RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 NISCHQ9Y2I1 1504 aa46.87■■■■■ 5.09
KDM5C-201ENST00000349663 ABCC9O60706 1549 aa42.62■■■■■ 4.41
KDM5C-201ENST00000349663 CCDC180Q9P1Z9 1646 aa42.13■■■■■ 4.34
KDM5C-201ENST00000349663 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
KDM5C-201ENST00000349663 RB1CC1Q8TDY2 1594 aa40.37■■■■■ 4.05
KDM5C-201ENST00000349663 NACADO15069 1562 aa40.01■■■■□ 3.99
KDM5C-201ENST00000349663 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
KDM5C-201ENST00000349663 PABPN1Q86U42 306 aaKnown RBP eCLIP39.7■■■■□ 3.95
KDM5C-201ENST00000349663 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
KDM5C-201ENST00000349663 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
KDM5C-201ENST00000349663 BICRAQ9NZM4 1560 aa39.18■■■■□ 3.86
KDM5C-201ENST00000349663 ZCCHC6Q5VYS8 1495 aaKnown RBP38.73■■■■□ 3.79
KDM5C-201ENST00000349663 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
KDM5C-201ENST00000349663 SHROOM4Q9ULL8 1493 aa38.64■■■■□ 3.78
KDM5C-201ENST00000349663 CECR2Q9BXF3 1484 aa38.45■■■■□ 3.75
KDM5C-201ENST00000349663 CC2D2AQ9P2K1 1620 aa38.44■■■■□ 3.74
KDM5C-201ENST00000349663 SCRIBQ14160 1630 aa38.41■■■■□ 3.74
KDM5C-201ENST00000349663 EIF4G1Q04637 1599 aaKnown RBP38.27■■■■□ 3.72
KDM5C-201ENST00000349663 DNAJC5Q9H3Z4 198 aa37.42■■■■□ 3.58
KDM5C-201ENST00000349663 NCAPD3P42695 1498 aa36.99■■■■□ 3.51
KDM5C-201ENST00000349663 CUX2O14529 1486 aa36.89■■■■□ 3.5
KDM5C-201ENST00000349663 ERCC6Q03468 1493 aa36.85■■■■□ 3.49
KDM5C-201ENST00000349663 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
KDM5C-201ENST00000349663 SMARCA2P51531 1590 aa36.65■■■■□ 3.46
KDM5C-201ENST00000349663 HMGXB3Q12766 1538 aa36.6■■■■□ 3.45
KDM5C-201ENST00000349663 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
KDM5C-201ENST00000349663 NESP48681 1621 aa36.49■■■■□ 3.43
KDM5C-201ENST00000349663 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
KDM5C-201ENST00000349663 BAZ1AQ9NRL2 1556 aaPredicted RBP36.4■■■■□ 3.42
KDM5C-201ENST00000349663 PEG3Q9GZU2 1588 aa36.26■■■■□ 3.39
KDM5C-201ENST00000349663 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
KDM5C-201ENST00000349663 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
KDM5C-201ENST00000349663 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
KDM5C-201ENST00000349663 PDS5BQ9NTI5 1447 aa36.04■■■■□ 3.36
KDM5C-201ENST00000349663 KIF21AQ7Z4S6 1674 aa35.92■■■■□ 3.34
KDM5C-201ENST00000349663 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
KDM5C-201ENST00000349663 MRC2Q9UBG0 1479 aa35.7■■■■□ 3.31
KDM5C-201ENST00000349663 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
KDM5C-201ENST00000349663 WIZO95785 1651 aa35.61■■■■□ 3.29
KDM5C-201ENST00000349663 WDR62O43379 1518 aa35.58■■■■□ 3.29
KDM5C-201ENST00000349663 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
KDM5C-201ENST00000349663 FANCD2Q9BXW9 1451 aa35.42■■■■□ 3.26
KDM5C-201ENST00000349663 CFTRP13569 1480 aa35.34■■■■□ 3.25
KDM5C-201ENST00000349663 OSCARQ8IYS5 282 aa35.26■■■■□ 3.24
KDM5C-201ENST00000349663 RSF1Q96T23 1441 aaPredicted RBP35.25■■■■□ 3.23
KDM5C-201ENST00000349663 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
KDM5C-201ENST00000349663 URB2Q14146 1524 aaKnown RBP35.13■■■■□ 3.21
KDM5C-201ENST00000349663 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
KDM5C-201ENST00000349663 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
KDM5C-201ENST00000349663 PRDM2Q13029 1718 aa34.79■■■■□ 3.16
KDM5C-201ENST00000349663 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
KDM5C-201ENST00000349663 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
KDM5C-201ENST00000349663 RIMBP3CA6NJZ7 1639 aa34.69■■■■□ 3.14
KDM5C-201ENST00000349663 RIMBP3BA6NNM3 1639 aa34.69■■■■□ 3.14
KDM5C-201ENST00000349663 RIMBP3Q9UFD9 1639 aa34.69■■■■□ 3.14
KDM5C-201ENST00000349663 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
KDM5C-201ENST00000349663 ARHGEF11O15085 1522 aa34.56■■■■□ 3.12
KDM5C-201ENST00000349663 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
KDM5C-201ENST00000349663 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
KDM5C-201ENST00000349663 CYB5RLQ6IPT4 315 aa34.46■■■■□ 3.11
KDM5C-201ENST00000349663 AQRO60306 1485 aaKnown RBP eCLIP34.45■■■■□ 3.1
KDM5C-201ENST00000349663 TARBP1Q13395 1621 aaKnown RBP34.37■■■■□ 3.09
KDM5C-201ENST00000349663 FBLN2P98095 1184 aa34.37■■■■□ 3.09
KDM5C-201ENST00000349663 POLA1P09884 1462 aaPredicted RBP34.31■■■■□ 3.08
KDM5C-201ENST00000349663 CHD1O14646 1710 aa34.28■■■■□ 3.08
KDM5C-201ENST00000349663 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
KDM5C-201ENST00000349663 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
KDM5C-201ENST00000349663 SOGA1O94964 1423 aa34.21■■■■□ 3.07
KDM5C-201ENST00000349663 ARAP1Q96P48 1450 aa34.2■■■■□ 3.07
KDM5C-201ENST00000349663 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
KDM5C-201ENST00000349663 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
KDM5C-201ENST00000349663 SNAPC4Q5SXM2 1469 aa34.04■■■■□ 3.04
KDM5C-201ENST00000349663 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
KDM5C-201ENST00000349663 WDR97A6NE52 1622 aa33.99■■■■□ 3.03
KDM5C-201ENST00000349663 MAGI1Q96QZ7 1491 aaPredicted RBP33.95■■■■□ 3.02
KDM5C-201ENST00000349663 CUX1P39880 1505 aa33.94■■■■□ 3.02
KDM5C-201ENST00000349663 CLASP1Q7Z460 1538 aa33.93■■■■□ 3.02
KDM5C-201ENST00000349663 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
KDM5C-201ENST00000349663 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
KDM5C-201ENST00000349663 SYNJ2O15056 1496 aa33.84■■■■□ 3.01
KDM5C-201ENST00000349663 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
KDM5C-201ENST00000349663 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
KDM5C-201ENST00000349663 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
KDM5C-201ENST00000349663 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
KDM5C-201ENST00000349663 AEBP2Q6ZN18 517 aaPredicted RBP33.51■■■□□ 2.95
KDM5C-201ENST00000349663 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
KDM5C-201ENST00000349663 WRNQ14191 1432 aaPredicted RBP eCLIP33.47■■■□□ 2.95
KDM5C-201ENST00000349663 GRIN2AQ12879 1464 aa33.46■■■□□ 2.95
KDM5C-201ENST00000349663 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
KDM5C-201ENST00000349663 NUP160Q12769 1436 aa33.37■■■□□ 2.93
KDM5C-201ENST00000349663 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
KDM5C-201ENST00000349663 FHAD1B1AJZ9 1412 aa33.32■■■□□ 2.92
KDM5C-201ENST00000349663 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
KDM5C-201ENST00000349663 TOP2BQ02880 1626 aa33.27■■■□□ 2.92
KDM5C-201ENST00000349663 BIVM-ERCC5R4GMW8 1640 aa33.24■■■□□ 2.91
KDM5C-201ENST00000349663 SHROOM2Q13796 1616 aa33.2■■■□□ 2.91
KDM5C-201ENST00000349663 ERICH3Q5RHP9 1530 aa33.2■■■□□ 2.91
KDM5C-201ENST00000349663 JPH4Q96JJ6 628 aa33.13■■■□□ 2.89
KDM5C-201ENST00000349663 PRG4Q92954 1404 aaPredicted RBP33.12■■■□□ 2.89
KDM5C-201ENST00000349663 NPM1P06748 294 aaKnown RBP eCLIP32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms