RNA–Protein interactions for RNA: ENST00000339877.8

RBPMS-203, Transcript of RNA binding protein, mRNA processing factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBPMS, Length 1,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-203ENST00000339877 TNRQ92752 1358 aa27.58■■■□□ 2.01
RBPMS-203ENST00000339877 FBXO31Q5XUX0 539 aaPredicted RBP27.57■■■□□ 2
RBPMS-203ENST00000339877 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
RBPMS-203ENST00000339877 TOM1O60784 492 aa27.55■■■□□ 2
RBPMS-203ENST00000339877 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
RBPMS-203ENST00000339877 WASHC2CQ9Y4E1 1318 aa27.54■■■□□ 2
RBPMS-203ENST00000339877 FAM135AQ9P2D6 1515 aa27.53■■■□□ 2
RBPMS-203ENST00000339877 PZPP20742 1482 aa27.52■■■□□ 2
RBPMS-203ENST00000339877 CCDC141Q6ZP82 1450 aa27.52■■■□□ 2
RBPMS-203ENST00000339877 CPS1P31327 1500 aa27.52■■■□□ 2
RBPMS-203ENST00000339877 KDM5DQ9BY66 1539 aa27.52■■■□□ 2
RBPMS-203ENST00000339877 ANKLE2Q86XL3 938 aa27.52■■■□□ 2
RBPMS-203ENST00000339877 POLR1AO95602 1720 aaPredicted RBP27.52■■■□□ 2
RBPMS-203ENST00000339877 PIP4K2BP78356 416 aa27.5■■□□□ 1.99
RBPMS-203ENST00000339877 THEMISQ8N1K5 641 aaPredicted RBP27.5■■□□□ 1.99
RBPMS-203ENST00000339877 SHANK2Q9UPX8 1470 aa27.49■■□□□ 1.99
RBPMS-203ENST00000339877 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
RBPMS-203ENST00000339877 HSPA1LP34931 641 aa27.47■■□□□ 1.99
RBPMS-203ENST00000339877 CAMSAP2Q08AD1 1489 aa27.47■■□□□ 1.99
RBPMS-203ENST00000339877 MIA2Q96PC5 1412 aa27.47■■□□□ 1.99
RBPMS-203ENST00000339877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.46■■□□□ 1.992e-7■■□□□ 13.3
RBPMS-203ENST00000339877 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
RBPMS-203ENST00000339877 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
RBPMS-203ENST00000339877 NCOA2Q15596 1464 aa27.45■■□□□ 1.98
RBPMS-203ENST00000339877 NLRP1Q9C000 1473 aa27.45■■□□□ 1.98
RBPMS-203ENST00000339877 UGGT1Q9NYU2 1555 aa27.42■■□□□ 1.98
RBPMS-203ENST00000339877 NPHP4O75161 1426 aaPredicted RBP27.39■■□□□ 1.97
RBPMS-203ENST00000339877 MED14O60244 1454 aa27.38■■□□□ 1.97
RBPMS-203ENST00000339877 ARHGEF5Q12774 1597 aa27.37■■□□□ 1.97
RBPMS-203ENST00000339877 MED1Q15648 1581 aaPredicted RBP27.37■■□□□ 1.97
RBPMS-203ENST00000339877 DEPDC5O75140 1603 aa27.37■■□□□ 1.97
RBPMS-203ENST00000339877 VWDEQ8N2E2 1590 aa27.37■■□□□ 1.97
RBPMS-203ENST00000339877 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
RBPMS-203ENST00000339877 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
RBPMS-203ENST00000339877 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
RBPMS-203ENST00000339877 ZC3H13Q5T200 1668 aaKnown RBP27.27■■□□□ 1.96
RBPMS-203ENST00000339877 ABCC3O15438 1527 aa27.27■■□□□ 1.96
RBPMS-203ENST00000339877 MAST1Q9Y2H9 1570 aa27.25■■□□□ 1.95
RBPMS-203ENST00000339877 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
RBPMS-203ENST00000339877 ERVK-7P63135 1459 aa27.23■■□□□ 1.95
RBPMS-203ENST00000339877 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
RBPMS-203ENST00000339877 LRRC7Q96NW7 1537 aa27.22■■□□□ 1.95
RBPMS-203ENST00000339877 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
RBPMS-203ENST00000339877 SYNMO15061 1565 aa27.18■■□□□ 1.94
RBPMS-203ENST00000339877 STRCP1A6NGW2 1772 aa27.18■■□□□ 1.94
RBPMS-203ENST00000339877 SENP3Q9H4L4 574 aaPredicted RBP27.17■■□□□ 1.94
RBPMS-203ENST00000339877 VPS8Q8N3P4 1428 aa27.16■■□□□ 1.94
RBPMS-203ENST00000339877 MROH1Q8NDA8 1641 aa27.14■■□□□ 1.94
RBPMS-203ENST00000339877 SCAF11Q99590 1463 aaKnown RBP27.14■■□□□ 1.94
RBPMS-203ENST00000339877 UBR1Q8IWV7 1749 aa27.14■■□□□ 1.94
RBPMS-203ENST00000339877 TXNDC2Q86VQ3 553 aa27.14■■□□□ 1.93
RBPMS-203ENST00000339877 CEP152O94986 1710 aa27.13■■□□□ 1.93
RBPMS-203ENST00000339877 CFAP65Q6ZU64 1925 aaKnown RBP27.13■■□□□ 1.93
RBPMS-203ENST00000339877 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
RBPMS-203ENST00000339877 DUOX2Q9NRD8 1548 aa27.13■■□□□ 1.93
RBPMS-203ENST00000339877 LTKP29376 864 aa27.11■■□□□ 1.93
RBPMS-203ENST00000339877 EID1Q9Y6B2 187 aa27.11■■□□□ 1.93
RBPMS-203ENST00000339877 KANK4Q5T7N3 995 aaPredicted RBP27.1■■□□□ 1.93
RBPMS-203ENST00000339877 ARHGAP31Q2M1Z3 1444 aa27.09■■□□□ 1.93
RBPMS-203ENST00000339877 ARHGAP23Q9P227 1491 aa27.08■■□□□ 1.93
RBPMS-203ENST00000339877 SLIT1O75093 1534 aa27.08■■□□□ 1.93
RBPMS-203ENST00000339877 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
RBPMS-203ENST00000339877 KIF15Q9NS87 1388 aa27.05■■□□□ 1.92
RBPMS-203ENST00000339877 RRP7BPQ9NSQ0 103 aa27.03■■□□□ 1.92
RBPMS-203ENST00000339877 STAG3Q9UJ98 1225 aa27.03■■□□□ 1.92
RBPMS-203ENST00000339877 ERBINQ96RT1 1412 aa27.03■■□□□ 1.92
RBPMS-203ENST00000339877 PRDM15P57071 1507 aaPredicted RBP27.02■■□□□ 1.92
RBPMS-203ENST00000339877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.02■■□□□ 1.925e-6■■□□□ 14.4
RBPMS-203ENST00000339877 KANK1Q14678 1352 aa27■■□□□ 1.91
RBPMS-203ENST00000339877 TMEM2Q9UHN6 1383 aa26.99■■□□□ 1.91
RBPMS-203ENST00000339877 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
RBPMS-203ENST00000339877 ABCC5O15440 1437 aa26.97■■□□□ 1.91
RBPMS-203ENST00000339877 PIK3C2BO00750 1634 aa26.96■■□□□ 1.91
RBPMS-203ENST00000339877 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
RBPMS-203ENST00000339877 FAM135BQ49AJ0 1406 aa26.96■■□□□ 1.91
RBPMS-203ENST00000339877 RGS17Q9UGC6 210 aaPredicted RBP26.94■■□□□ 1.9
RBPMS-203ENST00000339877 CROCC2H7BZ55 1655 aa26.94■■□□□ 1.9
RBPMS-203ENST00000339877 IDI1Q13907 227 aa26.92■■□□□ 1.9
RBPMS-203ENST00000339877 KCNA6P17658 529 aa26.91■■□□□ 1.9
RBPMS-203ENST00000339877 TMEM94Q12767 1356 aa26.91■■□□□ 1.9
RBPMS-203ENST00000339877 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
RBPMS-203ENST00000339877 PTPN23Q9H3S7 1636 aa26.91■■□□□ 1.9
RBPMS-203ENST00000339877 APLP2Q06481 763 aa26.9■■□□□ 1.9
RBPMS-203ENST00000339877 KDM5AP29375 1690 aaKnown RBP26.9■■□□□ 1.9
RBPMS-203ENST00000339877 DAPK1P53355 1430 aa26.9■■□□□ 1.9
RBPMS-203ENST00000339877 PROSER2Q86WR7 435 aaPredicted RBP26.89■■□□□ 1.89
RBPMS-203ENST00000339877 SLC26A8Q96RN1 970 aa26.88■■□□□ 1.89
RBPMS-203ENST00000339877 ANKRD30AQ9BXX3 1397 aa26.88■■□□□ 1.89
RBPMS-203ENST00000339877 LMTK2Q8IWU2 1503 aa26.87■■□□□ 1.89
RBPMS-203ENST00000339877 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
RBPMS-203ENST00000339877 TET3O43151 1660 aa26.84■■□□□ 1.89
RBPMS-203ENST00000339877 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
RBPMS-203ENST00000339877 BCANQ96GW7 911 aa26.82■■□□□ 1.88
RBPMS-203ENST00000339877 SLC52A1Q9NWF4 448 aa26.82■■□□□ 1.88
RBPMS-203ENST00000339877 RBM33Q96EV2 1170 aaKnown RBP26.81■■□□□ 1.88
RBPMS-203ENST00000339877 NOS1P29475 1434 aa26.8■■□□□ 1.88
RBPMS-203ENST00000339877 ROBO1Q9Y6N7 1651 aa26.8■■□□□ 1.88
RBPMS-203ENST00000339877 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
RBPMS-203ENST00000339877 POTEAQ6S8J7 498 aa26.78■■□□□ 1.88
RBPMS-203ENST00000339877 ADGRB3O60242 1522 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms