378 IDI1Q13907 227 aa33.85■■■■□ 3.01
PCMT1-201ENST00000367378 LMTK2Q8IWU2 1503 aa33.84■■■■□ 3.01
PCMT1-201ENST00000367378 RGS17Q9UGC6 210 aaPredicted RBP33.84■■■■□ 3.01
PCMT1-201ENST00000367378 FGD6Q6ZV73 1430 aa33.82■■■■□ 3
PCMT1-201ENST00000367378 CHIC2Q9UKJ5 165 aa33.82■■■■□ 3
PCMT1-201ENST00000367378 TET3O43151 1660 aa33.8■■■■□ 3
PCMT1-201ENST00000367378 TMEM94Q12767 1356 aa33.8■■■■□ 3
PCMT1-201ENST00000367378 FAM135BQ49AJ0 1406 aa33.79■■■■□ 3
PCMT1-201ENST00000367378 ANKRD30AQ9BXX3 1397 aa33.78■■■■□ 3
PCMT1-201ENST00000367378 SLC26A8Q96RN1 970 aa33.78■■■■□ 3
PCMT1-201ENST00000367378 KCNA6P17658 529 aa33.77■■■■□ 3
PCMT1-201ENST00000367378 APLP2Q06481 763 aa33.76■■■□□ 2.99
PCMT1-201ENST00000367378 NOS1P29475 1434 aa33.75■■■□□ 2.99
PCMT1-201ENST00000367378 RBM33Q96EV2 1170 aaKnown RBP33.74■■■□□ 2.99
PCMT1-201ENST00000367378 ROBO1Q9Y6N7 1651 aa33.73■■■□□ 2.99
PCMT1-201ENST00000367378 ADGRB3O60242 1522 aa33.73■■■□□ 2.99
PCMT1-201ENST00000367378 PROSER2Q86WR7 435 aaPredicted RBP33.71■■■□□ 2.99
PCMT1-201ENST00000367378 NWD1Q149M9 1564 aa33.68■■■□□ 2.98
PCMT1-201ENST00000367378 MYO5BQ9ULV0 1848 aa33.65■■■□□ 2.98
PCMT1-201ENST00000367378 ADGRL2O95490 1459 aa33.64■■■□□ 2.98
PCMT1-201ENST00000367378 SLC52A1Q9NWF4 448 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms