RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
PDGFA-201ENST00000354513 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
PDGFA-201ENST00000354513 A2ML1A8K2U0 1454 aa25.36■■□□□ 1.65
PDGFA-201ENST00000354513 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
PDGFA-201ENST00000354513 PZPP20742 1482 aa25.35■■□□□ 1.65
PDGFA-201ENST00000354513 CROCC2H7BZ55 1655 aa25.35■■□□□ 1.65
PDGFA-201ENST00000354513 EIF2AK4Q9P2K8 1649 aaKnown RBP25.35■■□□□ 1.65
PDGFA-201ENST00000354513 IQSEC2Q5JU85 1478 aa25.34■■□□□ 1.65
PDGFA-201ENST00000354513 NCKAP5LQ9HCH0 1330 aa25.34■■□□□ 1.65
PDGFA-201ENST00000354513 NEURL4Q96JN8 1562 aa25.34■■□□□ 1.65
PDGFA-201ENST00000354513 ZC3H13Q5T200 1668 aaKnown RBP25.34■■□□□ 1.65
PDGFA-201ENST00000354513 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
PDGFA-201ENST00000354513 CEP152O94986 1710 aa25.31■■□□□ 1.64
PDGFA-201ENST00000354513 KIF3BO15066 747 aa25.31■■□□□ 1.64
PDGFA-201ENST00000354513 RSPH4AQ5TD94 716 aa25.3■■□□□ 1.64
PDGFA-201ENST00000354513 MYOM3Q5VTT5 1437 aa25.3■■□□□ 1.64
PDGFA-201ENST00000354513 ABCC3O15438 1527 aa25.27■■□□□ 1.64
PDGFA-201ENST00000354513 MIA2Q96PC5 1412 aa25.26■■□□□ 1.63
PDGFA-201ENST00000354513 TNRQ92752 1358 aa25.26■■□□□ 1.63
PDGFA-201ENST00000354513 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
PDGFA-201ENST00000354513 ZNF335Q9H4Z2 1342 aaPredicted RBP25.25■■□□□ 1.63
PDGFA-201ENST00000354513 SPATA31D1Q6ZQQ2 1576 aa25.23■■□□□ 1.63
PDGFA-201ENST00000354513 PTPN23Q9H3S7 1636 aa25.22■■□□□ 1.63
PDGFA-201ENST00000354513 PKD2Q13563 968 aa25.22■■□□□ 1.63
PDGFA-201ENST00000354513 CFAP65Q6ZU64 1925 aaKnown RBP25.19■■□□□ 1.62
PDGFA-201ENST00000354513 DEPDC5O75140 1603 aa25.19■■□□□ 1.62
PDGFA-201ENST00000354513 TSPY4P0CV99 314 aa25.18■■□□□ 1.62
PDGFA-201ENST00000354513 TSPY10P0CW01 314 aa25.18■■□□□ 1.62
PDGFA-201ENST00000354513 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
PDGFA-201ENST00000354513 NLRP1Q9C000 1473 aa25.18■■□□□ 1.62
PDGFA-201ENST00000354513 WASHC2CQ9Y4E1 1318 aa25.18■■□□□ 1.62
PDGFA-201ENST00000354513 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
PDGFA-201ENST00000354513 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
PDGFA-201ENST00000354513 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
PDGFA-201ENST00000354513 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
PDGFA-201ENST00000354513 VWDEQ8N2E2 1590 aa25.15■■□□□ 1.62
PDGFA-201ENST00000354513 ERVK-7P63135 1459 aa25.14■■□□□ 1.62
PDGFA-201ENST00000354513 ABCC5O15440 1437 aa25.13■■□□□ 1.61
PDGFA-201ENST00000354513 IQGAP1P46940 1657 aa25.13■■□□□ 1.61
PDGFA-201ENST00000354513 STRCP1A6NGW2 1772 aa25.13■■□□□ 1.61
PDGFA-201ENST00000354513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.11■■□□□ 1.612e-6■■■■□ 19.8
PDGFA-201ENST00000354513 MED14O60244 1454 aa25.1■■□□□ 1.61
PDGFA-201ENST00000354513 DAPK1P53355 1430 aa25.08■■□□□ 1.61
PDGFA-201ENST00000354513 FGD6Q6ZV73 1430 aa25.07■■□□□ 1.6
PDGFA-201ENST00000354513 CPS1P31327 1500 aa25.07■■□□□ 1.6
PDGFA-201ENST00000354513 ERBINQ96RT1 1412 aa25.06■■□□□ 1.6
PDGFA-201ENST00000354513 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
PDGFA-201ENST00000354513 ALKQ9UM73 1620 aa25.04■■□□□ 1.6
PDGFA-201ENST00000354513 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
PDGFA-201ENST00000354513 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
PDGFA-201ENST00000354513 ARHGAP31Q2M1Z3 1444 aa25■■□□□ 1.59
PDGFA-201ENST00000354513 DISP3Q9P2K9 1392 aa25■■□□□ 1.59
PDGFA-201ENST00000354513 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
PDGFA-201ENST00000354513 THEMISQ8N1K5 641 aaPredicted RBP24.99■■□□□ 1.59
PDGFA-201ENST00000354513 ANKLE2Q86XL3 938 aa24.98■■□□□ 1.59
PDGFA-201ENST00000354513 ILDR2Q71H61 639 aa24.97■■□□□ 1.59
PDGFA-201ENST00000354513 SYNMO15061 1565 aa24.97■■□□□ 1.59
PDGFA-201ENST00000354513 SLIT1O75093 1534 aa24.96■■□□□ 1.59
PDGFA-201ENST00000354513 LMTK2Q8IWU2 1503 aa24.96■■□□□ 1.59
PDGFA-201ENST00000354513 ARHGAP23Q9P227 1491 aa24.96■■□□□ 1.59
PDGFA-201ENST00000354513 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
PDGFA-201ENST00000354513 XIRP1Q702N8 1843 aaKnown RBP24.95■■□□□ 1.59
PDGFA-201ENST00000354513 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
PDGFA-201ENST00000354513 ADGRL2O95490 1459 aa24.94■■□□□ 1.58
PDGFA-201ENST00000354513 SCAF11Q99590 1463 aaKnown RBP24.91■■□□□ 1.58
PDGFA-201ENST00000354513 EFCAB6Q5THR3 1501 aa24.91■■□□□ 1.58
PDGFA-201ENST00000354513 APLP2Q06481 763 aa24.89■■□□□ 1.58
PDGFA-201ENST00000354513 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.58
PDGFA-201ENST00000354513 ANKRD30AQ9BXX3 1397 aa24.87■■□□□ 1.57
PDGFA-201ENST00000354513 MYO5BQ9ULV0 1848 aa24.86■■□□□ 1.57
PDGFA-201ENST00000354513 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
PDGFA-201ENST00000354513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.84■■□□□ 1.57
PDGFA-201ENST00000354513 LTKP29376 864 aa24.83■■□□□ 1.56
PDGFA-201ENST00000354513 MED1Q15648 1581 aaPredicted RBP24.82■■□□□ 1.56
PDGFA-201ENST00000354513 TET3O43151 1660 aa24.82■■□□□ 1.56
PDGFA-201ENST00000354513 NOS1P29475 1434 aa24.81■■□□□ 1.56
PDGFA-201ENST00000354513 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
PDGFA-201ENST00000354513 UNC13BO14795 1591 aa24.81■■□□□ 1.56
PDGFA-201ENST00000354513 GCC2Q8IWJ2 1684 aa24.81■■□□□ 1.56
PDGFA-201ENST00000354513 KANK1Q14678 1352 aa24.81■■□□□ 1.56
PDGFA-201ENST00000354513 HSPA1LP34931 641 aa24.79■■□□□ 1.56
PDGFA-201ENST00000354513 PIP4K2BP78356 416 aa24.78■■□□□ 1.56
PDGFA-201ENST00000354513 TMEM2Q9UHN6 1383 aa24.77■■□□□ 1.56
PDGFA-201ENST00000354513 TOM1O60784 492 aa24.76■■□□□ 1.55
PDGFA-201ENST00000354513 E9PCH4 1651 aa24.74■■□□□ 1.55
PDGFA-201ENST00000354513 SCAF1Q9H7N4 1312 aaKnown RBP24.74■■□□□ 1.55
PDGFA-201ENST00000354513 TXNDC2Q86VQ3 553 aa24.74■■□□□ 1.55
PDGFA-201ENST00000354513 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
PDGFA-201ENST00000354513 SOCS7O14512 581 aa24.73■■□□□ 1.55
PDGFA-201ENST00000354513 RPRD2Q5VT52 1461 aaKnown RBP24.72■■□□□ 1.55
PDGFA-201ENST00000354513 IDI1Q13907 227 aa24.72■■□□□ 1.55
PDGFA-201ENST00000354513 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
PDGFA-201ENST00000354513 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
PDGFA-201ENST00000354513 TMEM131LA2VDJ0 1609 aa24.7■■□□□ 1.55
PDGFA-201ENST00000354513 IQGAP3Q86VI3 1631 aa24.7■■□□□ 1.54
PDGFA-201ENST00000354513 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
PDGFA-201ENST00000354513 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
PDGFA-201ENST00000354513 EID1Q9Y6B2 187 aa24.64■■□□□ 1.54
PDGFA-201ENST00000354513 STAG3Q9UJ98 1225 aa24.61■■□□□ 1.53
PDGFA-201ENST00000354513 ROCK1Q13464 1354 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms