RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
RFC4-201ENST00000296273 RSPH4AQ5TD94 716 aa16.92■□□□□ 0.3
RFC4-201ENST00000296273 DNMT1P26358 1616 aaKnown RBP16.9■□□□□ 0.3
RFC4-201ENST00000296273 CCDC141Q6ZP82 1450 aa16.89■□□□□ 0.29
RFC4-201ENST00000296273 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
RFC4-201ENST00000296273 KIF3BO15066 747 aa16.88■□□□□ 0.29
RFC4-201ENST00000296273 PZPP20742 1482 aa16.87■□□□□ 0.29
RFC4-201ENST00000296273 TNRQ92752 1358 aa16.87■□□□□ 0.29
RFC4-201ENST00000296273 CPS1P31327 1500 aa16.85■□□□□ 0.29
RFC4-201ENST00000296273 CAMSAP2Q08AD1 1489 aa16.85■□□□□ 0.29
RFC4-201ENST00000296273 WASHC2CQ9Y4E1 1318 aa16.85■□□□□ 0.29
RFC4-201ENST00000296273 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
RFC4-201ENST00000296273 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
RFC4-201ENST00000296273 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.28
RFC4-201ENST00000296273 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
RFC4-201ENST00000296273 NLRP1Q9C000 1473 aa16.82■□□□□ 0.28
RFC4-201ENST00000296273 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
RFC4-201ENST00000296273 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
RFC4-201ENST00000296273 ANKLE2Q86XL3 938 aa16.82■□□□□ 0.28
RFC4-201ENST00000296273 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
RFC4-201ENST00000296273 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
RFC4-201ENST00000296273 TOM1O60784 492 aa16.81■□□□□ 0.28
RFC4-201ENST00000296273 MIA2Q96PC5 1412 aa16.81■□□□□ 0.28
RFC4-201ENST00000296273 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
RFC4-201ENST00000296273 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
RFC4-201ENST00000296273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
RFC4-201ENST00000296273 MED14O60244 1454 aa16.78■□□□□ 0.28
RFC4-201ENST00000296273 DEPDC5O75140 1603 aa16.77■□□□□ 0.28
RFC4-201ENST00000296273 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.27
RFC4-201ENST00000296273 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
RFC4-201ENST00000296273 ZC3H13Q5T200 1668 aaKnown RBP16.75■□□□□ 0.27
RFC4-201ENST00000296273 PIP4K2BP78356 416 aa16.75■□□□□ 0.27
RFC4-201ENST00000296273 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
RFC4-201ENST00000296273 VWDEQ8N2E2 1590 aa16.74■□□□□ 0.27
RFC4-201ENST00000296273 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
RFC4-201ENST00000296273 HSPA1LP34931 641 aa16.74■□□□□ 0.27
RFC4-201ENST00000296273 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
RFC4-201ENST00000296273 LRRC9Q6ZRR7 1453 aa16.72■□□□□ 0.27
RFC4-201ENST00000296273 ABCC3O15438 1527 aa16.71■□□□□ 0.27
RFC4-201ENST00000296273 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
RFC4-201ENST00000296273 MED1Q15648 1581 aaPredicted RBP16.7■□□□□ 0.26
RFC4-201ENST00000296273 VPS8Q8N3P4 1428 aa16.69■□□□□ 0.26
RFC4-201ENST00000296273 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
RFC4-201ENST00000296273 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
RFC4-201ENST00000296273 MYOM3Q5VTT5 1437 aa16.66■□□□□ 0.26
RFC4-201ENST00000296273 SYNMO15061 1565 aa16.66■□□□□ 0.26
RFC4-201ENST00000296273 DUOX2Q9NRD8 1548 aa16.65■□□□□ 0.26
RFC4-201ENST00000296273 MROH1Q8NDA8 1641 aa16.65■□□□□ 0.26
RFC4-201ENST00000296273 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.26
RFC4-201ENST00000296273 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
RFC4-201ENST00000296273 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
RFC4-201ENST00000296273 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
RFC4-201ENST00000296273 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
RFC4-201ENST00000296273 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
RFC4-201ENST00000296273 CEP152O94986 1710 aa16.61■□□□□ 0.25
RFC4-201ENST00000296273 SLIT1O75093 1534 aa16.61■□□□□ 0.25
RFC4-201ENST00000296273 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
RFC4-201ENST00000296273 ERBINQ96RT1 1412 aa16.6■□□□□ 0.25
RFC4-201ENST00000296273 ARHGAP23Q9P227 1491 aa16.6■□□□□ 0.25
RFC4-201ENST00000296273 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
RFC4-201ENST00000296273 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
RFC4-201ENST00000296273 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
RFC4-201ENST00000296273 EID1Q9Y6B2 187 aa16.58■□□□□ 0.24
RFC4-201ENST00000296273 LTKP29376 864 aa16.56■□□□□ 0.24
RFC4-201ENST00000296273 KANK1Q14678 1352 aa16.55■□□□□ 0.24
RFC4-201ENST00000296273 ABCC5O15440 1437 aa16.54■□□□□ 0.24
RFC4-201ENST00000296273 CROCC2H7BZ55 1655 aa16.54■□□□□ 0.24
RFC4-201ENST00000296273 RRP7BPQ9NSQ0 103 aa16.53■□□□□ 0.24
RFC4-201ENST00000296273 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
RFC4-201ENST00000296273 TMEM2Q9UHN6 1383 aa16.53■□□□□ 0.24
RFC4-201ENST00000296273 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.24
RFC4-201ENST00000296273 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
RFC4-201ENST00000296273 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.24
RFC4-201ENST00000296273 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.24
RFC4-201ENST00000296273 APLP2Q06481 763 aa16.51■□□□□ 0.23
RFC4-201ENST00000296273 DAPK1P53355 1430 aa16.51■□□□□ 0.23
RFC4-201ENST00000296273 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
RFC4-201ENST00000296273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.239e-7■■□□□ 11.9
RFC4-201ENST00000296273 LMTK2Q8IWU2 1503 aa16.5■□□□□ 0.23
RFC4-201ENST00000296273 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
RFC4-201ENST00000296273 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
RFC4-201ENST00000296273 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
RFC4-201ENST00000296273 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
RFC4-201ENST00000296273 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
RFC4-201ENST00000296273 IDI1Q13907 227 aa16.47■□□□□ 0.23
RFC4-201ENST00000296273 KCNA6P17658 529 aa16.46■□□□□ 0.23
RFC4-201ENST00000296273 TMEM94Q12767 1356 aa16.45■□□□□ 0.22
RFC4-201ENST00000296273 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
RFC4-201ENST00000296273 NOS1P29475 1434 aa16.44■□□□□ 0.22
RFC4-201ENST00000296273 TET3O43151 1660 aa16.43■□□□□ 0.22
RFC4-201ENST00000296273 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
RFC4-201ENST00000296273 ADGRB3O60242 1522 aa16.42■□□□□ 0.22
RFC4-201ENST00000296273 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
RFC4-201ENST00000296273 RGS17Q9UGC6 210 aaPredicted RBP16.41■□□□□ 0.22
RFC4-201ENST00000296273 CHIC2Q9UKJ5 165 aa16.41■□□□□ 0.22
RFC4-201ENST00000296273 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
RFC4-201ENST00000296273 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
RFC4-201ENST00000296273 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
RFC4-201ENST00000296273 NWD1Q149M9 1564 aa16.39■□□□□ 0.21
RFC4-201ENST00000296273 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms