RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 DNMT1P26358 1616 aaKnown RBP29.78■■■□□ 2.36
KDM5C-201ENST00000349663 TNRQ92752 1358 aa29.77■■■□□ 2.36
KDM5C-201ENST00000349663 RSPH4AQ5TD94 716 aa29.77■■■□□ 2.36
KDM5C-201ENST00000349663 WASHC2CQ9Y4E1 1318 aa29.75■■■□□ 2.35
KDM5C-201ENST00000349663 TOM1O60784 492 aa29.71■■■□□ 2.35
KDM5C-201ENST00000349663 ANKLE2Q86XL3 938 aa29.71■■■□□ 2.35
KDM5C-201ENST00000349663 PZPP20742 1482 aa29.71■■■□□ 2.35
KDM5C-201ENST00000349663 CCDC141Q6ZP82 1450 aa29.71■■■□□ 2.35
KDM5C-201ENST00000349663 SCAF1Q9H7N4 1312 aaKnown RBP29.71■■■□□ 2.35
KDM5C-201ENST00000349663 THEMISQ8N1K5 641 aaPredicted RBP29.7■■■□□ 2.35
KDM5C-201ENST00000349663 PIP4K2BP78356 416 aa29.69■■■□□ 2.34
KDM5C-201ENST00000349663 KDM5DQ9BY66 1539 aa29.69■■■□□ 2.34
KDM5C-201ENST00000349663 SHANK2Q9UPX8 1470 aa29.68■■■□□ 2.34
KDM5C-201ENST00000349663 FAM135AQ9P2D6 1515 aa29.67■■■□□ 2.34
KDM5C-201ENST00000349663 HSPA1LP34931 641 aa29.67■■■□□ 2.34
KDM5C-201ENST00000349663 CPS1P31327 1500 aa29.66■■■□□ 2.34
KDM5C-201ENST00000349663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.66■■■□□ 2.34
KDM5C-201ENST00000349663 MIA2Q96PC5 1412 aa29.66■■■□□ 2.34
KDM5C-201ENST00000349663 TSPY4P0CV99 314 aa29.66■■■□□ 2.34
KDM5C-201ENST00000349663 TSPY10P0CW01 314 aa29.66■■■□□ 2.34
KDM5C-201ENST00000349663 CAMSAP2Q08AD1 1489 aa29.65■■■□□ 2.34
KDM5C-201ENST00000349663 NCOA2Q15596 1464 aa29.65■■■□□ 2.34
KDM5C-201ENST00000349663 NEURL4Q96JN8 1562 aa29.64■■■□□ 2.34
KDM5C-201ENST00000349663 POLR1AO95602 1720 aaPredicted RBP29.62■■■□□ 2.33
KDM5C-201ENST00000349663 NLRP1Q9C000 1473 aa29.61■■■□□ 2.33
KDM5C-201ENST00000349663 UGGT1Q9NYU2 1555 aa29.57■■■□□ 2.32
KDM5C-201ENST00000349663 NPHP4O75161 1426 aaPredicted RBP29.56■■■□□ 2.32
KDM5C-201ENST00000349663 MED14O60244 1454 aa29.55■■■□□ 2.32
KDM5C-201ENST00000349663 ARHGEF5Q12774 1597 aa29.54■■■□□ 2.32
KDM5C-201ENST00000349663 VWDEQ8N2E2 1590 aa29.53■■■□□ 2.32
KDM5C-201ENST00000349663 DEPDC5O75140 1603 aa29.5■■■□□ 2.31
KDM5C-201ENST00000349663 MED1Q15648 1581 aaPredicted RBP29.49■■■□□ 2.31
KDM5C-201ENST00000349663 ABCC3O15438 1527 aa29.44■■■□□ 2.3
KDM5C-201ENST00000349663 RNF17Q9BXT8 1623 aaKnown RBP29.42■■■□□ 2.3
KDM5C-201ENST00000349663 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
KDM5C-201ENST00000349663 IQGAP1P46940 1657 aa29.41■■■□□ 2.3
KDM5C-201ENST00000349663 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
KDM5C-201ENST00000349663 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.3
KDM5C-201ENST00000349663 ALKQ9UM73 1620 aa29.39■■■□□ 2.3
KDM5C-201ENST00000349663 ERVK-7P63135 1459 aa29.39■■■□□ 2.3
KDM5C-201ENST00000349663 ZC3H13Q5T200 1668 aaKnown RBP29.37■■■□□ 2.29
KDM5C-201ENST00000349663 LRRC7Q96NW7 1537 aa29.37■■■□□ 2.29
KDM5C-201ENST00000349663 EIF2AK4Q9P2K8 1649 aaKnown RBP29.34■■■□□ 2.29
KDM5C-201ENST00000349663 KANK4Q5T7N3 995 aaPredicted RBP29.34■■■□□ 2.29
KDM5C-201ENST00000349663 SENP3Q9H4L4 574 aaPredicted RBP29.34■■■□□ 2.29
KDM5C-201ENST00000349663 VPS8Q8N3P4 1428 aa29.34■■■□□ 2.29
KDM5C-201ENST00000349663 STRCP1A6NGW2 1772 aa29.31■■■□□ 2.28
KDM5C-201ENST00000349663 TXNDC2Q86VQ3 553 aa29.31■■■□□ 2.28
KDM5C-201ENST00000349663 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
KDM5C-201ENST00000349663 LTKP29376 864 aa29.3■■■□□ 2.28
KDM5C-201ENST00000349663 MROH1Q8NDA8 1641 aa29.3■■■□□ 2.28
KDM5C-201ENST00000349663 SCAF11Q99590 1463 aaKnown RBP29.29■■■□□ 2.28
KDM5C-201ENST00000349663 DUOX2Q9NRD8 1548 aa29.28■■■□□ 2.28
KDM5C-201ENST00000349663 SYNMO15061 1565 aa29.27■■■□□ 2.28
KDM5C-201ENST00000349663 UBR1Q8IWV7 1749 aa29.26■■■□□ 2.27
KDM5C-201ENST00000349663 CFAP65Q6ZU64 1925 aaKnown RBP29.26■■■□□ 2.27
KDM5C-201ENST00000349663 EID1Q9Y6B2 187 aa29.26■■■□□ 2.27
KDM5C-201ENST00000349663 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
KDM5C-201ENST00000349663 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
KDM5C-201ENST00000349663 CEP152O94986 1710 aa29.24■■■□□ 2.27
KDM5C-201ENST00000349663 ARHGAP31Q2M1Z3 1444 aa29.24■■■□□ 2.27
KDM5C-201ENST00000349663 ARHGAP23Q9P227 1491 aa29.23■■■□□ 2.27
KDM5C-201ENST00000349663 RRP7BPQ9NSQ0 103 aa29.23■■■□□ 2.27
KDM5C-201ENST00000349663 KIF15Q9NS87 1388 aa29.23■■■□□ 2.27
KDM5C-201ENST00000349663 SLIT1O75093 1534 aa29.22■■■□□ 2.27
KDM5C-201ENST00000349663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.273e-7■■□□□ 13.1
KDM5C-201ENST00000349663 STAG3Q9UJ98 1225 aa29.18■■■□□ 2.26
KDM5C-201ENST00000349663 ERBINQ96RT1 1412 aa29.18■■■□□ 2.26
KDM5C-201ENST00000349663 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
KDM5C-201ENST00000349663 TMEM2Q9UHN6 1383 aa29.15■■■□□ 2.26
KDM5C-201ENST00000349663 ABCC5O15440 1437 aa29.15■■■□□ 2.26
KDM5C-201ENST00000349663 KANK1Q14678 1352 aa29.13■■■□□ 2.25
KDM5C-201ENST00000349663 RGS17Q9UGC6 210 aaPredicted RBP29.11■■■□□ 2.25
KDM5C-201ENST00000349663 IDI1Q13907 227 aa29.1■■■□□ 2.25
KDM5C-201ENST00000349663 FAM135BQ49AJ0 1406 aa29.09■■■□□ 2.25
KDM5C-201ENST00000349663 PIK3C2BO00750 1634 aa29.08■■■□□ 2.25
KDM5C-201ENST00000349663 KCNA6P17658 529 aa29.07■■■□□ 2.24
KDM5C-201ENST00000349663 APLP2Q06481 763 aa29.07■■■□□ 2.24
KDM5C-201ENST00000349663 DAPK1P53355 1430 aa29.06■■■□□ 2.24
KDM5C-201ENST00000349663 TMEM94Q12767 1356 aa29.06■■■□□ 2.24
KDM5C-201ENST00000349663 XIRP1Q702N8 1843 aaKnown RBP29.06■■■□□ 2.24
KDM5C-201ENST00000349663 SLC26A8Q96RN1 970 aa29.04■■■□□ 2.24
KDM5C-201ENST00000349663 CHIC2Q9UKJ5 165 aa29.04■■■□□ 2.24
KDM5C-201ENST00000349663 PTPN23Q9H3S7 1636 aa29.04■■■□□ 2.24
KDM5C-201ENST00000349663 EFCAB6Q5THR3 1501 aa29.04■■■□□ 2.24
KDM5C-201ENST00000349663 CROCC2H7BZ55 1655 aa29.03■■■□□ 2.24
KDM5C-201ENST00000349663 PROSER2Q86WR7 435 aaPredicted RBP29.03■■■□□ 2.24
KDM5C-201ENST00000349663 ANKRD30AQ9BXX3 1397 aa29.02■■■□□ 2.24
KDM5C-201ENST00000349663 LMTK2Q8IWU2 1503 aa29■■■□□ 2.23
KDM5C-201ENST00000349663 KDM5AP29375 1690 aaKnown RBP28.99■■■□□ 2.23
KDM5C-201ENST00000349663 RBM33Q96EV2 1170 aaKnown RBP28.98■■■□□ 2.23
KDM5C-201ENST00000349663 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
KDM5C-201ENST00000349663 TET3O43151 1660 aa28.97■■■□□ 2.23
KDM5C-201ENST00000349663 SLC52A1Q9NWF4 448 aa28.97■■■□□ 2.23
KDM5C-201ENST00000349663 BCANQ96GW7 911 aa28.96■■■□□ 2.23
KDM5C-201ENST00000349663 NOS1P29475 1434 aa28.94■■■□□ 2.22
KDM5C-201ENST00000349663 POTEAQ6S8J7 498 aa28.93■■■□□ 2.22
KDM5C-201ENST00000349663 ROBO1Q9Y6N7 1651 aa28.89■■■□□ 2.21
KDM5C-201ENST00000349663 SLAIN2Q9P270 581 aa28.88■■■□□ 2.21
KDM5C-201ENST00000349663 NKTRP30414 1462 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms