RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 SUB1P53999 127 aaKnown RBP eCLIP21.31■■□□□ 12e-9■■■■■ 72.4
H2AFV-202ENST00000308153 SF3B1O75533 1304 aaKnown RBP eCLIP31.75■■■□□ 2.672e-6■■■■■ 55.3
H2AFV-202ENST00000308153 AQRO60306 1485 aaKnown RBP eCLIP52.02■■■■■ 5.922e-7■■■■■ 32.8
H2AFV-202ENST00000308153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.62■■■□□ 2.498e-7■■■■■ 29.3
H2AFV-202ENST00000308153 EFTUD2Q15029 972 aaKnown RBP eCLIP26.98■■□□□ 1.911e-7■■■■■ 29.1
H2AFV-202ENST00000308153 DDX3XO00571 662 aaKnown RBP eCLIP29.26■■■□□ 2.273e-8■■■■□ 24.6
H2AFV-202ENST00000308153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.81■■□□□ 1.562e-6■■■■□ 24
H2AFV-202ENST00000308153 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.03■■■□□ 2.43e-6■■■■□ 23.9
H2AFV-202ENST00000308153 TIAL1Q01085 375 aaKnown RBP eCLIP27.52■■■□□ 25e-6■■■■□ 19.9
H2AFV-202ENST00000308153 U2AF2P26368 475 aaKnown RBP eCLIP32.04■■■□□ 2.722e-8■■■■□ 19.6
H2AFV-202ENST00000308153 NOLC1Q14978 699 aaKnown RBP eCLIP31.58■■■□□ 2.651e-22■■■□□ 19
H2AFV-202ENST00000308153 LARP4Q71RC2 724 aaKnown RBP eCLIP26.25■■□□□ 1.793e-7■■■□□ 18
H2AFV-202ENST00000308153 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.97■■■□□ 2.874e-23■■■□□ 14.9
H2AFV-202ENST00000308153 SF3B4Q15427 424 aaKnown RBP eCLIP26.25■■□□□ 1.791e-7■■■□□ 14.7
H2AFV-202ENST00000308153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.77■■■■■ 4.761e-30■■■□□ 14.6
H2AFV-202ENST00000308153 KHSRPQ92945 711 aaKnown RBP eCLIP32.35■■■□□ 2.771e-8■■■□□ 14.6
H2AFV-202ENST00000308153 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP47.42■■■■■ 5.182e-6■■□□□ 13.3
H2AFV-202ENST00000308153 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.32■■□□□ 1.81e-19■■□□□ 12
H2AFV-202ENST00000308153 FTOQ9C0B1 505 aaKnown RBP eCLIP33.2■■■□□ 2.911e-16■■□□□ 11.6
H2AFV-202ENST00000308153 TARDBPQ13148 414 aaKnown RBP eCLIP29.18■■■□□ 2.267e-13■■□□□ 11.4
H2AFV-202ENST00000308153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP44.7■■■■■ 4.753e-6■□□□□ 11.3
H2AFV-202ENST00000308153 RPS3P23396 243 aaKnown RBP eCLIP27.81■■■□□ 2.043e-6■□□□□ 11.1
H2AFV-202ENST00000308153 RBM22Q9NW64 420 aaKnown RBP eCLIP28.83■■■□□ 2.213e-6■□□□□ 11.1
H2AFV-202ENST00000308153 HNRNPMP52272 730 aaKnown RBP eCLIP46.18■■■■■ 4.983e-6■□□□□ 11
H2AFV-202ENST00000308153 XRCC6P12956 609 aaKnown RBP eCLIP32.1■■■□□ 2.733e-6■□□□□ 11
H2AFV-202ENST00000308153 NCBP2P52298 156 aaKnown RBP eCLIP26.24■■□□□ 1.792e-9■□□□□ 10.6
H2AFV-202ENST00000308153 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.38■■■□□ 2.133e-6■□□□□ 9.9
H2AFV-202ENST00000308153 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.06■■□□□ 1.924e-7■□□□□ 9.8
H2AFV-202ENST00000308153 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.89■■■■□ 3.188e-7■□□□□ 9.6
H2AFV-202ENST00000308153 EIF3GO75821 320 aaKnown RBP eCLIP19.94■□□□□ 0.786e-13■□□□□ 9.4
H2AFV-202ENST00000308153 NONOQ15233 471 aaKnown RBP eCLIP32.58■■■□□ 2.815e-6■□□□□ 8.7
H2AFV-202ENST00000308153 U2AF1Q01081 240 aaKnown RBP eCLIP38.65■■■■□ 3.788e-7■□□□□ 8.6
H2AFV-202ENST00000308153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP39.58■■■■□ 3.932e-6■□□□□ 8.4
H2AFV-202ENST00000308153 PABPC4Q13310 644 aaKnown RBP eCLIP35.01■■■■□ 3.27e-27■□□□□ 8.2
Retrieved 34 of 34 RNA–protein pairs in 8.8 ms