RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 PTPRTO14522 1441 aa45.28■■■■■ 4.84
H2AFV-202ENST00000308153 CAMSAP1Q5T5Y3 1602 aa45.26■■■■■ 4.84
H2AFV-202ENST00000308153 CEP170BQ9Y4F5 1589 aaPredicted RBP45.24■■■■■ 4.83
H2AFV-202ENST00000308153 PTPN23Q9H3S7 1636 aa45.24■■■■■ 4.83
H2AFV-202ENST00000308153 CERKQ8TCT0 537 aa45.23■■■■■ 4.83
H2AFV-202ENST00000308153 RNF17Q9BXT8 1623 aaKnown RBP45.2■■■■■ 4.83
H2AFV-202ENST00000308153 PZPP20742 1482 aa45.19■■■■■ 4.82
H2AFV-202ENST00000308153 WASHC2CQ9Y4E1 1318 aa45.19■■■■■ 4.82
H2AFV-202ENST00000308153 FGD6Q6ZV73 1430 aa45.18■■■■■ 4.82
H2AFV-202ENST00000308153 ABCC5O15440 1437 aa45.18■■■■■ 4.82
H2AFV-202ENST00000308153 EIF2AK4Q9P2K8 1649 aaKnown RBP45.17■■■■■ 4.82
H2AFV-202ENST00000308153 SHANK2Q9UPX8 1470 aa45.16■■■■■ 4.82
H2AFV-202ENST00000308153 CROCC2H7BZ55 1655 aa45.15■■■■■ 4.82
H2AFV-202ENST00000308153 TCOF1Q13428 1488 aaKnown RBP45.15■■■■■ 4.82
H2AFV-202ENST00000308153 FBXO31Q5XUX0 539 aaPredicted RBP45.14■■■■■ 4.82
H2AFV-202ENST00000308153 PLA2R1Q13018 1463 aa45.13■■■■■ 4.82
H2AFV-202ENST00000308153 DUOX2Q9NRD8 1548 aa45.11■■■■■ 4.81
H2AFV-202ENST00000308153 A2ML1A8K2U0 1454 aa45.1■■■■■ 4.81
H2AFV-202ENST00000308153 TNRQ92752 1358 aa45.09■■■■■ 4.81
H2AFV-202ENST00000308153 MROH1Q8NDA8 1641 aa45.09■■■■■ 4.81
H2AFV-202ENST00000308153 DAPK1P53355 1430 aa45.09■■■■■ 4.81
H2AFV-202ENST00000308153 DNMT1P26358 1616 aaKnown RBP45.08■■■■■ 4.81
H2AFV-202ENST00000308153 ABCC3O15438 1527 aa45.07■■■■■ 4.81
H2AFV-202ENST00000308153 NCKAP5LQ9HCH0 1330 aa45.06■■■■■ 4.8
H2AFV-202ENST00000308153 KIF15Q9NS87 1388 aa45.05■■■■■ 4.8
H2AFV-202ENST00000308153 ZC3H13Q5T200 1668 aaKnown RBP45.04■■■■■ 4.8
H2AFV-202ENST00000308153 PKD2Q13563 968 aa44.99■■■■■ 4.79
H2AFV-202ENST00000308153 LTBP4Q8N2S1 1624 aa44.99■■■■■ 4.79
H2AFV-202ENST00000308153 ERBINQ96RT1 1412 aa44.96■■■■■ 4.79
H2AFV-202ENST00000308153 RRP7BPQ9NSQ0 103 aa44.96■■■■■ 4.79
H2AFV-202ENST00000308153 CEP152O94986 1710 aa44.91■■■■■ 4.78
H2AFV-202ENST00000308153 NLRP1Q9C000 1473 aa44.91■■■■■ 4.78
H2AFV-202ENST00000308153 PRDM15P57071 1507 aaPredicted RBP44.91■■■■■ 4.78
H2AFV-202ENST00000308153 SPATA31D1Q6ZQQ2 1576 aa44.9■■■■■ 4.78
H2AFV-202ENST00000308153 ERVK-7P63135 1459 aa44.85■■■■■ 4.77
H2AFV-202ENST00000308153 CHIC2Q9UKJ5 165 aa44.84■■■■■ 4.77
H2AFV-202ENST00000308153 ANKRD30AQ9BXX3 1397 aa44.83■■■■■ 4.77
H2AFV-202ENST00000308153 DEPDC5O75140 1603 aa44.83■■■■■ 4.77
H2AFV-202ENST00000308153 UGGT1Q9NYU2 1555 aa44.81■■■■■ 4.76
H2AFV-202ENST00000308153 ZNF335Q9H4Z2 1342 aaPredicted RBP44.79■■■■■ 4.76
H2AFV-202ENST00000308153 NEURL4Q96JN8 1562 aa44.79■■■■■ 4.76
H2AFV-202ENST00000308153 ADGRL2O95490 1459 aa44.78■■■■■ 4.76
H2AFV-202ENST00000308153 POLR1AO95602 1720 aaPredicted RBP44.78■■■■■ 4.76
H2AFV-202ENST00000308153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.77■■■■■ 4.761e-30■■■□□ 14.6
H2AFV-202ENST00000308153 ARHGAP31Q2M1Z3 1444 aa44.75■■■■■ 4.76
H2AFV-202ENST00000308153 IQSEC2Q5JU85 1478 aa44.75■■■■■ 4.75
H2AFV-202ENST00000308153 FAM50AQ14320 339 aaKnown RBP44.75■■■■■ 4.75
H2AFV-202ENST00000308153 THEMISQ8N1K5 641 aaPredicted RBP44.75■■■■■ 4.75
H2AFV-202ENST00000308153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP44.7■■■■■ 4.753e-6■□□□□ 11.3
H2AFV-202ENST00000308153 CFAP65Q6ZU64 1925 aaKnown RBP44.67■■■■■ 4.74
H2AFV-202ENST00000308153 VWDEQ8N2E2 1590 aa44.67■■■■■ 4.74
H2AFV-202ENST00000308153 ANKLE2Q86XL3 938 aa44.66■■■■■ 4.74
H2AFV-202ENST00000308153 KANK1Q14678 1352 aa44.65■■■■■ 4.74
H2AFV-202ENST00000308153 LMTK2Q8IWU2 1503 aa44.65■■■■■ 4.74
H2AFV-202ENST00000308153 MED14O60244 1454 aa44.62■■■■■ 4.73
H2AFV-202ENST00000308153 UBR1Q8IWV7 1749 aa44.58■■■■■ 4.73
H2AFV-202ENST00000308153 NPHP4O75161 1426 aaPredicted RBP44.56■■■■■ 4.72
H2AFV-202ENST00000308153 ANKRD50Q9ULJ7 1429 aa44.55■■■■■ 4.72
H2AFV-202ENST00000308153 EFCAB6Q5THR3 1501 aa44.49■■■■■ 4.71
H2AFV-202ENST00000308153 IQGAP1P46940 1657 aa44.48■■■■■ 4.71
H2AFV-202ENST00000308153 ARHGAP23Q9P227 1491 aa44.45■■■■■ 4.71
H2AFV-202ENST00000308153 PIK3C2BO00750 1634 aa44.44■■■■■ 4.7
H2AFV-202ENST00000308153 PPARGC1BQ86YN6 1023 aaKnown RBP44.44■■■■■ 4.7
H2AFV-202ENST00000308153 SLIT1O75093 1534 aa44.43■■■■■ 4.7
H2AFV-202ENST00000308153 CPS1P31327 1500 aa44.43■■■■■ 4.7
H2AFV-202ENST00000308153 SYNMO15061 1565 aa44.41■■■■■ 4.7
H2AFV-202ENST00000308153 ROCK1Q13464 1354 aa44.41■■■■■ 4.7
H2AFV-202ENST00000308153 NOS1P29475 1434 aa44.41■■■■■ 4.7
H2AFV-202ENST00000308153 SCAF11Q99590 1463 aaKnown RBP44.39■■■■■ 4.7
H2AFV-202ENST00000308153 LTKP29376 864 aa44.35■■■■■ 4.69
H2AFV-202ENST00000308153 UBAP1LF5GYI3 381 aa44.34■■■■■ 4.69
H2AFV-202ENST00000308153 IDI1Q13907 227 aa44.33■■■■■ 4.69
H2AFV-202ENST00000308153 UNC13BO14795 1591 aa44.33■■■■■ 4.69
H2AFV-202ENST00000308153 KDM5AP29375 1690 aaKnown RBP44.32■■■■■ 4.69
H2AFV-202ENST00000308153 RPRD2Q5VT52 1461 aaKnown RBP44.31■■■■■ 4.68
H2AFV-202ENST00000308153 TMEM2Q9UHN6 1383 aa44.3■■■■■ 4.68
H2AFV-202ENST00000308153 TET3O43151 1660 aa44.29■■■■■ 4.68
H2AFV-202ENST00000308153 TXNDC2Q86VQ3 553 aa44.29■■■■■ 4.68
H2AFV-202ENST00000308153 STRCP1A6NGW2 1772 aa44.26■■■■■ 4.68
H2AFV-202ENST00000308153 STAG3Q9UJ98 1225 aa44.24■■■■■ 4.67
H2AFV-202ENST00000308153 ITGAEP38570 1179 aa44.23■■■■■ 4.67
H2AFV-202ENST00000308153 ADGRB3O60242 1522 aa44.21■■■■■ 4.67
H2AFV-202ENST00000308153 EID1Q9Y6B2 187 aa44.21■■■■■ 4.67
H2AFV-202ENST00000308153 GCC2Q8IWJ2 1684 aa44.2■■■■■ 4.67
H2AFV-202ENST00000308153 SLC52A1Q9NWF4 448 aa44.2■■■■■ 4.67
H2AFV-202ENST00000308153 IQGAP3Q86VI3 1631 aa44.15■■■■■ 4.66
H2AFV-202ENST00000308153 RRBP1Q9P2E9 1410 aaKnown RBP44.15■■■■■ 4.66
H2AFV-202ENST00000308153 LRRC7Q96NW7 1537 aa44.14■■■■■ 4.66
H2AFV-202ENST00000308153 E9PCH4 1651 aa44.11■■■■■ 4.65
H2AFV-202ENST00000308153 ALKQ9UM73 1620 aa44.07■■■■■ 4.65
H2AFV-202ENST00000308153 TOM1O60784 492 aa44.07■■■■■ 4.65
H2AFV-202ENST00000308153 NUP155O75694 1391 aa44.05■■■■■ 4.64
H2AFV-202ENST00000308153 TMEM131LA2VDJ0 1609 aa44.01■■■■■ 4.64
H2AFV-202ENST00000308153 PIP4K2BP78356 416 aa44■■■■■ 4.63
H2AFV-202ENST00000308153 MYO5BQ9ULV0 1848 aa44■■■■■ 4.63
H2AFV-202ENST00000308153 ZFYVE9O95405 1425 aa43.99■■■■■ 4.63
H2AFV-202ENST00000308153 SCAF1Q9H7N4 1312 aaKnown RBP43.97■■■■■ 4.63
H2AFV-202ENST00000308153 DISP3Q9P2K9 1392 aa43.95■■■■■ 4.63
H2AFV-202ENST00000308153 SLC26A8Q96RN1 970 aa43.92■■■■■ 4.62
H2AFV-202ENST00000308153 RIMS2Q9UQ26 1411 aa43.9■■■■■ 4.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms